Colossoma macropomum (tambaqui): 118799877
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Entry
118799877 CDS
T09004
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118799877 (chd5)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
118799877 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
Chromo_MIT1
AAA_22
Motif
Other DBs
NCBI-GeneID:
118799877
NCBI-ProteinID:
XP_036415850
LinkDB
All DBs
Position
Unknown
AA seq
1994 aa
AA seq
DB search
MPGSLSNEDEGQDDLDFEDDIADEDEEDERDSMPLSPLERFFSDDDSVKQKKKKPGKLKE
GKMPKVKKKKKEASVGEREDMSDRDDRGHRSESESSSYGTLKKKKKKPKEKKEKKAKWRK
KDDDDDDDDDDDGNMKEPKSSSQLMEEWGLEDVQYAFSEDDYKTITNYKAFSQFLRPLIA
KKNPKIPMSKMMTVLGAKWREFSANNPFKGSSATAVAAAVAAAVETVNVAPPISLSSIQQ
LSPTGPIKKAKTKEGKGPGAKKKSKPVKDTKKKVKAKKPKSKAGQSGKRKKASSSEEDFL
DDFSDFDDVSIHSASVRSDASGAPKKKARRGRKKRKREDGDGYETDHQDYCEVCQQGGEI
ILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDEEEEEDAAGEEEDDHM
EFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQRILHWM
WGDPPLPPEVPPARDGEKPELVAKPPLKGRPERLLFVKWSGLSYWHCSWVSELQLELYHT
VMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRKSKDPQYAAMEERFYRYGIKPEWMIIHR
ILNHSFDKDGDVHYLIKWRDLPYDQCTWEVDEFDVPDYESFKQAYWDHREQMLGEDQRPL
VVRKGKRLKEEVKRKEAPPETPVVDPTIKFDQQPWYINATGGTLHPYQLEGLNWLRFSWA
QGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFY
VVTYTGDKDSRAVIRENEFTFEDSAVKSGRKVFRMKKDTPVKFHVLLTSYELITIDQAIL
GSISWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPE
RFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQ
KKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDG
NLLVKSSGKLTLLQKMLKKLKDGGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITG
GLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHR
IGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKFG
TEELFKDDVEAIGDSKDGEEGSVIHYDDDAISKLLDRSQDATEDTEIQNMNEYLSSFKVA
QYVVREEDGEEEVQREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNY
NDTSQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLA
RVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLKGKSEKEFRAYVSLFMR
HLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHINGKYSSPELIPAG
LELKKLTESLSSDPNTPVPASPAPTQPSTPVPSDKPEGGPGPQEDKEATDQESTKPADSE
TPKESELSPTPEKTSESEEVKRSNPEERNSEESEKKDNMPSPTEPSANQTQPSSKQIEQS
TSQNQTTSTGEQSKDMESAAEKSESDSTAVKVEDKEQKPAAPHELKSEDAAETQLNGDKE
ARDEADESHKDDKNGTKMRFMFNIADGGFTELHTLWQNEERVAVSSGKMYDIWHRRHDYW
LLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMNKGNYLEMKNKFLARRFKLLEQALVIE
EQLRRAAYLNMTQDASHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQ
LEELLSDMKADVTRLPSMLSRIPPVSARLQMSERSILSRLTSRGNEPPQQPFPQGSFGCS
QMYSNSFGGGFRGPGGTPMVNYSQMPLGPYVSVSSNGPPPPSSLLDKKSSDALRDLSPPE
LKSGKPTDVICIED
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatcgctgagcaatgaagacgaggggcaagacgatttggattttgaagacgac
atagcagatgaggatgaagaggacgagcgtgacagtatgccgctctcacctttggagcgc
ttcttctccgacgatgactcagtcaaacagaagaagaagaagcccggcaagctgaaggaa
ggcaagatgccgaaagtaaagaagaagaagaaagaggccagcgttggtgagcgtgaggac
atgtcggacagggacgatcgtggacaccggtcagagagcgagagcagcagttacggcaca
