Colossoma macropomum (tambaqui): 118799843
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Entry
118799843 CDS
T09004
Name
(RefSeq) LOW QUALITY PROTEIN: rootletin-like
KO
K16469
rootletin
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cmao03037
]
118799843
Cilium and associated proteins [BR:
cmao03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118799843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
Crescentin
CENP-F_leu_zip
TPR_MLP1_2
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
118799843
NCBI-ProteinID:
XP_036415811
LinkDB
All DBs
Position
Unknown
AA seq
2022 aa
AA seq
DB search
MSAPESARAEGKLEAVIQKLEESVLSEEKRLTVRGPSPDAPPTCIPARVREIVTKNLSDS
GGSMSSVLSLQEENRVLQSELGRLEDLLAHSRADRDELAIKYSAISERLEQALRLETGVG
DGDCAESRSLAQQNVDLRRRLEEEQAAYKRKLTAYQEGQQRQAQLVQKLQAKVLQYKKKC
SDLEQTLLEKSSEMDQNRLSNELSSNGQRRGEDEPSSELETALIRLEEEQQRSSSLSAVN
AMLREQLEQAGLANEALSQDIRRLTADWTKAREELEQREADWRREEESFHNYFSSEHSRL
LALWRQVVGFRRSVCELKSATERDLSHMRNELAQVSQSVQLQCVGVCVAVRSREDGSALV
LEREAAQRSALEQQLRDRVTEMMNLQAKSDSERAELNSRLVEAVREVERLKAREEEREHE
VASLTRKLEEQSGDEEAELHSLRVHTETLLDTLRDIAQAMLSDSDSGVLSSSAEGDSESS
ALSLLPFLRPSSPHRPPSPRKPSVLLLPESSLSALRSMVASRQLQLQEVRGRLQAAQSSL
QQLRKQVAEAESGRREAELRVQAMQGERDDAQREKETAVRERERIRQERERLTSEKDGLE
KVAQAAQMKEQLLQLECERLQQAAASAQRERDHEREEREAAVQERERAKAEAQRAQTQWG
QSEARGSSLRSELAAVKEALQQGEIERQLLETEKNQLTDALSRVESSNAELXAVIAKLHS
EEAALRDSLAKMGSMNESLAQDKSDLNSIIIQLEEEKSLLLSQRREAEQEKLTIRDELVR
LEQDRLELDSARLALHQSLQESELLRAGLEAELQALRADRQKLQDKVTQLCGEVSSLGAE
LGMARGEGERQGVALEEAGRSRAELARERAGLVVQLTASERENAALTEELAAFRSEREVL
EASLFEVQQQLVQLESRREQLEAENTNLRLRNDNTAAELKRLRADRDGAVAQAERERVAL
KQALADAQQEAQTALRNTLNDHQEELERLASEKETLRCTLETEQEGALRRLREELEEQLK
RMEREREELQEEVRTLQHQRDQRLLQAESEKQQALSLKETEKAVLSERVCSLQAELSTAA
LEVEKLTREAQNLKDQERVAVAALNAELQDLREQLEETVSSHSRELRRLQESCTDQQTRA
DTALRELDECRALLLACEESRDGARRDVLELEKRLCQTRDTGEGHRRDTVELRRSLSDIT
KERDALSQSNGQLREALRAAESERISVKRQCEEKEQRLAVQEETLASAQKEVGELRSCLR
EVERSRLEARRELQELRRQVKVVDGEREQKGREVAELQARLSLEDHREEERGKELFSLKQ
RLAEAEAARNSLKKELSSLQRRLCDSECVWRGCERDLAAQLQEARGCEKKLQDEARNLSL
RAQAAADASTQVQLRLSEAEGRLAATEAELTRSEAGRRDLEFRLISLQSTLTRTLGISAG
GRGSRGRSPASSSHSSVASGVVPRRSSVSPLRSSLSPPKDAVDKASPDNTITSRPLSPER
GDTPLPLVLPELDSETVRSGLRDFLQELREAQRERDEARSQLGALQRELEEVTGERDSAQ
NRLTHLHNTLQECQEGKRGVDSRLTSTQALLQQQEECVRRGERERRALTDRVNELERTLQ
NAEAERKHLQEQCSKLRAGEVRLEAERRRLREALEGAESRATRVELGRRSLEGEIQRLRV
CLTERETEAQTTQERHDSILKQVVEAEARVASLQREVDRLTALLSKAQDAEGVQREKAQS
VSNSLQEATVAHSTTQGRLATLQKHLTTAEQDRRQLQERVDELRAALSEGKHTMASLTER
VQTLQSELTHSQLRREELETELSNTQEALRQRSSALCEAQRSLQAAQTERANAEERLRAL
QRAVALLETEKRDAERQAVRLEKDKNALRNTLDKVERQKLKTEESSMRLSAEKGRLDQSL
NTAEQDLQDAQRQIALLQAQLAELEASHTASEQSVRQRDDAQREAERLRASQREAERTLA
ARERAHRQRVKGLEEQVSTLKEQLQHELRRRHPSLGSLPLSH
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccggagagtgcgcgcgcggaggggaagctggaggcggtgattcagaagctg
gaggagagcgtgttatctgaggagaagagattgacggtgcgaggcccctcccccgacgcc
ccgcccacctgcattccagcccgagtgcgagaaatcgtcaccaagaacctgagcgacagc
gggggcagtatgtcctcggttctgtctctgcaggaggagaaccgggtgctgcagagtgaa
