Colossoma macropomum (tambaqui): 118798877
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Entry
118798877 CDS
T09004
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118798877 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118798877 (trip13)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
118798877 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_24
AAA_25
AAA_14
ATPase_2
KAP_NTPase
AAA_18
TIP49
AAA_5
DUF815
AAA_28
AAA_17
RNA_helicase
NACHT
RuvB_N
AAA_13
NPHP3_N
Viral_helicase1
AAA_7
ATPase
bpMoxR
TsaE
ABC_tran
Mg_chelatase
Cytidylate_kin
IstB_IS21
AAA_30
SLFN-g3_helicase
AAA_11
AAA_19
AAA_33
PduV-EutP
Parvo_NS1
Rad17
nSTAND1
NTPase_1
RsgA_GTPase
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
118798877
NCBI-ProteinID:
XP_036414376
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MNGEKMEVGWNHHQQPAEDGVTDRIDIHIEVLVKSESTVRRSEVRTHVLALLDRHSLIIG
SYKWTEFDDEFLTKNVESVAVVDVDVPAPLDLKMNNLCVHIFSLNDDGPSTLNLEEEEEL
SAANHWLLPAAELHGIWESLIYEEAIKTQLLDYVSTAIFFSDKNVDSNLVTWNRVVLLYG
PPGTGKTSLCKALAQKLSIRMSGRYSYGQFVEINSHSLFSKWFSESGKLVTKMFQKIQEL
IDDKEALVFVLIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLDQIKRYPNVVILTTS
NVTEKIDLAFVDRADIKQYIGPPSASAIFSIYLSCLEELMKRQIIYPRQQLLNLEELRTM
GYIESDVTELSLYLQRIAKKSVGLSGRTLRKIPFLAHALYAKTSVLTVESFLDAMDKAVV
QQLKERETLANCL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagagaagatggaagttggctggaatcaccaccagcagcctgctgaggacggc
gtcactgaccgaatcgatatccacattgaggttcttgtgaagtctgaaagcactgtgaga
aggtctgaagtgaggacacacgttttggctctgctggaccgacacagcctgattattggg
tcttacaagtggaccgagttcgacgatgagtttctgactaaaaatgttgagtcagttgcc
gtggtggacgtcgatgtaccggcacctctggatctgaagatgaacaatctttgtgttcac
atcttctccctgaatgatgacggacccagcacactaaacctggaggaagaggaggagctt
tctgcagccaatcactggctcctaccagcagctgagcttcatggcatttgggaaagcttg
atttatgaggaagcaatcaagacgcaactcttggattacgtctcaacagcgattttcttt
tctgataaaaacgttgacagcaatttggttacctggaatcgagttgtattactttatggg
cctccaggcactggaaagacgtccttatgcaaagcactcgcccagaaactctccatcaga
atgtcaggaaggtattcatatggacagtttgtggaaatcaacagccacagtctgttttct
aagtggttttccgagagcggtaaacttgtcacgaagatgttccagaagattcaggaactg
attgatgacaaagaggctcttgttttcgtcctaattgatgaggtggagagtctgacagcg
gcacgaaacgcctctcaggctggaacagaaccttcagatgctatcagagtggtcaactca
gtccttacacagctggaccagatcaaacgatatccgaacgtggtcatcctcacaacctca
aacgtaacagagaagatagatttggcctttgtggacagagcggatataaagcagtatatc
ggccccccgagcgcgagcgccatcttcagcatctacctgtcctgtctggaagagcttatg
aagcggcagatcatttacccgaggcagcagctgctgaacctggaggagttgcgcactatg
ggctacattgagagtgatgtgactgagctcagcctgtacctgcagagaatcgcaaagaag
agtgttggcctgagtggacggactttgaggaaaattccctttttggctcacgcgctttac
gcaaagacgtctgtgctgactgttgagagttttctggacgctatggacaaagctgtggtt
cagcagttaaaggaacgggagaccttggctaactgtttatga
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