Colossoma macropomum (tambaqui): 118799777
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Entry
118799777 CDS
T09004
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04142
Lysosome
cmao04144
Endocytosis
cmao05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118799777 (cltcb)
04142 Lysosome
118799777 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118799777 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118799777 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmao04147
]
118799777 (cltcb)
Membrane trafficking [BR:
cmao04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
118799777 (cltcb)
Exosome [BR:
cmao04147
]
Exosomal proteins
Proteins found in most exosomes
118799777 (cltcb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
118799777
NCBI-ProteinID:
XP_036415711
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMSDPNN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTI
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRSQAGGKLHIIEVGTPPSG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKHDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNTLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASV
LLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGHAAAQSGNWEDLVKFLLMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPTDAWKESQFKDIVTKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
SKVKQLSLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYQALRTSIDAYDNFDNISLAQSL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQ
EEKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLTKVDAIKEKVDK
LDASESLRKEEEQATEAQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYAAPTGYGQPVQPG
FSYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctacctatccgcttccaggagcacctgcagctccagaacctgggcatt
aacccagcgaacattgggttcagcaccctcaccatggagtctgacaagttcatctgcgtg
cgagagaaagtcggcgagcaggctcaggtggtgatcattgacatgagtgatcccaacaac
cccattcgcaggcccatctcggcagatagtgccatcatgaatccggcgagcaaagtcata
gccctaaaagacgctgcgaaaacccttcagattttcaacattgaaatgaaaagcaagatg
aaggcacacaccatgacggacgatgtcacattctggaagtggatctccctcaatactata
gcacttgtaacagacaacgcagtctaccactggagtatggaaggagactcccagcccatt
aaagtgtttgaccgacactccagtttagccggctgccaaattatcaactaccgcactgat
gccaaacagaaatggcttcttctcattgggatttcagcacagcaaaatcgtgtagtggga
gcaatgcagctgtactctgtggacaggaaggtgtcccagcctatcgagggccatgctgca
ggctttgcacagtttaaaatggagggaaatgctgaagaatccacgctcttctgctttgct
gttcggagtcaagctggaggaaagttgcacattattgaggttgggacacctccgtctggg
aatcagccttttccaaagaaagcagtagatgtgtttttcccgccagaggcccagaatgac
ttccctgttgctatgcagatcagttccaaacacgatgtggtctttctcatcacaaaatat
ggctacatccacctgtatgaccttgaaactggcacctgcatctacatgaacaggatcagt
ggggagaccatctttgtgactgctcctcatgaggctactgctggcattattggggtcaac
aggaagggacaggtgctgtctgtgtgtgtggaggaggaaaacatcattccctatatcacc
aatgtgctgcagaaccctgacctggccctgcgcatggctgtccgcaacaatctagctggt
gcagaagagctctttgcacgcaaattcaacactctgtttgcagggggcaactactctgag
gcggcgaaagtggccgccaatgcaccaaagggtatcctgcgaaccccagataccatccgc
cggttccagagtgtcccagcacagcctggccagacctcccctctgctgcagtactttggt
atccttctggaccagggccagctgaacaagtttgaatccctagagctgtgcaggcccgtc
ctacagcagggccgcaagcagctgttggagaagtggctgaaggaagataagctggagtgc
tcagaagaattgggtgatttggtgaagtcggtggacccgacccttgctctcagtgtctac
ttaagggctaatgttcccaacaaagttatccagtgctttgcagagactggccagttccag
aaaattgtactgtatgcaaaaaaggttggctacactccagactggatcttcctgcttagg
aatgtcatgcgaatcagtccagagcagggcctgcagttctcccagatgcttgtgcaggat
gaggaaccactagcagacatcacccagattgtggatgtgttcatggagtataacttgatc
cagcaatgcacctccttcctgttggatgctctgaagaacaaccgccccactgagggccca
