Colossoma macropomum (tambaqui): 118799037
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Entry
118799037 CDS
T09004
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03013
Nucleocytoplasmic transport
cmao03015
mRNA surveillance pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118799037 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
118799037 (rbm8a)
03015 mRNA surveillance pathway
118799037 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118799037 (rbm8a)
03041 Spliceosome [BR:
cmao03041
]
118799037 (rbm8a)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118799037 (rbm8a)
Spliceosome [BR:
cmao03041
]
Complex C
Other components
EJC/TREX
118799037 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
118799037
NCBI-ProteinID:
XP_036414617
LinkDB
All DBs
Position
Unknown
AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKSKRRGGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggatcttcacgaagcaggaggcgaagactttcctatggacgaggat
ggagatgagagtattcacaagctaaaagaaaaagccaagaagaggaagggtcgcggtttt
ggatctgaggaaggagcgaggtccagagtgcgagaagactacgatacagtggagcaggat
ggtgatgagcctggcccacaaagatctgttgaaggatggatcctctttgtgactggcgtt
catgaggaagcaacagaagaagacatccatgacaaattttcagaatttggtgagatcaag
aatctccatctcaacttggacagaagaacgggttacctcaagggttatgcgctggtggag
tatgaaacatacaaagaggcacaggctgccatggaggggctgaatggccaagatcttatg
ggtcaaccgatcagtgttgattggtgctttgtcagagggccaccgaagagcaagaggagg
ggtggaaggagacgtagcagaagtccagacagaagacggcgctga
DBGET
integrated database retrieval system
