Colossoma macropomum (tambaqui): 118798562
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Entry
118798562 CDS
T09004
Symbol
mex3a
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118798562 (mex3a)
04121 Ubiquitin system [BR:
cmao04121
]
118798562 (mex3a)
Enzymes [BR:
cmao01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118798562 (mex3a)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118798562 (mex3a)
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118798562 (mex3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
KH_2
zf-RING_2
zf-C3HC4
RING_XB3-XBAT31
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
118798562
NCBI-ProteinID:
XP_036413834
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MPSLLLLAGIMEKNGGYGGDLAASGFGAEGLLAPPPDDDEDESRALRVALGQLSLLGLGE
GEDGAVQERSSGGGGGGSSNNNGGSTHQPGHGSNGGAGGGGGGGDAGILQSKSKLCALYD
GSASETKARGCNITECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFLI
TGRKEDVALARREIISAAEHFSMLRASRNKLGVSFNGSPPTPLPGQTTIQVRVPYRVVGL
VVGPKGSTIKRIQQQTCTYIVTPSRDSDPVFEITGSPGNAERAREEIEAHIAFRTGGLHD
HNNENDCLGPESSNGGLESRLQQVWGLQGGQRKPLTSSYRQNFSDAIVGSSGGGGGGSGI
YSKGDFPTPNNGDKPCSYFGSEGSQSWGDPDYPKQVAYYVQQRSKSFGGLPLPLTRLSPG
LPEPCGTGGSSTTVGSPHAQARRAHSEPTSASTPFAGRLPVPDSPPAVARDCMTCFESKV
TAALVPCGHNLFCMECAIRICELNHPECPVCHTLVTQAIRIFS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcctgctgctcctagcagggatcatggagaagaacgggggctacggcggggac
ctggccgcctcgggcttcggcgccgagggcctcctcgcgccgccgccggacgacgacgag
gacgagtcgcgggcgctccgcgtggctctcggccagctctccctgctggggctcggggaa
ggcgaggacggggcggttcaggagcgaagcagcggtggtggtggtggcgggagtagcaac
aacaacgggggaagcacgcatcagcccgggcacggcagcaacggaggcgccggaggagga
ggaggtggaggagacgcgggcatcctgcagagcaagagcaagttgtgtgcgctgtacgac
ggctcggccagcgagacgaaggcgcggggctgcaacatcaccgagtgcgttcctgtgcca
agctccgagcatgtggctgagatagtgggcaggcaaggttgcaaaatcaaagccttgcga
gcgaagaccaatacttatatcaaaaccccagtccggggtgaagagccggtctttctcatt
actggccgtaaggaagatgtggcgctagctaggcgtgagatcatctctgcagcagagcac
ttctccatgctgagggcctccaggaacaagctgggcgtctccttcaacggctcacctcca
actccactgcctggccagactaccatccaggtgcgggtgccctaccgggtggtgggtctg
gtggtagggcccaagggctccaccatcaagcgcatccagcagcaaacgtgcacctatatc
gttacgcccagccgtgacagtgaccctgtcttcgagatcaccggttctccagggaacgcg
gagcgggcacgtgaggaaatcgaggcgcacatcgccttccgcaccggcggtctgcatgac
cacaacaatgagaacgactgcctgggccctgagagtagcaacgggggtctggagagccgc
ctgcagcaggtgtgggggctgcaggggggccagcgcaagccgctcaccagcagctaccgc
cagaatttctccgacgccatagttggaagtagtgggggcggaggaggaggcagcgggatt
tacagtaagggtgatttccccactcccaacaacggtgacaagccatgctcttatttcggt
tcagaaggctcccagagctggggggaccccgactatcccaaacaggtggcctactacgtc
cagcagcgctccaaaagcttcggaggcctgcccctccctctgaccagactgtcgcccggc
cttccggagccctgtggaaccggtggcagctccactactgtcgggtctccccacgcccag
gcacgccgcgcccacagcgagcccacttccgcctcgacaccatttgctggccgcctccca
gtgccggactcaccacctgctgtggcccgggactgcatgacctgctttgagagcaaggtg
acagccgctctggtcccctgtggccacaacctcttctgcatggagtgtgccattcgaatc
tgtgagctaaatcatcctgaatgccctgtttgccacaccctcgtcacacaggctatccga
atcttctcttaa
DBGET
integrated database retrieval system
