Colossoma macropomum (tambaqui): 118798422
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Entry
118798422 CDS
T09004
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmao03037
]
118798422 (ift88)
Cilium and associated proteins [BR:
cmao03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
118798422 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_6
TPR_19
TPR_14
TPR_7
TPR_16
TPR_11
ANAPC3
TPR_9
TPR_17
ARM_TT21_5th
TPR_10
TPR_CcmH_CycH
TPR-S
ARM_TT21_4th
ARM_TT21_N
ARM_TT21_C
TPR_15
ARM_TT21_2nd
DUF6584
Coatomer_E
TPR_MalT
DUF5588
DUF2989
MIT
Consortin_N
HAT_PRP39_C
SPO22
TPR_4
RNPP_C
Como_LCP
Paf67
NTS_TR130
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
118798422
NCBI-ProteinID:
XP_036413762
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MENVHLAAEDEDDLYSGYNDYNPTFDSEELDNDVGFQQAVRTSHGRRPPMTARFPGTAVG
GRPIGTSFGSRMPMGSSMGRPTTGAVQDGAARPMTAVRAAGYSSSLTRGSTFDPLGQSRG
PAPPLEAKNEDTPEEKIKILEKKVNDLIEESCLAQGNGDLQLALEKAKEAGRKERALVRQ
REQTGTADHITLDLTYSVLFNLANQYANNDMNTEALNTYQVIVKNKMFNNAGRLKVNMGN
IYFKQKNYPKAIKFYRMALDQISNAHTEMRIKIMQNIGVSFIRMGQYSDAITSFDHIMSE
SPNIKTGFNLILCYCAIGDRERMKKSFQKLICVPLGIDEEDKYISPNDDPHANLLIEAIK
NDQLHQMERERKALAEKYIMTSAKLIAPAIESTFAAGFDWCVDMVKSSQYVELANDLEIN
KAITYLRQKEFNQAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYADLAMNAD
RYNPAALINKGNTVFVKEDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLGRLEEALDC
FLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLISVTPTDPHVLAKLGELYDNEG
DKSQAFQYYYESFRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERATLIQPNHVVWQLMV
ASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLKEVQDYATKLKKVEKMK
EIREQRVKSGRESSARGRREGSASSDSGQSSHGASAKGERLSVKLRSLPGSNEPYEASSQ
RDLDASYVDPLGPQMERPKTAAKKRTEEDEFADEELGDDLLPE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgttcatcttgccgcagaagacgaagatgacttgtactcgggttacaatgac
tacaatccaacatttgactcagaggagctggacaatgatgttggctttcagcaagccgtc
aggaccagtcatggcagacgacctccaatgactgcaaggtttcctggcactgccgttggt
ggaagacccataggaacctcttttggttcacggatgcccatgggctcttcaatgggaaga
cctacaactggagcagtacaggatggggctgctcgtcctatgactgcagtgcgggcagca
ggatattcctcctctttgaccagaggttcaacatttgatccacttggtcaatcaagagga
ccagctcctccattagaagcaaaaaatgaagacactccagaggagaagattaagattctg
gaaaagaaggtgaatgatttgatagaagaaagttgcttagcccaaggaaatggggatctg
caactggctctagaaaaggccaaagaagcaggtagaaaagagcgggcattggtgagacaa
agagaacaaactggtactgcagaccatatcactttggatctgacctattcagtgctgttt
aatctggcaaaccagtatgccaataatgacatgaacacagaggccttgaacacttaccag
gtcattgtgaagaacaagatgttcaataatgcaggacggttgaaagtcaacatgggtaac
atctactttaaacagaaaaactatccaaaggcaattaaattttaccgtatggctttagac
caaatctccaatgcacacacagagatgaggatcaagatcatgcagaacatcggtgtttct
tttatacgaatgggccagtactcagatgccattacctcctttgatcatattatgagtgag
agccccaacataaagacaggcttcaacctaatcctctgctactgtgccattggagatcgt
gagaggatgaagaaatctttccagaaactgatttgtgtacctcttggaattgatgaggaa
gacaagtatatctctccaaatgatgaccctcatgcaaacttattgatagaagccatcaag
aatgatcagctgcaccaaatggagcgagaaaggaaagcattagctgagaagtacatcatg
acctcagcaaagcttattgccccagccattgagtccacttttgcagctggatttgactgg
tgtgtagatatggttaaaagttcacagtatgtggagctggcgaatgatctagagatcaac
aaagcaatcacctatctgagacagaaggagttcaaccaggctgtggagacgctaaagact
tttgagaagaaagacagccgggtgaagagcgctgctgctactaacctttccttcctctac
tttttggagaaagactatgatcaagctgaccgctatgcagatctggccatgaatgctgac
cgctacaaccctgctgcacttattaacaaaggcaacacagtatttgtgaaggaggactat
gagaaagcagctgagttctataaagaagctttgcggaatgactcttcctgcacagaggct
ctctataacttaggattgacctataagagactgggacggctggaagaagccctggactgc
tttctgaagctccacgccatacttaggaacagtgctcaagtcatgtatcagctggccaac
ctatatgagatgttggaggaccctcaccaggctatcgaatggctcatgcagctcatcagt
gtcactcccactgatcctcatgtgctggcgaaactgggagagttgtatgacaacgagggc
gataagtcacaagcctttcagtactattatgagtcttttagatattttccctcaaacatt
gaggtcattgaatggttgggagcatattatattgatacgcagttctgtgaaaaggcaatt
cagtactttgagagagcaacgctcatacagcccaaccacgttgtatggcagctgatggta
gctagctgctacaggaggagtggaaattatcagaaagcacttgagacgtataaggacatt
catcggaaattcccggaaaatgtagaatgtcttcgattccttgtgagattatgcacagat
atgggcttaaaggaggtgcaggattatgccaccaaactgaagaaagtggaaaaaatgaag
gagatcagagagcagagggtgaagtcggggagagaaagcagtgctcgaggtcggagagaa
ggcagtgccagcagtgacagtggacagagcagtcatggtgccagtgccaagggtgagcgg
ctgagtgtgaagctgaggtcacttccaggatccaatgaaccatatgaagcaagctcccaa
agagatttagatgcttcttatgttgatcccttgggaccgcaaatggagagaccaaagact
gcagcgaagaagcgcacagaggaagacgagtttgcagatgaagagctgggggatgactta
ctgccagagtga
DBGET
integrated database retrieval system