ctgaagaagaaaaagaagaagcccaaagagaagaaggagaagaaagccaagtggagaaaa
aaagatgacgatgatgacgacgacgatgatgatgatggaaatatgaaggagcccaagtct
tcgagccagctgatggaggaatggggtctggaggacgtgcagtacgccttctctgaggac
gactacaaaaccatcaccaactacaaggctttcagccagtttctcaggcccctcattgcc
aagaagaaccctaaaatcccaatgtccaagatgatgacagtgttaggagccaaatggagg
gagttcagcgccaacaacccgttcaaaggctcctccgccacggccgtggctgccgctgtg
gccgctgcagtggaaacggtcaacgtggcccctcccatctctcttagcagtattcagcaa
ctttctccaacggggccaatcaaaaaagccaaaaccaaagaggggaaggggcctggtgct
aagaagaagagtaaaccggtgaaggacacgaaaaagaaagtgaaagccaagaagcccaaa
tcaaaggcaggccagagcggcaagaggaaaaaagcctcctcgagcgaggaggatttctta
gacgacttctcagactttgatgatgtcagcatccacagtgcctctgttcgttccgacgcc
tcgggggcacccaagaaaaaagcccgccgaggacgcaaaaagaggaaaagagaggatgga
gacggatacgagacggatcatcaggattactgtgaggtgtgtcagcaggggggcgagatt
attctgtgtgacacttgccccagagcctatcacctggtgtgtctcgacccggagctggag
aaagccccggaggggaagtggagctgcccccactgcgagaaggagggcattcagtgggag
gccaaagatgatgaggaagaggaggaggatgctgcaggtgaggaagaagatgaccacatg
gagttctgtcgagtgtgtaaggatggtggggagctgctgtgctgtgatacgtgtccctcc
tcctatcacatccactgcctcaacccgccgttgcccgagatacccaacggagagtggctg
tgtccgcggtgtatgtgcccccctcttaaaggcaaagttcagaggattctgcactggatg
tggggggatcctccgttaccccccgaagttcctccggcccgggacggagagaagccagaa
cttgtggccaaacccccgctaaagggccgaccggagaggctgctgtttgttaagtggtct
ggactgtcctactggcactgttcttgggtcagcgagttacagctggagctgtaccacacg
gtcatgtaccggaactaccagaggaagaacgacatggatgaacccccaccatacgattac
ggctctggggaggaggaactcaacaacgagaagaggaaaagtaaagacccgcagtacgcc
gccatggaggagcgattctaccgctacggcatcaaacctgagtggatgatcatccatagg
atcctcaaccacagtttcgataaggatggagacgttcattacttgatcaaatggagagac
ctgccgtatgaccagtgcacctgggaggtggacgaatttgacgtcccagactatgagagc
tttaaacaggcctattgggaccacagagagcagatgcttggcgaggaccagcgcccccta
gtggtgaggaaagggaagagactcaaagaggaagtgaagaggaaagaggctcctcctgaa
actccagttgtcgatcccactatcaagtttgaccagcagccatggtacatcaatgccacg
gggggaacgctgcacccgtaccagctggagggcctgaattggctgcgtttctcttgggct
cagggcaccgacaccatcctggctgatgagatgggcctgggcaagaccgtccagactata
gtgttcctctactcactctacaaagagggtcattctaaggggccttttctggtcagtgcc
cctctgtccaccattatcaactgggagagagagtttgagatgtgggcaccggatttctat
gtggtgacgtacacaggggacaaagacagccgggcagttatacgggagaacgagttcacc
tttgaggacagtgccgtcaaatctggacgcaaggttttccgtatgaagaaagacactcct
gtgaagttccatgtgctgctaacctcatatgagctgatcaccattgaccaggccattctg
ggctccattagctgggcctgtctagtagtggatgaagcccacagactgaagaacaaccag
tctaagtttttcagaatcctgaatggctataagatctattacaaactgctcctcactgga
actccgttgcagaacaatctagaagagttattccacctacttaacttcctcaccccagag
cgcttcaataatctggagggctttctggaggagtttgcggacatctctaaggaagaccag
ataaagaagctgcacgacctgctggggccgcacatgctcaggaggctgaaggcggacgtc
ttcaaaaacatgccggcaaagacggagctcattgtccgagtggagctcagccccatgcag
aagaagtactataagttcattctgacgcggaactttgaggcgctgaactctaaaggaggt
ggaaaccaggtttctctgctcaacatcatgatggacctgaagaaatgctgcaatcacccc
tacctgttccctgtggctgctgtggaggcgccggtgttacccaatggctcttatgatggc
aacctactggtgaagtcctcaggcaaactcactctgcttcagaagatgctgaagaagctc
aaagacggagggcatcgggtccttattttctcgcagatgactaagatgctggacctgtta