ctgcagacccggcttctggagatgaacctgatgcatgctcctcaggttgctgatgccatt
ctgggaaaccagatgttcacccactatgaccgagctcatgtggcacagctgtgtgagaag
gctgggttgttgcagagagccctggagcactacactgacctgtatgacatcaagcgagct
gtggtccatacccacctgcttaacccagagtggttggtgaacttctttggctcactgtca
gtggaggactctctcgaatgcctgagagccatgctgtcagccaacatccgccagaacctg
cagatctgtgtccaggtggcctccaagtaccatgaacagctctccacccagtctctcact
gagctctttgagtccttcaaaagctttgaaggtctgttttacttccttggctccattgtg
aacttcagccaagacccagaggtccatttcaagtacattcaggcagcatgtaaaactggc
cagatcaaagaggttgagagaatctgcagagagagtaactgctatgatcctgaacgtgtg
aagaatttccttaaggaagccaaactgactgatcagctgcctctcattatcgtatgtgac
cgcttcgactttgtccacgacctggtcctttatctgtaccgcaacaacctgcagaagtat
attgagatctacgtgcagaaggtgaatcctagccgcttacctgtggtgattggcggcctg
cttgatgttgactgctcagaggatgtcattaagaatctgatcctggtagtgcgaggccag
ttctccactgatgagctcgtagccgaggtggagaagagaaacagactgaaactgctgctg
ccttggttagaggcccgcatccatgagggctgtgaggagcctgccactcataacgccttg
gctaagatctacattgacagcaacaacaaccccgagcgcttcctccgagaaaatccctat
tatgacagccgtgttgtgggcaaatactgcgaaaagagagaccctcatctggcttgcgtg
gcatatgagagaggacagtgtgaccaagaactcataaatgtttgcaatgaaaactccctc
tttaagagtttgtctcggtatttggtgcgtcggaaggaccctgagctgtgggctagtgtt
cttttggagagcaacccatacagaagacccttgatcgaccaggtggtgcagactgcactg
tctgagacgcaagatccagaagaagtgtctgttacagtcaaagccttcatgactgctgat
ctacccaatgagctcattgagcttcttgagaagattgtcttagacaactctgttttcagt
gaacacaggaacctgcagaaccttctgatcctgacagccatcaaagctgaccgtactcgt
gtcatggagtacatcaaccgcctggacaactacgatgcccctgacatcgccaacattgcc
atcagcaacgagctctttgaggaggcttttgccatctttaggaagtttgatgtgaacaca
tctgctgtacaggttctgattgagcatattggaaatcttgaccgggcctacgagtttgct
gagcgctgcaatgagcctgcagtgtggagtcagctggctaaggctcagctgcagaaaggt
ctggtaaaagaagctattgactcctatattaaggcagatgacccatcggcctacatggag
gtgggacatgctgctgcccaaagtggaaactgggaggatttggtgaagttcttgttgatg
gcccgtaagaaggcacgggagtcttatgtagagactgagctgatcttcgctttggccaaa
accaaccgcctggctgaactggaggagtttatcaatggaccaaacaatgctcacatccag
caagttggtgaccgttgctatgatgagaagatgtatgaggcagctaagctactgtacaac
aatgtatccaactttggccgtctggcttccactttggtccacttgggggagtaccaggct
gctgtggacggggctcgcaaagcaaacagcacacgaacttggaaagaggtctgctttgcc
tgtgtggatgggaaggaattccgtctggcacagatgtgtggcttacatattgtggtccat
gctgatgaacttgaggagctcatcaactactaccaggaccgtggttactttgaggagctg
atcacgatgctagaggctgctctggggttggaacgtgctcacatgggcatgttcactgag
ctggccatcctctactcaaagttcaagccccagaagatgagggagcaccttgagctcttc
tggtccagagtcaacattcccaaggttttgagggcagcagaacaggctcatctgtgggct
gagctggtcttcctatatgacaagtatgaggaatacgataatgccatcatcactatgatg
aaccaccccacagatgcctggaaggagagccagttcaaagacattgtaaccaaggtggct
aatgtggaactctattacaaagctatccagttctatctggagttcaagcctttgttactg
aatgacctgctcatcgtgctttccccgaggcttgatcacacccgcgctgtcaactttttc
tccaaggtcaagcagttgtccttggttaaaccatacctgcgatctgtacagaaccacaac
aacaaatcagtaaatgaagcactaaacaatctcttcataatagaggaggattaccaggct
ctgcgcacatccattgatgcctatgacaacttcgataacatatctctggcccagagtcta
gagaagcatgagcttatcgaattcaggagaattgctgcctaccttttcaaaggcaacaac
cgctggaagcagagtgtggagctctgcaaaaaggacaaactctacaaggatgccatgcag
tatgcgtcagagtcgaaggacacagagcttgctgaagagctgctgcagtggttcctgcag
gaggagaagaaggagtgctttgccgcctgcctcttcacgtgctatgacctgcttcggcca
gatgtggtgctggagactgcctggaggcacaacatcatggacttctccatgccctatttc
atccaggtcatgagggagtacctcaccaaggttgatgcaattaaggaaaaggttgacaag
ctggatgcgtccgagtccttgaggaaagaggaggagcaggccacagaggcacaacccatt
gtttacggcacaccccagctaatgctcactgcaggccccaatgttgcagttcctccccag
cagccttacggctatggctacgctgcccccactggctatggtcagccagtacagccaggc
ttcagctacggcatgtaa
DBGET
integrated database retrieval system
