KEGG   Colossoma macropomum (tambaqui): 118798422
Entry
118798422         CDS       T09004                                 
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog
  KO
K16474  intraflagellar transport protein 88
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cmao03037]
    118798422 (ift88)
Cilium and associated proteins [BR:cmao03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   118798422 (ift88)
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_12 TPR_8 TPR_6 TPR_19 TPR_14 TPR_7 TPR_16 TPR_11 ANAPC3 TPR_9 TPR_17 ARM_TT21_5th TPR_10 TPR_CcmH_CycH TPR-S ARM_TT21_4th ARM_TT21_N ARM_TT21_C TPR_15 ARM_TT21_2nd DUF6584 Coatomer_E TPR_MalT DUF5588 DUF2989 MIT Consortin_N HAT_PRP39_C SPO22 TPR_4 RNPP_C Como_LCP Paf67 NTS_TR130 FumaraseC_C
Other DBs
NCBI-GeneID: 118798422
NCBI-ProteinID: XP_036413762
LinkDB
Position
Unknown
AA seq 823 aa
MENVHLAAEDEDDLYSGYNDYNPTFDSEELDNDVGFQQAVRTSHGRRPPMTARFPGTAVG
GRPIGTSFGSRMPMGSSMGRPTTGAVQDGAARPMTAVRAAGYSSSLTRGSTFDPLGQSRG
PAPPLEAKNEDTPEEKIKILEKKVNDLIEESCLAQGNGDLQLALEKAKEAGRKERALVRQ
REQTGTADHITLDLTYSVLFNLANQYANNDMNTEALNTYQVIVKNKMFNNAGRLKVNMGN
IYFKQKNYPKAIKFYRMALDQISNAHTEMRIKIMQNIGVSFIRMGQYSDAITSFDHIMSE
SPNIKTGFNLILCYCAIGDRERMKKSFQKLICVPLGIDEEDKYISPNDDPHANLLIEAIK
NDQLHQMERERKALAEKYIMTSAKLIAPAIESTFAAGFDWCVDMVKSSQYVELANDLEIN
KAITYLRQKEFNQAVETLKTFEKKDSRVKSAAATNLSFLYFLEKDYDQADRYADLAMNAD
RYNPAALINKGNTVFVKEDYEKAAEFYKEALRNDSSCTEALYNLGLTYKRLGRLEEALDC
FLKLHAILRNSAQVMYQLANLYEMLEDPHQAIEWLMQLISVTPTDPHVLAKLGELYDNEG
DKSQAFQYYYESFRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERATLIQPNHVVWQLMV
ASCYRRSGNYQKALETYKDIHRKFPENVECLRFLVRLCTDMGLKEVQDYATKLKKVEKMK
EIREQRVKSGRESSARGRREGSASSDSGQSSHGASAKGERLSVKLRSLPGSNEPYEASSQ
RDLDASYVDPLGPQMERPKTAAKKRTEEDEFADEELGDDLLPE
NT seq 2472 nt   +upstreamnt  +downstreamnt
atggaaaacgttcatcttgccgcagaagacgaagatgacttgtactcgggttacaatgac
tacaatccaacatttgactcagaggagctggacaatgatgttggctttcagcaagccgtc
aggaccagtcatggcagacgacctccaatgactgcaaggtttcctggcactgccgttggt
ggaagacccataggaacctcttttggttcacggatgcccatgggctcttcaatgggaaga
cctacaactggagcagtacaggatggggctgctcgtcctatgactgcagtgcgggcagca
ggatattcctcctctttgaccagaggttcaacatttgatccacttggtcaatcaagagga
ccagctcctccattagaagcaaaaaatgaagacactccagaggagaagattaagattctg
gaaaagaaggtgaatgatttgatagaagaaagttgcttagcccaaggaaatggggatctg
caactggctctagaaaaggccaaagaagcaggtagaaaagagcgggcattggtgagacaa
agagaacaaactggtactgcagaccatatcactttggatctgacctattcagtgctgttt
aatctggcaaaccagtatgccaataatgacatgaacacagaggccttgaacacttaccag
gtcattgtgaagaacaagatgttcaataatgcaggacggttgaaagtcaacatgggtaac
atctactttaaacagaaaaactatccaaaggcaattaaattttaccgtatggctttagac
caaatctccaatgcacacacagagatgaggatcaagatcatgcagaacatcggtgtttct
tttatacgaatgggccagtactcagatgccattacctcctttgatcatattatgagtgag
agccccaacataaagacaggcttcaacctaatcctctgctactgtgccattggagatcgt
gagaggatgaagaaatctttccagaaactgatttgtgtacctcttggaattgatgaggaa
gacaagtatatctctccaaatgatgaccctcatgcaaacttattgatagaagccatcaag
aatgatcagctgcaccaaatggagcgagaaaggaaagcattagctgagaagtacatcatg
acctcagcaaagcttattgccccagccattgagtccacttttgcagctggatttgactgg
tgtgtagatatggttaaaagttcacagtatgtggagctggcgaatgatctagagatcaac
aaagcaatcacctatctgagacagaaggagttcaaccaggctgtggagacgctaaagact
tttgagaagaaagacagccgggtgaagagcgctgctgctactaacctttccttcctctac
tttttggagaaagactatgatcaagctgaccgctatgcagatctggccatgaatgctgac
cgctacaaccctgctgcacttattaacaaaggcaacacagtatttgtgaaggaggactat
gagaaagcagctgagttctataaagaagctttgcggaatgactcttcctgcacagaggct
ctctataacttaggattgacctataagagactgggacggctggaagaagccctggactgc
tttctgaagctccacgccatacttaggaacagtgctcaagtcatgtatcagctggccaac
ctatatgagatgttggaggaccctcaccaggctatcgaatggctcatgcagctcatcagt
gtcactcccactgatcctcatgtgctggcgaaactgggagagttgtatgacaacgagggc
gataagtcacaagcctttcagtactattatgagtcttttagatattttccctcaaacatt
gaggtcattgaatggttgggagcatattatattgatacgcagttctgtgaaaaggcaatt
cagtactttgagagagcaacgctcatacagcccaaccacgttgtatggcagctgatggta
gctagctgctacaggaggagtggaaattatcagaaagcacttgagacgtataaggacatt
catcggaaattcccggaaaatgtagaatgtcttcgattccttgtgagattatgcacagat
atgggcttaaaggaggtgcaggattatgccaccaaactgaagaaagtggaaaaaatgaag
gagatcagagagcagagggtgaagtcggggagagaaagcagtgctcgaggtcggagagaa
ggcagtgccagcagtgacagtggacagagcagtcatggtgccagtgccaagggtgagcgg
ctgagtgtgaagctgaggtcacttccaggatccaatgaaccatatgaagcaagctcccaa
agagatttagatgcttcttatgttgatcccttgggaccgcaaatggagagaccaaagact
gcagcgaagaagcgcacagaggaagacgagtttgcagatgaagagctgggggatgactta
ctgccagagtga

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