gaggactttctggagtttgaaggctataaatacgagcgtattgatgggggcatcacaggg
ggactgcggcaggaggccattgatcgctttaacgctccgggggcgcagcagttctgtttc
ttgctgtccacacgtgccgggggattggggatcaatctggcaaccgctgatacagttatc
atttatgactctgactggaacccgcacaacgatatccaggcgttcagccgagcacatcgc
attgggcagaacaagaaagtgatgatctatcgcttcgtaacacgagcgtccgtggaggag
cgcatcactcaggtggccaaacgcaagatgatgctgacccacctggtagtgcgaccaggt
ttagggtccaaaacgggctccatgtccaaacaggagctggatgacatcctcaagtttggc
actgaggagctcttcaaagatgatgtggaagctataggggacagtaaggacggagaggag
ggcagtgtgatccactacgatgatgatgccatctccaaactgctggaccgcagccaagac
gccacagaggacacagagattcagaacatgaacgagtatctcagctccttcaaggtggcg
cagtacgtggtccgggaagaggacggagaggaggaggttcagagggagattattaagcag
gaggagaatgtggatccagattactgggagaagctcctgcggcatcattatgaacagcag
caagaggacctggcccgcaatctgggcaaaggcaaacgcatccgcaagcaggtcaactac
aacgacacctctcaggaggaccaagaatggcaggatgatctttcagacaatcagtccgaa
tactctgtggggtccgaggatgaggatgaagatttcgaggagaggcctgaaggagggcgc
cggcagtcccgcaggcagctgaagagtgaccgggacaaaccactgcccccactactggct
agggtagggggaaatatagaggtgctgggttttaatgcacgtcagaggaaggccttcctg
aatgcgatcatgcgctgggggatgcctccacaggacgcatttaactcacactggctggtc
agggacctgaagggcaagagtgagaaggagttcagagcatacgtgtcattgtttatgagg
cacctgtgtgagccgggagcagacggggcggagacattcgcagacggtgtaccgagagag
ggtctgtcccgacagcacgtcctcaccaggatcggagtcatgtctctggttcgtaagaag
gtgcaggagtttgagcacataaatggtaaatacagttctccggagctgattcctgcaggc
ctggagttgaagaaattgactgagagtttatcatctgaccccaacactcctgttccagcc
agccctgctccaacacagcccagcacacctgtaccctcagacaagcctgagggtggtcct
ggtcctcaagaagacaaagaggctactgaccaggagagcaccaaacctgcagattctgag
acacccaaagaatcagaactgtcccctacacccgagaaaaccagtgagagcgaagaagtg
aagagaagcaaccctgaggagaggaatagtgaagagagtgaaaagaaagacaacatgccc
tctccaacagagccatcagccaatcagacgcaaccttcgtccaaacagatagagcagtcc
accagtcagaaccagacaacatctacaggtgagcaaagtaaagacatggagagcgcagcc
gagaaatcagagagtgactctactgcagtgaaagtggaggataaagaacaaaagccagct
gctccccacgagttaaaatccgaggatgctgccgagactcaactgaacggagataaagaa
gcgagggatgaggcagacgagagccacaaagacgacaaaaacggcaccaagatgcgattc
atgttcaacatcgcagacggaggctttacagagctgcacactctgtggcagaacgaagag
cgcgtagccgtgtcatctggcaagatgtacgacatctggcaccgtcggcacgactactgg
ctgctggctggcatcgtaacccatggctatgcacgctggcaggacatccagaacgacccg
cgctacgccatcctcaacgagccctttaagaccgagatgaacaaaggcaactacctggag
atgaagaacaagttcctggcacggcgtttcaaactgttggagcaggctctggttatagaa
gagcagttgcgcagggcggcctatctgaacatgacccaggacgccagccatcctgccatg
gccctgaacacacgcttcgctgaggtcgagtgcctggccgaatcccaccagcacctctcc
aaagagtccctggctggcaacaagccagctaatgccgtcctgcataaagttttaaaccag
ctggaggagctactgagtgatatgaaggcagatgtaacgcggctgccctctatgctttcc
cgtatccctcccgtgtccgcgcggctgcagatgtcggagaggagcatccttagccgactc
acgagccggggcaacgagccgccacagcagcctttcccccagggctcatttggttgttct
cagatgtacagtaacagctttgggggaggattcagagggcctggtgggacacccatggtc
aactatagccagatgcccctgggaccatatgtcagtgtgtcctcaaacggccccccaccg
cccagcagcctcctagacaagaagtccagcgacgctctgagggacctgtccccccctgag
ctgaaatccggcaagcccactgatgtcatctgcattgaagattag
DBGET
integrated database retrieval system
