Colossoma macropomum (tambaqui): 118799485
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Entry
118799485 CDS
T09004
Symbol
hnf1ba
Name
(RefSeq) LOW QUALITY PROTEIN: hepatocyte nuclear factor 1-beta-A
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118799485 (hnf1ba)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
118799485 (hnf1ba)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
118799485
NCBI-ProteinID:
XP_036415287
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All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MLAEMVSKLTSLQQELLSALLDSGVTREVLVQALDDMEPRPAALGVKLEGVHTSPGXSGE
TDSHKPVFHTLSNGHGRGKLSGDEGSEDGDEYDTPPILKELQALNTEEAVEQRAEVERML
AEDPWRAARMIKGYMQQHNIPQREVVDLTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVR
KQREILRQFNQAPQGSGINMTDKGSQDQVLLFFPEFSQPGQSMGQHGDDTNTEPALKKLR
RNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQRGVSPSKAQGLGTNLVT
EVRVYNWFANRRKEEAFRQKLAMDAYTGQAHSMNSLLSHSSPHHPQASTSPPSKMQAIRY
NQGPGEVSSSTTINHHGSNGMTSGQSVLQQVSPGALDPGHGLLSPDAKMISVSGGGLPPV
STLTNIHSSHHPHQQTQNLIMPISGVMAIAQSLNTSQAQTVPVINSVAGSLATLQPVQFS
QQLHSSHQQGLMQQSHSHMSQQPFMATVTHSHMYSHKQEPPQYSHPSRFPSAMVVTDTNS
LSTLSSMSSTKQCPLQAW
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgttagcggagatggtgtctaagctgacgtctctgcagcaggagctcctgagcgccctg
ttagactctggagtcaccagagaagttctggttcaggcgctggacgacatggagccccgg
ccggccgcgctgggggtgaagctcgagggcgtccacacgtcccccggtnncagcggcgag
acggactcgcacaagcccgtgtttcacactctctccaacgggcacggcagggggaaactg
tccggcgacgagggctcggaggacggggacgagtacgacacgccacccatcctgaaggag
ctccaggcgctcaacactgaagaggcggtcgagcagagggccgaggtggagcggatgctg
gctgaggacccatggcgcgcggcccgcatgatcaaaggctacatgcagcagcacaacatc
cctcagcgcgaggtggtggacctgaccggcctgaaccagtctcacctctctcagcacctg
aacaagggcacgcccatgaagacgcagaagcgcgcggcgctctacacgtggtacgtcagg
aagcagcgcgagatcctgcggcaattcaaccaagcaccacaagggtctggcattaatatg
acagacaaaggcagtcaggatcaggtactcctttttttcccagagttcagtcagcctgga
cagagtatggggcagcatggggatgacaccaatactgagcctgccctcaagaagctccga
cgcaaccgcttcaaatggggacctgcatcccagcagatactctaccaggcatacgatcgg
caaaagaacccgagcaaagaggaacgggaggctctggtggaagagtgcaatcgggcggag
tgtctccagagaggtgtatctccatccaaagcccaagggctcggcaccaacctggtcaca
gaggtacgcgtctacaactggttcgccaaccggcgcaaggaggaggccttcaggcagaag
ctggcgatggacgcgtacaccggtcaagcgcacagcatgaactccctcctctcacacagc
tcgccacaccatcctcaggccagcacttcaccgcctagcaagatgcaagccatcaggtac
aaccagggtccaggtgaagtcagctcttccactaccatcaatcatcacggcagcaatggc
atgacgagtggccagtctgtgttgcagcaagtctctcctggagcgctggaccccggccac
ggcctgctgtcacctgacgccaagatgatctcagtatcaggtggaggtcttccaccggta
agcaccctgaccaacatccacagctcccatcaccctcaccagcaaacacagaacctcatc
atgcctatctctggagtcatggctattgcccagagtctgaacacgtcacaggcacagaca
gtgccagttatcaacagtgtggcaggcagtctggccactctacagcctgtccagttctcc
cagcagctgcacagctcccaccagcagggcctcatgcagcagtcccacagccacatgagc
cagcagccctttatggccactgtcacacactcacacatgtactcacacaagcaggaaccg
ccacagtattcccacccctcacgctttccctccgccatggtggtgacggacaccaacagc
ctcagcaccctcagctccatgtcctccaccaaacagtgtcctctgcaagcctggtga
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