Colossoma macropomum (tambaqui): 118798982
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Entry
118798982 CDS
T09004
Symbol
rad54b
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118798982 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118798982 (rad54b)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
118798982 (rad54b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
118798982
NCBI-ProteinID:
XP_036414534
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MRRSAAPSQLQGNAAKRPRFVPPGPSQTGIPGNGLYKHHQSGRAQEHLPSSEVQKCKKTV
EAPAVPKVPGVYKALARVLSAVPQGERKENAPESSSVPMDSEQHPESPSPDRPDQLKTHA
TTTPVAQYYSVMWCKASSRKHKRWEGDAVLVARGRSVILKDMEGRDIGRGSGYKASELES
LCEGQTLMVGGKQIEVMGIISDEDYAKGRCFQDAAGDIPPETVIRAPVSRPVAKPFARPG
LKGGSTSGPEPEGRVPKPRHDPSAPGALVMPRPSANHQWLCNKQSLLVVDVVVDPYLTNH
LRPHQKEGVVFLYECLMGMRFAGRYGAILADEMGLGKTLQCVCVLWTLLRQGPYGGQPVL
KRALVVCPGSLVKNWAAEFNKWLGRERIHVYTVDQDHRVEDFVSSPLCPVMVISYEMLLR
SIEVLKKLDFGVVICDEGHRLKNSSIKTASALTALACERRVILTGTPVQNDLQEFYSIIE
FVNPGILGTSAAYRKIYEEPIIRSRQPTCTEEERVMGEERAAELARLTGVFTLRRTQEII
NRFLPERLEWTVFCRPTELQVRLYDTLLSTRSVRACLSAYNTHAFTHSPHLICINALKKL
CNHPGLLYNTIKENTDELYEGLSVELFPEAYSTGSFCTADSGKLLVLADLLDAIQHVNRT
DKVVLVSNYTQTLDLLQDLCAHLGYTWCRLDGQTPVAQRQRIVESFNSPYSSHFLFLLSS
KAGGVGLNLVGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRFLTTGTIEEKIYQ
RQVSKQGLSGAVVDLGKKAEHINFSAEELRDLFTFDPNTSCLTHDLLDCDCLGDGSTPGV
VEEATLAEGRACQLGRRANSAXASPQRVSMSELMHWRHFSGAIQSYGDVYLDYAHQHITY
AFQSTTSKTQNTV
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcggtctgcagccccaagtcagctgcagggcaatgctgcaaagaggccaaggttc
gtgcctcctgggccctcgcaaactgggatacctggcaatggcctttacaagcaccaccag
tctgggagagcacaggagcacctgccttcatctgaggtccagaaatgtaagaagactgtt
gaagctccagctgtgcccaaagtcccaggggtatataaagctttagcaagggttctgagt
gccgttccccagggagaacgtaaagaaaatgccccggagtcatcgagtgtccccatggac
tcagaacaacacccagagtcaccctcaccagaccgcccagatcagcttaaaacacatgcc
actaccactccagttgcacagtactacagtgtaatgtggtgcaaagcttcgtccaggaaa
cataagcgttgggaaggtgatgctgtactcgtggccaggggacgaagtgtcatcctcaaa
gatatggagggccgagatattggacgagggtcaggctataaggcatctgagttggagagc
ctatgtgaaggccagactctgatggtgggagggaagcagattgaagtcatggggatcata
tcagatgaagactatgccaaggggcgctgttttcaggatgctgctggggacattccccca
gaaacagtcatcagggcacctgtgagccgtccagtggccaaaccttttgccaggccagga
ctgaaaggaggatccaccagtggtcctgaacctgaggggcgtgtccccaagcccagacat
gatcctagtgccccaggagccctagtgatgccccggccctctgccaatcatcagtggctt
tgtaataaacaaagcctcctagtggtggatgtggttgtggacccctacctcaccaatcat
ctgcggccacatcaaaaagagggtgtggtctttctgtacgaatgtctcatgggaatgagg
tttgctggacgctatggagcgattctagcagatgagatgggcttggggaagaccctgcag
tgtgtatgtgtgctgtggacactgctcagacaaggcccatacggtggtcagcctgtgttg
aagagggcacttgtggtgtgccccggaagcctggtgaaaaactgggccgcagagttcaac
aagtggcttggcagagagagaatccatgtttacactgttgaccaggaccaccgtgtggag
gattttgtgtcctctcccctgtgtccagtgatggtgatcagttacgagatgctgcttcgc
tcaatagaggtattaaagaagctggattttggtgtggtcatttgtgatgagggccatcgg
cttaaaaacagcagcatcaagactgccagcgccctcactgctctcgcctgcgaacgtcgg
gtgatcctcacaggcactcctgtccagaatgatctgcaggagttctactccattattgag
tttgtgaatccaggcattttgggaacttcagcagcctacagaaagatttatgaagaacca
atcatcagatctcgacagcccacctgtactgaggaagagagggtaatgggtgaggagcgg
gcagcagaacttgcaaggctgaccggtgtattcactctgcgtcgaacgcaagagatcatc
aaccgcttcttaccggagcggttggagtggactgtcttctgcaggccaacagagctccag
gtgcggctgtatgacacacttctttccacgcgatctgtcagggcctgtctgtccgcgtac
aacacgcacgcattcacacacagtcctcatctcatctgcatcaacgcactcaagaaactc
tgcaaccaccctgggctcctctacaataccattaaggagaacactgatgagttgtatgag
ggcctctcagtggagctcttccctgaggcttactccactggcagcttctgcactgcggac
tctggaaaactgctggtgctcgcagaccttctggatgctatacagcatgtcaaccgcaca
gacaaggttgttttggtgtccaactacacacagactcttgacctattgcaagacctttgc
gctcaccttggctacacctggtgccggcttgatgggcagaccccagttgcacagcgacag
cgaatcgttgaatccttcaatagtccatactcctcccacttccttttcctgctgagctct
aaggctggaggtgtcgggctcaaccttgttggtgcctcccatcttgttctgtatgatata
gactggaatccagctaatgacatccaggctatggccagagtgtggagagatggacagaag
aaaacagttcacatttacagatttcttactacaggtaccatagaagaaaaaatctaccag
agacaggtgagtaagcagggtctttctggggcagtggtggacctgggcaaaaaggcagag
cacatcaacttctctgccgaggagctccgtgatctcttcacttttgaccctaataccagc
tgcctcactcatgacctgctggactgcgactgcttgggggatggaagcacaccaggtgtg
gttgaagaggcaaccttggctgaagggagggcgtgtcagttgggtcgtcgtgccaacagt
gccnnagcgtctcctcaaagggtcagcatgtctgagctcatgcattggagacatttttct
ggagccattcagtcatatggtgatgtttacttggactacgcccaccaacatatcacatat
gcctttcagagcaccacttctaaaactcaaaacacagtttaa
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