Colossoma macropomum (tambaqui): 118799474
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Entry
118799474 CDS
T09004
Symbol
srsf6b
Name
(RefSeq) serine and arginine rich splicing factor 6b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118799474 (srsf6b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118799474 (srsf6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118799474 (srsf6b)
Spliceosome [BR:
cmao03041
]
Common components
Common spliceosomal components
SR proteins
118799474 (srsf6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
118799474
NCBI-ProteinID:
XP_036415261
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVLVEHARGPRRDRDGYGGGYGGGGRSSSGYSSRSRSGRDKYGPPVRTEYRLIVENL
SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRTHSDMKRAIDKLDGSDINGRRIR
LVEDKPKRRRSYSGSRSRSRSRRRSRSRSRRSRSSRSRSRSRSRSRSRSKNRSRSKSGHK
YSSRSSRKSHSKSPAKSRSKKSRSRSRSRKSRSHSASRKSRSRSDARKSRSKSRSKSRSK
SRSKSRSKSRSKPKSERGSRSRSKEKSVSKKSRSRSASPMENGNNERPKSASRSPSPQED
RDRSKSPAKRSVSRSPSRSKSRSRSRSASQD
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagtttatataggcaggctgagctaccacgtccgcgaaaaggacatccagagg
ttcttcagcggctacgggaaactgctggagatcgacttgaagaacgggtatggctttgtg
gagttcgaggacacccgagatgccgacgatgcagtgtacgagctgaacggcaaagagctt
tgtggcgaacgtgtcttggtcgaacatgcgagaggaccgcgtcgggaccgggatggatac
ggtgggggttatgggggtggcgggcgcagtagtagtggctacagcagcagaagccgctct
ggccgagacaagtacggaccacctgtacgcacagagtatcggctgattgtggagaatttg
tccagtcgctgcagctggcaggacctcaaggacttcatgcggcaggccggtgaagtgacc
tacgctgatgcccacaaggagcggaccaatgagggagtgatcgagtttcgcacccactct
gatatgaagagagcgatagacaagttggacgggtctgatatcaatggaaggagaatccgt
ctggtggaggataagcccaaacgtcgccgctcttactcgggtagcaggtccaggtcccgt
agcaggcgccgttctcgcagcagaagccggaggagcaggagctcacgaagccgctcaagg
tctcgctctcggtcacgttcccgcagcaagaaccgctctcgctcaaagtccggtcacaag
tatagttcccggtccagcagaaagtcccattccaagtctccagccaaatcccgctccaaa
aaatcccgttctcgctcccgctcccgaaaatctcgcagtcactctgcgagccgcaagtcc
cgctcacgatccgatgcccgcaagtcccgctctaagagtcgctctaagagtcgctctaag
agtcgctctaagagtcgctccaagagtcgctcgaagcccaaatctgagcgaggttctcgg
agccgttccaaggaaaagtcggtgagcaagaagtcccgcagccgctccgcctctccgatg
gagaacggaaacaacgagcggccgaagtcagcctcacgctctccttctcctcaggaggat
cgtgaccgctctaaatcacccgccaaacgttcagtgtcccgttccccttctcgatcgaag
tcccgttcacgttccaggtctgcttcacaggactga
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