Colossoma macropomum (tambaqui): 118798024
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Entry
118798024 CDS
T09004
Symbol
farsb
Name
(RefSeq) LOW QUALITY PROTEIN: phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118798024 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cmao01007
]
118798024 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmao03016
]
118798024 (farsb)
Enzymes [BR:
cmao01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
118798024 (farsb)
Amino acid related enzymes [BR:
cmao01007
]
Aminoacyl-tRNA synthetase
Class II (U)
118798024 (farsb)
Transfer RNA biogenesis [BR:
cmao03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118798024 (farsb)
Prokaryotic type
118798024 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
118798024
NCBI-ProteinID:
XP_036413221
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MPTVSVKRDLLFQALGRTYTDEEFDELCFEFGLELDEITSEKDIISREQGDQKAEGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKEKMEAPRYRRVSPANGDPQRLIITEETAGVRP
HAVAAVLRNITFTPERYESFIELQEKLHQNVCRKRTLVAIGTHDLDTVSGPFTYTAKAPD
DIRFRPLNQSQEYTATQLMSLYKTDSHLRHYLHIIEDEPLYPVIYDSNGIVLSMPPIING
DHSKISVNTKNVFIECTATDLTKAKIVLDMMVTMFSEYCAEPFTVEEAEVVYSDGRMFSY
PELAYRTENISADFINCRVGVNESAESIAQLLTRMCLRSEVSGDDGQIQVEIPPTRSDVI
HACDIMEDAAMAYGFNNITMTTPRTYTVANQLPLNKLTELLRMDLAAAGFTEALTFALCS
QEDIADKLGKNISETRAVHISNPKTAEFQVARTTLLPGLLKTVAANRKMPLPLKLFEISD
VVLKDETTDVGARNNRRLCAVYYNKTPGFEVIHGLLDRVMQLLEVRPGRKHGYYIQAAED
STFFPGRCAEIFSHGKSVGRLGVLHPDVISGFELTMPCSALEINIEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggtcagcgttaagcgggacctgctgttccaggcgctcggacggacctacact
gatgaagaatttgatgagctgtgcttcgagttcggcctggagctggatgagattacgtcg
gagaaggacataatcagccgtgagcagggcgaccagaaggctgaaggcgcctctgatgtg
attctgtataagatcgatgttccagctaaccgctatgacctgctgtgtctggagggtctg
gtcagagggctgcaggtcttcaaggagaaaatggaagccccccgttacagacgtgtcagt
ccggcgaatggggaccctcagcggctcatcatcacagaggagacggcgggcgtgagaccc
cacgctgtggccgcagtcttacgcaacatcaccttcacgccggagcgctacgagagcttc
atcgagctgcaggagaagctccatcagaacgtctgcaggaaaaggacgctggttgccata
ggaacccacgacctggacaccgtctcggggccgttcacctacacggccaaagcgcccgac
gacatccgcttcagacccctcaatcagagccaggagtacacggccactcagctcatgagc
ctctacaagacggacagtcacctgaggcattacctgcacatcattgaggacgagccgctc
taccccgtcatctacgacagcaacggcatcgtcctgtccatgccccccatcatcaacggg
gatcacagtaaaatctctgtgaacacgaagaacgttttcatcgagtgcacggcgacagac
ctcactaaggctaagatcgtgctggacatgatggtgacgatgttcagtgaatactgcgct
gagccgttcacggtcgaggaggccgaggtggtttattctgatgggaggatgttctcttat
ccagagctggcctacaggacagaaaacatttcagcagatttcatcaactgcagagtcggc
gtgaatgaatcagctgaaagtatcgcccagctgttgacccggatgtgcctgaggtcagag
gtcagcggtgacgatggtcagatccaggtggagatcccgcccactcgctctgatgtcatc
cacgcctgtgatatcatggaggacgctgccatggcgtacggcttcaacaacatcaccatg
acgacgccccgcacctacactgtagccaatcagcttcctctgaataagctgacggagttg
ttgaggatggacctggcagcagcaggatttactgaagctctcaccttcgctctgtgctct
caggaggatatagctgataaactgggaaagaacatctcagagacgagagccgtgcacatc
tccaaccccaaaactgcagaattccaggtggcgcggaccactctgttaccggggctcctg
aagactgtggctgctaacaggaagatgcccctccccctcaaactgtttgaaatctctgac
gtggtcctgaaggacgaaaccactgatgtaggtgctcggaataacaggcgtttgtgtgcc
gtctactacaacaagactccgggctttgaggtcatccatggccttctggaccgggtcatg
cagctgctggaggtcagaccgggccgtaaacatggctactacatccaggccgcagaggac
tccaccttcttccccggccgctgtgccgaaatcttctctcacggtaaaagcgtcggacgc
ctcggagtccttcaccccgacgtcatcagcggcttcgagctcaccatgccctgctccgcc
ctcgaaatcaacatcgaacccttcctgtga
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