Colossoma macropomum (tambaqui): 118798587
Help
Entry
118798587 CDS
T09004
Symbol
spata13
Name
(RefSeq) uncharacterized protein spata13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118798587 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118798587 (spata13)
Membrane trafficking [BR:
cmao04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118798587 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_2
SH3_1
PH
SH3_9
DUF1604
DUF3104
Motif
Other DBs
NCBI-GeneID:
118798587
NCBI-ProteinID:
XP_036413871
LinkDB
All DBs
Position
Unknown
AA seq
1296 aa
AA seq
DB search
MQKLCISGNRWRNCTTASPSDGASSLGEASLCYSSHGCHDIDPEAPGRPIRSSFHVEKLT
NPVTSCGAQVRPVLSEACCEKRGLNGLNSQTWSSSVITDGQTKPCPTRIVRIFSSQRKCG
MVGPEQTPLRGPASGPQAWPGLSGLRVMGSFKKLRSSVLQGIQNRGSAMGASKDKDFSSI
TSEDGSGFLVTKRDPGQVVGGSQSSSKEIPTVTNGVSTAGRKVSDEEDDYGEDGEGPQRN
SHFSRSIRRAYGVGRISLLDNGARKPDSLTVQEPASQRRPCSSVEPIGPDVILDPEENVK
ALSRLSKSADNLHFKSPFKRKAPSAQPQSPKAFGTPNIQRAASASSVDMRERGTGWRKSP
MGMRGQMLKLVGSLTDISANRKASPCPSPKDTLSALSQLHDDYSRRTPCAPPSERQRRPA
PANTRASERQKVQADIHRYTPALNPTPPVPILFSSSHNEAVEHSSPKAQFSGSHEQLPST
SPGSPLHILLSPLTGNCGTVEEQQYVKTEHCMIPSQEQTLNSIKVNLECIWKTPERDAGN
LEAASSEDTAADLLKLNNEKYNDTVFASPPVTPTCASESPMATTPTSPASGSDTPTSSVP
RRRAGRSRPRPISDYGQLVCRKYSIPEEEMELQAEEMDYTSQEDCNSNGACPERGSQENG
HVNVHFDNKKTRPISVIGGVDLFASPDDKEDTDSLPSRVPRPPLPSHGVPPYRAVSARLR
PCVFSQSTPTGLDRVGRHKLHRILSDGSCPGQDDSVSEEDGSFDELTEGTPYLQPEVNLS
TLNQCIMSGHAVYAEALWDHVTMGEQELAFKAGDVIRVLDAQEKDWWWGMVGEREAWFPS
SFVRVRVNQEDSGSESVESSLDQEEPLSKEPRSQSSEHRKQMRANVVQEIMNTERVYIKH
LRDICEGYIRQCRKHPDMFTEAQLKTIFSNIEEIYKFQRKFLKDLEKKYNKENPHLSEIG
SCFLQQGDGFSIYSEYCNTHPAACVELQRLMKQGRYKHFFEACRLLQQMIDISIAGFLLT
PVQKICKYPLQLGELLKYTPKDHSDYEGVCNAHEAMKNVASLINERKRRLESIDTIAHWQ
VAILDWEGDDVLSRSSELIHSGELTRVVRAGKTQQRSFFLFDHQLVFCKKDVLRRDLLHY
RGRLDTDHMEPLELQDGRHPELGSLRNAFALRHAENLEVLCVLCCRKAQDKQRWLQAFAR
ERRRVKEDQEIGMEISETQRKQAIQNARKSKQGKLKNINYSGHPVPLHHQPLHPLHQRHV
TVPTSIPQQQVFSLAEPKRKPSHLWYTFTRTALFRK
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaactttgcatttctggaaaccggtggagaaactgcaccacggcatctccgtca
gatggagcttcgtctcttggcgaagcctctctgtgttactcgtcacatggctgtcatgac
attgaccctgaagccccagggaggcctatccgcagctctttccatgtggagaagctgacg
aatccagttactagctgtggagcccaggtgcggcctgtcctctctgaggcatgctgtgag
aaacgtgggctcaacggactgaactcccagacctggtccagctctgtgatcactgacgga
cagactaagccatgcccaaccagaattgtgcgcattttttcctcccagcgcaagtgcggc
atggtaggccctgagcagactccacttcgaggcccagccagtggcccgcaggcttggcct
ggcctctcgggtctccgggtcatgggctctttcaagaagctgcgctcctctgtgctccaa
ggcatccagaacaggggcagtgcaatgggagccagcaaagacaaagacttctcctccata
accagtgaggatggcagtggtttcttggtaaccaaacgagatcctggtcaggttgttgga
ggcagtcagagcagttctaaggagatacccacagtgaccaatggagtatcgacagctgga
cggaaagtttcagatgaggaggatgattatggggaggatggtgaaggtccacagaggaac
tctcatttctcaaggagtatacgcagggcctacggagtaggacgtatctccttgttggac
aatggagcaaggaagccagatagcctcaccgttcaagaacctgcttctcaacgccgtccc
tgtagctctgtggaacccattgggcctgatgtgattcttgaccctgaagagaatgtcaag
gctttgagcagactaagcaaaagtgctgacaacttgcatttcaaaagccctttcaaacgt
aaagccccctcagctcagccccagagtcccaaagcttttggcaccccaaatatccagaga
