Colossoma macropomum (tambaqui): 118799383
Help
Entry
118799383 CDS
T09004
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118799383 (rbm39a)
Spliceosome [BR:
cmao03041
]
Common components
Common spliceosomal components
General mRNP proteins
118799383 (rbm39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RSRP
RRM_7
Motif
Other DBs
NCBI-GeneID:
118799383
NCBI-ProteinID:
XP_036415105
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MADDFDIEAMLEAPFKKDETKSISSNGHEDRSKKKKKSRSRSRSRERKRSKSRSRSRERK
RSKSRERKRTRSRDRSRERKRSRSRDKRRSRSKERRRSRSRSRERGGRFRVSFSGLKFNG
GSRGKTGPPPAIKLSRKRSRSRSPFRRDKSPIRQPIDNLTPEERDARTVFCMQLAARIRP
RDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEATSVPLAIGLSGQRLLGVPIIVQ
ASQAEKNRAAATANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDTE
TGRSKGYGFITFADAECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELER
TGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNISMP
TNQALNLPSQPIATHCFQLSNMFDPHSENDPGWDIEIQDDVIEECNKHGGVIHIYVDKKS
TEGNVYVKCPTIPAAMAAVSALHGRWFGGKMIKAAYVPLPTYHNLFPESVQATQLLMPTR
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgactttgacatcgaagcaatgcttgaggcgccatttaaaaaggatgagacc
aagtccataagttccaatggccatgaagaccggagcaagaagaaaaagaagagcaggagt
cgtagcaggagtagggagcgaaagagaagcaagagtcgtagcaggagtagggagcgaaag
agaagcaagagtcgggaacgtaaaaggacccgaagccgggacaggagtcgggagcgtaag
aggagccggagccgcgacaagagacgcagtcggagcaaggaaagacgccgcagccgttca
aggagcagagagcgtggaggccgcttcagagtgtccttttctggcctgaaatttaacggt
ggttccagggggaagactggcccaccacctgccatcaaactaagccgtaaaaggtcaaga
agccgcagccctttcagaagagacaaaagccctatcagacaacccatagataaccttaca
ccagaggagagggatgcacgcacagttttctgcatgcagcttgctgccagaatccggcca
cgggacctggaagagttcttctctgctgtgggaaaagtaagggatgtgaggatgatctct
gacaggaactccaggagatccaaaggcattgcttacattgaatttgtggaagccacctct
gtgcctctggcaattggcctgtctggacaaaggctgctaggtgtaccaatcattgttcag
gcctcacaggctgaaaagaacagagcagctgcaacggcaaacaacctgcagaaaggcagt
gctgggcctatgaggctttatgttggctcacttcacttcaatatcacggaggacatgctc
agaggaatctttgaaccatttggacggattgatagtattcagcttatgatggatactgaa
acagggcgatccaaaggatatggctttatcacatttgctgatgctgaatgtgctaagaaa
gccttggagcagctaaatggctttgagctggctggcaggccaatgaaagtgggtcatgtg
actgagcgcaccgatgcctccacagcaagctccttcctggataatgatgaattggagagg
actggcattgacctgggcactacaggaaggctgcagctcatggccaggctggctgaaggt
actggtctgcagatccctccagctgcgcagcaggctcttcagatgagtggctccatggtt
gcaatggcagcagctacagcggctatgaatcctggattaagtttcaatatcagcatgccc
acaaaccaagctttaaatctaccctctcagcctattgccacacactgcttccagctttct
aacatgtttgatccacactcggagaatgatcctggatgggatattgaaattcaagatgat
gtcattgaagaatgtaacaaacatggcggcgttattcatatatatgtggacaagaaatct
actgaggggaatgtatatgtgaagtgtccaaccatccctgctgcaatggctgcagtaagt
gcattacatggacgttggtttggaggtaaaatgatcaaagcagcatatgtccccctgcca
acataccacaatctgtttcctgagtcagtgcaagcaacgcagcttcttatgcctactcgc
cggtga
DBGET
integrated database retrieval system
