Colossoma macropomum (tambaqui): 118799566
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Entry
118799566 CDS
T09004
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118799566 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118799566 (taf4a)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118799566 (taf4a)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118799566 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
118799566 (taf4a)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118799566 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
AAA_23
Motif
Other DBs
NCBI-GeneID:
118799566
NCBI-ProteinID:
XP_036415410
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MVTTLPSHEVKTGTSTAQTFSGGDAMDARAESGAALPGTPVSNSSPAADASAGMVLNNGP
GVVVAKGPANGSGGAPSTSGTVIIQTSTATGATVTVVRPAMQTTANAMAHAVNGSNVNST
AVLNVAQQAPAAAAPATGVTLTLTPQTSGQAPAPGVVTTKPEPAKSIIQSAAGHTTTVTL
TQQLQPQLHVSPGPAKGAVLQQGVARSAAPAPSPAGVRAIAPQQVLAPRLPQSSPGQPSI
QNIQLPPGMVLVRSETGQLLMIPQQVLAQMQAQMQATRAATPASTTPGQITSAQTPGAPI
MTRQVAPTIIKQGSPTASSTATTTLQRPPVQLPSVGSVLAVQPGAASRVVTPATGTSVTL
ATETMENVKKCKNFLSTLIKLATSAKQSSQTAANVKELVKNLLEGMIEAEDFTSRLYKEL
NSSPQPYLVPFLKRSLPALRQLTPDSLAFIQQSQGLQAKPAATVALTSSTAANTAPAATA
PPAATVAAAVTSATPGTATTAATTATANTVATAASAAVAAPRTLIQPALSKANQPASLVL
QSPQQGAIVKTPQVTLTTTPMVTLRGQPHSRIVVGQPHMQVKQLQTVTVKPGAVPGAKLS
PSPVTLIAAQKSKLKDAAGGTFRDDDDINDVASMAGVNLSEESARILATNSDVVGAVTRS
CQDEAFLSSALLQRRILDIGKRFGVTDLAPDVVNLVSHATKQRLQNLMEKVSVIAQQKNM
TYKEDGRFEQVTDVRAQLKFFEQLDQLEKQKKEEQEREILMKAAKSRSRQEDPEQLRLKQ
KAKEMQQQELAQIRQRDANLTALAAIGPRKKRKLDSPALGTDAEGSGSSASTTAGLSSGV
SRQFTRQRITRVNLRDLLFCLENERASSRSQLLYRALLK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggtaactacattgcccagccacgaagtgaagaccgggacgtcgacggcgcaaactttt
agcggaggcgatgccatggatgcgcgggcagaaagcggcgccgctctcccgggcacgccc
gtgtcgaacagcagcccagcagcggacgcttcggcgggcatggtgctgaacaacgggcct
ggagtagtagtagcgaaaggaccggcgaacggtagcggcggcgcgccttccacgtccggc
acggttatcatccagacgagcacagccactggagccaccgtgaccgtcgtgaggccggct
atgcaaacaacggctaacgctatggctcacgccgtgaacgggagtaacgttaacagcacc
gcggttctgaatgtagctcagcaggcacccgcagcagcagcgccagccacgggagtcacg
ttgacgttaactccgcagacttcgggccaggctcccgctccaggggtggtgacaaccaag
cccgagccggccaagagcatcatccagagcgcagcggggcacaccacaaccgtcactctc
acgcagcagctgcagccacagctgcacgtgtctcccgggccggccaagggggcggtgctg
cagcagggcgtcgcacggagcgccgctccagcccccagccccgcgggggtcagggccata
gcaccgcaacaggtgctggcgccacggctcccacagagtagcccgggacagcccagcatc
cagaacatccagctacctccaggtatggtgcttgtgcgtagcgagactggtcagttgctg
atgatccctcagcaagtgttggcccagatgcaggctcagatgcaggccacgcgtgctgcc
actcctgccagcacaacgcccggacagatcacttctgcacagacccctggtgctccgatc
atgaccaggcaggtggctcctaccatcatcaagcagggctcacccacagctagcagcact
gctaccaccacactccagagacctcctgtgcagctgccctctgtgggctctgtgctggca
gtacagccgggggccgcctcgagggtggtgactcctgctacagggaccagcgtcactttg
gcaacggagacgatggagaatgtgaagaagtgtaagaacttcctgtccacgctgatcaag
ctggccaccagtgcgaagcagtcgtcacaaacagctgccaatgtcaaagaactggtcaag
aacttgctggagggaatgatcgaggcggaggacttcaccagcaggttatacaaggagctc
aactcctcaccccagccttatctcgtgcctttcctgaagaggagtcttcctgctctgagg
caactcactccggactcccttgccttcatccagcagagccaaggcctccaggccaaacct
gcagctactgtagcgctgaccagctctacagcagctaacacggctcctgcggccaccgca
cctccagcggccactgtggccgctgcagtgacctcagccaccccaggcactgcaaccact
gcagccaccacagcaactgcaaataccgtggctactgctgcgtctgctgctgtcgcggcc
ccacggacgcttatccaacccgctctcagcaaagccaaccagcctgcctcattggttttg
cagtctccgcagcaaggggcgatagtaaagaccccccaggttaccttgacgactactccc
atggtaacactcaggggtcagcctcatagccgcattgtagttggacagcctcacatgcaa
gtcaaacagctacaaacagtgacagtaaagccaggcgcagtgcctggggctaaactttct
cccagcccagtgactcttatcgcagctcagaagagcaagctaaaggatgctgctggtggg
acattcagggacgatgatgacatcaacgatgtggcctccatggctggggtgaacctgtca
gaggagagtgctcgtatcctggccaccaactcagacgtggtgggggctgtgactcgctcc
tgccaggatgaggccttcctttcctctgccttgttgcagcgtagaatactggacataggt
aaacgctttggggtgacagatctggcaccagacgtggtgaacctggtctcccatgccact
aagcagagactacagaaccttatggagaaagtctctgtcatagctcagcaaaagaacatg
acctataaggaggatgggcggttcgagcaggtgactgacgtacgtgcacagttgaaattc
tttgagcagcttgatcagctggagaagcagaagaaagaagagcaggaaagggaaatactt
atgaaggcagccaagtctcggtctcggcaggaagacccggagcagttgcggttgaaacag
aaggccaaagagatgcagcaacaggagctagctcagataagacagagagatgccaacctg
acggcgctggctgccattggacccagaaagaaaaggaaactcgattctcctgctcttggc
actgatgcagagggttctgggtcgtcggcgagcacgactgcggggttgagtagcggagtg
tcgagacagttcacccgtcagcgcatcacacgtgtaaacctcagggatctgctcttctgc
ctggagaacgagagagcaagcagtcgctcacagcttctctacagagcgctgctcaaatag
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integrated database retrieval system