gcagctagcgcttcttccgttgacatgcgggaacgtggaacaggctggcgcaaaagcccc
atgggaatgcggggacaaatgctaaaacttgtcggtagtttaacagatatttcagccaat
cgcaaggcaagtccttgtcccagccccaaggacacgttgtcagctctcagccagctccat
gatgactactcccgtaggaccccctgtgccccccctagcgagcgccagcgcaggcctgca
ccagcgaacacccgggcctctgaaaggcagaaagtacaagcggacattcatagatacacc
ccagccctaaaccccacccccccagtacccatcctctttagctcctctcacaacgaggca
gtggagcattccagccccaaagcacagttctctggttcccatgagcagctcccatcgact
tcaccaggttcacctttgcatattcttcttagccctctcacagggaattgtgggactgtg
gaggagcaacagtatgtgaaaactgagcactgcatgatccccagtcaggaacagacactg
aacagcattaaagtaaacttagagtgtatatggaagactccagagagagacgctggaaat
ctagaggcagcatcatcagaggacacagctgcagatcttctaaagctaaataatgagaaa
tacaacgacactgtctttgctagtcctcctgtcacacccacctgtgcctcagagtcacct
atggcaaccacaccaacctcaccagcctctggcagtgacacaccaacttcttctgtgccc
aggagaagagcgggtagatccagacctcgaccaatctcggattacggccagctggtttgt
aggaagtattctatccctgaagaggaaatggaacttcaggcagaggagatggactacact
tctcaggaggactgcaacagcaatggggcatgccctgaaaggggcagccaagagaatggc
catgtgaatgtacatttcgataacaagaaaacgcgacccatttcagttattggaggagtg
gatctgtttgcctctcctgatgataaagaagacacggatagtctcccttctcgtgttcct
cggccccctttgccctctcatggcgttcctccttacagggcagtgtctgcccgcctgcgc
ccctgcgtcttctcccagagcacccccacagggttggacagggtgggacgccacaaactg
catagaatcctcagtgatggaagctgtccaggacaggacgacagtgtgagtgaggaggat
ggcagttttgatgagcttactgaaggaacaccgtatctgcagccagaggtcaatctgtca
actctcaaccagtgcatcatgtcaggccatgctgtgtacgctgaggccttgtgggaccac
gtcacgatgggtgaacaggagctggcctttaaggccggggatgtaatccgggtgctggat
gcccaggagaaggactggtggtgggggatggtgggcgagcgcgaggcctggttcccctcc
agctttgtgcgagtgcgtgtgaatcaggaggattcaggcagtgaaagtgtggagagttct
ctggatcaggaggagccgctgtctaaagagccccgcagccagagctctgagcaccgaaag
cagatgagggccaatgtggtccaggagatcatgaacaccgagcgcgtctacatcaaacac
ctcagagacatctgtgaggggtatatccgtcagtgcaggaaacacccggatatgttcaca
gaagcacagcttaagacaatcttcagcaacattgaagagatctacaaattccaacgaaag
tttctcaaagatctagaaaagaaatacaacaaagaaaaccctcatctgagcgagataggc
tcctgcttccttcagcagggtgatggtttctctatatactctgaatactgtaacacacac
ccagcagcctgtgtagagctgcagcgtctgatgaagcagggacgttacaagcacttcttt
gaggcctgtcgtctcctgcagcagatgatagacatttcaatcgctggtttcctgctcacg
cctgtgcagaaaatctgcaaatatcctcttcagctgggcgagctactcaaatacacacct
aaagaccacagtgactacgaaggggtgtgcaatgcccatgaggccatgaagaatgtggcc
agtctgattaatgagaggaagagaaggctggagagtatcgacaccatcgcccactggcag
gtggccatcctagattgggagggtgacgatgtgttgtcacggagctctgagctgattcat
tcaggtgagctgacgcgggtggtgcgggccggtaagacacagcagcgcagcttcttcctg
ttcgaccatcagctggttttctgtaagaaggatgtgctgcggcgggacctgctgcactac
agagggcgtctggacactgaccacatggagccactggagctgcaggatggacggcaccca
gaactgggctcgcttcggaacgccttcgccctgcgccatgcggaaaacctggaggtgctg
tgcgtgctgtgctgcaggaaggcccaggacaagcagcgctggctgcaggcattcgcccgc
gagcgcaggcgtgtgaaggaagaccaggagattgggatggagattagtgaaacacaaagg
aagcaagcaattcaaaatgccagaaaatcaaagcaaggcaagctgaaaaacataaattac
tctggccaccccgtccctctccatcaccaacccctgcacccactccaccagcgccatgtt
accgtgccaaccagtatcccacagcaacaggtcttctccttagcggaaccaaagcgtaaa
ccctcccatctgtggtacaccttcacgcgcacagccctgttcagaaaatga
DBGET
integrated database retrieval system
