Colossoma macropomum (tambaqui): 118799439
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Entry
118799439 CDS
T09004
Symbol
hnrnpa1a
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1a
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118799439 (hnrnpa1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118799439 (hnrnpa1a)
03041 Spliceosome [BR:
cmao03041
]
118799439 (hnrnpa1a)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118799439 (hnrnpa1a)
mRNA cycle factors
Common to processing body (P body) and stress granule
118799439 (hnrnpa1a)
Spliceosome [BR:
cmao03041
]
Common components
Common spliceosomal components
hnRNP proteins
118799439 (hnrnpa1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
118799439
NCBI-ProteinID:
XP_036415199
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MSKETPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDSNTKRSRGFGFVT
YSSVSEVDAAMNARPHKVDGRAVEPKRAVSREDSSRPGAHSTVKKIFVGGIKEDTDEEHL
RDYFSQFGKIEEVNIMTEKNSDKRRGFAFITFDDHDSVDRIVIQKYHTVNGHNCEVRKAL
SREEMNRISMSPRGGRGGGGNFGGRGGGYGGGYGGGRGGYGGGDGYGNGYGGGNGGYGGG
GPGYGGNRGYGGGGGGGGYGNQGGGGGYGGGGYDNYNGGGGGNFGGGNFGGGGGGGGGGG
NYNDFGNYNNQSSSNYGPMKGGNYGGGGRSGGGPYGGGYGGGSGGGYGGGSGGRRF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaagagactcctcgtgagccggagcagctccgcaagctgttcattgggggcctc
agttttgagaccactgatgaaagccttcgggcccattttgaacaatggggaaccctcaca
gactgtgtggtaatgagggactcgaacaccaaaaggtcaagaggatttggctttgttacg
tacagctcggtttccgaagtcgatgctgctatgaacgctcgtccgcacaaagtggatggc
agagctgttgaacctaagagagccgtgtcacgagaggactcctccagaccaggtgctcac
tcaactgttaagaagatattcgtgggtggaatcaaggaagacactgatgaagagcacttg
cgtgactacttcagtcagtttggcaaaattgaagaggtgaacatcatgaccgagaagaac
agtgataagaggaggggatttgccttcatcacatttgacgaccacgattccgtggacagg
atagttatccagaagtaccacacggtgaacggtcacaactgtgaagtcaggaaagcgctt
tccagggaagagatgaacagaatttcgatgagcccaagaggcggccgtggaggtggtgga
aactttggcggcagaggtgggggatatggaggtggatatggaggaggccgtggaggatac
ggcggtggtgatggatatggcaatggctatggaggaggaaatggtggttatggtggaggt
ggtcctggttatggtggtaaccgtggttatggaggtggtggcggcggtggtggctatggc
aaccaaggcggcggtggtggctatggtgggggaggatatgacaactataacggtggcgga
ggaggaaacttcggtggaggtaactttggtggtggcggcggcggcggcggcggtgggggc
aactataacgactttggcaactacaacaaccagtcgtcctctaactatggcccaatgaaa
ggaggcaactatggcggaggtggcaggagtggcggtggcccctatggtggcggttatggc
ggcggttccggtggtggctacgggggtggttctggtgggaggaggttctag
DBGET
integrated database retrieval system