ctcggccgcctggaggacctgctggcccacagccgcgctgaccgcgatgagctcgccatc
aaatacagcgccatcagcgagaggttggagcaggctctgcgtttggagacgggcgttggg
gacggagactgtgcggagtcgcggagtctcgcccagcagaacgtggatctgcggcggcgg
ctggaggaggagcaggccgcttacaaacgcaaactgaccgcataccaggagggccagcag
agacaggctcaactcgtccagaaactacaggccaaggttctccagtataagaagaaatgc
agtgatttggagcagactctgctggagaagtcctccgagatggaccagaacagactcagt
aatgaactgtccagtaatggtcagcggcgcggggaggatgagcccagcagtgaactcgag
acggctcttatacgtctggaggaggagcagcagagaagcagcagtctgtcagcggtcaac
gcgatgctgcgcgagcagctggagcaggccggtctggccaatgaggcgctgagccaggac
atacgcagactcactgctgattggaccaaagcgagagaggagctggagcagagggaggct
gattggaggagagaggaggagtccttccataactacttcagcagtgaacacagtcgtctg
ctggctctgtggcggcaggtggtcggcttccgcaggagtgtgtgtgagctgaagagcgcc
accgagagagacctgtcccacatgcgtaatgagctggctcaggtgtctcagagtgtgcag
ctgcagtgtgtgggggtgtgtgtggcggtccgtagccgtgaggacggctcggcgctggtt
ctggagcgcgaggcggcgcagcggagcgccctggagcagcagctcagagacagagtgacg
gagatgatgaacctgcaggccaagagcgactctgagagagctgagctcaacagcaggctg
gtggaggcagtgcgggaggtggagagactgaaggctcgagaggaagagagagagcatgag
gtcgcgtcactcaccagaaagctggaggagcagagtggggatgaagaggcggagctccac
tccctgagagttcacactgagaccctgctggacacactgagggacattgcgcaggccatg
ttatcggactcagactctggagtgttatcctcctcggcggagggcgattcagagagcagt
gctttatctttattgccctttctccgaccctcctcccctcaccgccccccgtctccgcgg
aaaccctccgtcctgctgcttccagagtccagcctctcggccttgcgctccatggtagcc
agcagacagctgcagctgcaggaggtcagaggtcgtctgcaggctgcgcagtcgtctttg
cagcagctgcgcaaacaggtggcggaggcggagtcagggaggcgggaggcggagctacgt
gtgcaggcgatgcagggagagagggatgatgctcagagagagaaagagacagccgtgaga
gagagagagaggatacggcaggagagagagagactcaccagcgagaaggacggtctagag
aaggtggcccaggcggcgcagatgaaggaacagctgctgcagctggagtgcgagaggctc
cagcaggccgcggcgtctgcgcagagagagagagaccacgagagagaggagagagaggcg
gccgtgcaggagagagagcgcgccaaagccgaggcccagagagctcagactcagtggggt
cagagtgaagctcgtggcagctctctgcgctctgaactggctgcagtgaaggaggcgctc
cagcagggggagatagagaggcagctgctggagactgagaagaaccagctcactgacgct
ctcagcagggtggagtccagcaatgctgagttgnacgctgttatagcgaagctccactct
gaggaggcagcgctgagagactctctggctaaaatgggcagcatgaacgagagcctggct
caggacaaatctgacctgaacagcatcatcatacagttggaggaggagaagagtctcctg
ctgtctcagcggagggaggcggagcaggagaaactgaccatcagagacgagctggtgcgg
ctagagcaggaccggctagagctggactccgcccgcctcgccctgcaccaatcgctgcag
gagtctgagctgctcagggcgggactggaggcggagcttcaggcgctccgagcagacagg
cagaaattacaggacaaagtcactcagctgtgtggagaggtgagctctttgggggcggag
cttggcatggcccgcggtgaaggagagcgacagggagtggctctggaggaggcggggcgg
agcagggcggagcttgctcgggaaagggcggggctagtggtccaactaacagcttctgag
agagaaaatgcggcgctgacggaggagctggctgcattcaggtcggagagggaggtgttg
gaggcgagtctgttcgaggttcagcagcagctggtgcagctggagtcccgcagagaacag
ctggaggcagagaacaccaacctgagactgcgcaatgacaacactgcagcggagctgaag
cgtttgcgtgcagaccgagacggcgccgtggctcaggctgagagagagcgggtggcgctc
aaacaggcactggcagatgcccagcaggaggcgcaaacggccctccgcaacaccctcaat
gaccaccaggaggagctagagagactcgccagcgagaaagagacactgcgctgcactctg
gagactgagcaggagggggcgctgcggcggctgcgggaggagctggaggagcagctgaag
agaatggagagagagagggaggagctacaggaggaggtccgaactttacagcaccagagg
gaccagcgcctcctgcaggccgagagcgagaaacagcaggccttgtccctgaaggagacg
gagaaggcggtgctgtcggagcgagtctgctccctgcaggctgagctcagtactgcagcc
