Colossoma macropomum (tambaqui): 118799478
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Entry
118799478 CDS
T09004
Symbol
sap18
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03013
Nucleocytoplasmic transport
cmao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118799478 (sap18)
03015 mRNA surveillance pathway
118799478 (sap18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118799478 (sap18)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118799478 (sap18)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118799478 (sap18)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
118799478 (sap18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
118799478
NCBI-ProteinID:
XP_036415314
LinkDB
All DBs
Position
Unknown
AA seq
184 aa
AA seq
DB search
MRLLDKISLGRRKQRLVEIKSVFSLEEKGIAMAVESRVTQEEIKKEPEKPVDREKTCPLL
LRVFTTNNGRHHRMDEFARGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFGF
AIVYPDPKRQGYRVKDIGNTISGRKGADDSMTLQSQRFQIGDYLDIAITPPNRAPPLQGR
MRPY
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctggacaagatttctttaggtcggcgaaagcagcgtcttgtggagattaag
tccgtattttcactcgaagaaaaagggattgcgatggccgtcgaatcgagagttactcag
gaggaaatcaagaaagagccagagaagccagttgatagagaaaagacatgtccgctgctg
cttagagttttcaccacaaataatggcaggcatcaccgaatggatgagtttgcccgggga
aatgtaccgtcgagcgagcttcagatttacacttggatggacgccaccctgaaagagctg
accagcctggtgaaggaggtttatcctgaggctcgaaaaaaaggcacgcatttcggcttt
gccattgtgtacccagaccccaagcggcaaggctacagagtaaaagacattgggaacaca
atatcaggccgtaagggtgcagatgactccatgaccctgcagtctcagcgctttcagata
ggagactacctggacatcgccatcactcctccaaaccgtgctccgcctttgcaaggccgc
atgagaccctactga
DBGET
integrated database retrieval system
