Colossoma macropomum (tambaqui): 118797913
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Entry
118797913 CDS
T09004
Symbol
rfx1b
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118797913 (rfx1b)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Other basic domains
RF-X
118797913 (rfx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
118797913
NCBI-ProteinID:
XP_036413105
LinkDB
All DBs
Position
Unknown
AA seq
847 aa
AA seq
DB search
MATPGFAEDLQPSQPQGGSITTSKAVQQKTTPTATPQFLPEIQSPSSSAPSQTVPTARPS
QATPPGSQKKTVLAIPPQVTVAAVPYVASEIQSSASQSSNGQSTPQYIVVTVTEGSLHSN
DSVSDSSPPPTVQTGVPTHVVQQVQTVQQRSVVQTTVKSQTSQLGVANLHITPEISQVGQ
HVYPSQVQYVEGDGNYNNTAIRSSTYPYTDSTLYTQATPSGTYYEAPPTSTSQVPTPVTS
QPVSVTTGSGSGAAPMFSGGGTGVTVVTGGTSSSGAGGTGGGTSGGGAGSYVVQGGYMLS
GSQNYSPTPRASPATLQWLFDNYETAEGVSLPRCTLYCHYLLHCQEAKLEPVNAASFGKL
IRSVFMGLRTRRLGTRGNSKYHYYGLRIKSSSPLQRLMEDQQYLAMRQQPFSHKHKIKPV
QKVEGMTNGMAMGVGSGQGGGLVDISSQVQHYQQFLEASRSLPEFPDIDLQGKPLPDGIL
PEHIRAFQQLYREHCEAIVDVMVNLQFTLVETLWKSFWRFTEGPNNDMDMDLHGESEKRL
PKVCLVLLCKYEPVLRWSRNCDNTLYQTLVEILIPDVLRPIPSALTQAIRNCAKSLENWL
TSAMMNIPEEMVRIKVVCAGAFAQTLRRYTSLNHLAQAARAVLQNSAQITQMLNDLNRVD
FTNVQEQASWVCVCDERMVQRIEQDFKMTLQQQKSLEQWAAWLDGVVSQVLKPYSSSPGF
PKAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLVEHRVAQAKGETP
IAVMGELSSLSRNMDASDVEKEEEEEEDDESDEDQMCVMADSAAVAEESLEPPTKLARTD
PFNSAHN
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccagggtttgcagaggacctacagccctcccagccccaagggggtagcata
accacatccaaagctgtccagcagaaaaccacgcccactgccacgccccagttcctccca
gagatacagagcccttctagctccgccccttcgcagacagtccccactgctagacctagt
caggccacgcccccggggagccagaagaagacggttttggccatacctcctcaagtaacc
gtggcagcagtgccttatgttgcctcagagattcagagctccgcctcacagtccagcaat
ggccagagcacgccacagtacatagtggtcactgttaccgaagggtctctccattctaac
gattccgtgtcagactccagtccacctcctactgtccagacaggtgtgcccactcatgta
gttcaacaggtgcagactgtgcagcagaggtcagtggtgcagaccacagtgaaaagccag
actagccagctgggggttgccaacctgcacatcactcctgagatctctcaggtcgggcag
catgtgtaccccagccaggttcagtacgtggaaggtgatggcaactacaacaacacagcc
attcgttccagtacttatccatacacagactccaccctctacactcaggccacgccttct
ggcacgtactatgaagccccacccacgtccacctctcaggttcccacccctgtgacctct
cagccagtgtccgtgactacagggtcaggcagtggagcggcacccatgttctccggaggt
ggtacgggggtaaccgtggtgacaggtggcacctcctccagtggtgcgggcggaactggg
ggcgggaccagtggaggaggggcagggagttacgtggttcaggggggatacatgctgagt
ggaagccagaattactcccccaccccacgtgcctcacctgctactctgcagtggttgttt
gataattatgaaacagctgaaggtgtcagtcttcctcgctgcactctgtactgtcactac
ctgctgcactgtcaggaggccaagctggagcccgttaacgcagcgtccttcggcaagctc
atccgatctgtcttcatgggcttacgcaccaggcgcctggggaccagagggaactccaag
taccactactatgggcttcggatcaagagcagctcccccctgcaaaggctaatggaggac
cagcagtacctggccatgagacagcagcccttctcccataagcacaagataaagccggtg
cagaaagttgaaggaatgaccaacgggatggcgatgggggtgggctcaggacaggggggg
gggctggttgacatcagctctcaagttcagcactatcagcagtttttagaggcatcccgc
tctctgccagagtttccagatattgatctccaagggaagcccctgccagacggaattctt
ccagagcacattcgggcgttccagcagctctacagagaacactgcgaggctatcgtggat
gtgatggtgaacctgcagtttactctggtagagactctgtggaagagcttctggagattc
actgagggcccgaacaatgacatggatatggatcttcatggtgaatcagagaagcggttg
ccgaaggtatgtttggtgctgctgtgtaaatatgagcctgttttgcgctggagccgcaac
tgtgacaacaccctctaccagactctagtggaaatcctcattcctgatgtcctcagaccc
atacccagtgccttaacccaagctatccgaaactgtgccaaaagcttagagaactggctc
accagtgccatgatgaacataccagaggagatggtccgaatcaaggttgtgtgtgcagga
gcgtttgcacagactctgcgcaggtacacttctctgaatcacctggcccaggccgcccgg
gctgtgctgcagaactcagcccaaatcacccagatgctcaatgacctcaacagagtggac
ttcactaacgtacaggagcaggcatcgtgggtgtgcgtgtgtgatgagcggatggtgcag
cggatcgagcaggactttaagatgaccctgcagcagcagaagtctttggagcagtgggcg
gcctggctggacggagttgtctcccaggtcctaaagccctacagctccagcccgggattt
cccaaagctgctaaactctttctgctcaagtggagcttctacagctctatggtgatcagg
gatctgaccctgcgcagtgcggccagtttcggctctttccatctcatccgcctgctctat
gatgagtacatgtattacctggtggagcacagggtggcccaggccaaaggagaaacgcct
atcgctgtaatgggagagctttccagcctgagtcggaatatggatgcatcagacgttgag
aaagaagaggaggaagaggaggatgacgagagtgacgaagatcagatgtgcgttatggcc
gactcggctgctgtggcggaggagtctctggagccgcccaccaaactagccagaacggac
cccttcaacagcgcacacaactaa
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