ctggaggtggaaaaactgaccagagaagctcaaaacttgaaggaccaggagagagttgca
gtagctgctctgaatgcagagctgcaggacctgcgggagcagctggaggagacggtcagc
tcacacagccgagagctgcgcagactgcaggagagctgcactgaccaacagactcgcgca
gacacggcgctcagagagctggacgagtgtcgggctctcctgctggcgtgtgaggagagt
cgggacggcgccaggcgggacgtcctggagctggagaagcggctgtgccaaacgcgggac
accggggaggggcaccgcagggacacggtggagctgcggcgctccctcagtgacatcacc
aaagagagggatgctctcagccaatcaaacggccagctgagggaggcgctcagagcagcg
gagagcgaacgcatcagtgtgaagcgtcagtgcgaggagaaggagcagcgtctggccgtg
caggaagagactctggcgtccgcgcagaaggaggtgggggagctgcgcagctgcctgagg
gaggtggagcgatcacggctggaggccaggagagaactacaggaactgcgtagacaggtg
aaggtggtggacggggagcgggagcagaaaggcagggaggtggcggaactccaggctcgt
ttatctctggaggaccacagggaggaggagcgagggaaggagcttttctccctcaaacag
agactcgctgaggctgaggcagccaggaactccctcaaaaaagagctctcctctctgcag
aggcgtctgtgtgacagtgagtgtgtgtggcgcggctgtgagcgcgatctggccgctcag
ctgcaggaggcgcgtggttgtgagaagaagctccaggacgaggcgcggaacctctccctg
cgcgctcaggccgccgccgacgcctccactcaggtccagctgcggctcagcgaggcggag
ggccggttggccgccacggaggcggagctgacgcgctcggaggcggggcggagggacttg
gagttcaggctgatcagcctgcagtccacgctcacccgcacgctcggcatcagcgcgggg
gggcggggcagccgtggccgcagccctgcaagctcctcccactcttctgtagcgtctggg
gtcgtcccgcggcggagcagcgtgtcccctctgcgctcctcactgtcgccccctaaagat
gccgtggataaagccagtcctgataacactattacgtctcgtccgttgtctccggagcga
ggagacacgcctcttcctctcgttctgcctgagctcgactcagaaacagtccgaagcggc
ctcagagatttcctgcaggagctgcgagaggctcagagagagcgggatgaggctcgcagc
cagttgggggcgctgcagagggaactggaggaggtgacgggagaaagagactccgcccag
aaccgcctcactcacctgcataacacactgcaggagtgtcaggaaggtaagcgtggagtg
gacagcaggctgacctccactcaggctttactgcagcagcaggaggagtgtgtgaggaga
ggagagagagagaggagagcactcactgaccgggtgaacgagctggagaggactctacag
aacgcagaggcggaacgcaaacacctgcaggagcagtgcagtaagctgcgtgcgggggag
gtgcgcttggaggcggagcgccggaggctgcgggaagctctggagggggcggagtctcgg
gccactcgggtggagctggggaggcggagcctggaaggagagattcagcgtctcagagtg
tgtctcactgagcgagagacagaggcccagactacacaagagcgacacgacagcatcctc
aaacaggtggtggaggctgaggctcgtgtggcgtctctgcagagggaggtggacagactg
accgctctgctcagtaaagctcaggacgcggagggcgttcagagagagaaagctcagagt
gtttcaaacagcctgcaggaggccaccgtcgcccacagcaccacccaggggagactcgcc
acgctgcagaaacacctgaccacggccgaacaggaccgcagacagctgcaggagcgcgtg
gatgagctgcgggcggcgctgagtgaggggaaacacaccatggcgtctctcactgagcgc
gtgcagacactgcagtctgaactcacacacagccagctgcgtcgagaggagctggagacc
gaactctccaacacgcaggaggcgctgcgtcagcgctcctccgctctgtgcgaggctcag
cggagtctgcaggcggcgcagacggagcgggcgaacgcagaggagcgtctgcgagcgctg
cagagagccgtggctctgctagagacggagaagagggatgcggagaggcaggcggtgcgg
ctggagaaagacaagaacgcactcaggaacacgctggataaggtggagcgtcagaagctg
aagacggaggagagcagcatgcgtctgtctgcggagaaaggacgtctggatcagtctctg
aacacagcggagcaggacctgcaggacgcgcagagacagatagcactgctgcaggctcag
cttgcagagctggaagcgtctcacacggcgagtgagcagtctgtccgtcagcgtgacgac
gcccagcgggaggcggagcgactgagagccagtcagagagaagcagagcgaacactggct
gctcgagagagagcacacaggcagagggtgaaggggctggaggagcaggtgtccacgctg
aaggagcagctgcagcacgagttacggcgcaggcatccgtctctggggtcactaccactg
agccactga
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integrated database retrieval system
