KEGG   Colossoma macropomum (tambaqui): 118799930
Entry
118799930         CDS       T09004                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmao03009]
    118799930 (rrp9)
Ribosome biogenesis [BR:cmao03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    118799930 (rrp9)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_IFT140_1st WDR54 Ntox15 Beta-prop_WDR19_1st Beta-prop_RIG_1st DUF5836
Other DBs
NCBI-GeneID: 118799930
NCBI-ProteinID: XP_036415944
LinkDB
Position
Unknown
AA seq 481 aa
MSSFFIKKKSASAAPGKGDRTAGQKRKGDNIGGKGRSKSFNKRLNEEISSESENEGDDGP
NRKRKGNEEVDEEIEETPQEKKLRLAKLYLEQLREEEEKKAEAEEFESDLIAGRLQEDVL
EQKGKLQRLIAKELVAPDPAEIRLLRGHKLSVTCLVITPDEKYIFSASKDCSIIKWEVES
GKKVQKIAGGRKGTEDRHVGHTAHILCMAISSDGKYLATGDMNKLIMIWEAATCKFLYKF
TGHRDAVSGLAFRRGTHDLYSASHDRSVKVWNVDENAYVETLFGHQDVITGLDCLGRERC
VTAGGRDRTIRVWKIAEESQLVFHGHEGSIDCIQLINEEHMVSGGDDGCVCIWSVNKKRP
VSKVKQAHGLHGSAGLEEPNWVSSVAALHNSDTVASGASGSHNSAVQLWKCGQGFRGLEP
LFSIPVTGFVNSLKFSNSGKFLVAGVGQEHRLGRWWRTKEAKNGLYIIPLKRQNTEQEVE
Q
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgtcgtctttcttcattaagaagaaatcagcctcggcggctccgggtaaaggagacagg
actgccggtcagaagcgaaagggtgataacatcggtggaaaaggacgttcaaaaagcttc
aacaaacgactgaatgaggaaatatccagcgagtcagaaaacgaaggcgatgatggaccg
aacaggaaacggaaaggaaacgaggaggtggatgaggagatcgaggagacgcctcaggag
aagaagctgcgactggccaaactttacctggagcagctgcgagaggaggaggagaaaaag
gcagaggctgaggagttcgagtcagacctgattgctggacgattacaggaggatgtgctg
gagcagaaaggcaagctgcagaggctgatagctaaagagcttgtagccccggatcctgca
gaaatcaggctgttgagaggacacaaactgtccgtcacgtgcctggtcatcaccccagat
gagaaatacatcttctccgcgtctaaagactgctccatcatcaaatgggaggtggagagt
gggaagaaggtgcagaagattgcaggtggaaggaagggaacggaggatcggcacgtcggc
cacacagcacacatcctctgcatggccatctcttcagacggaaaatacctggcgacggga
gatatgaacaagctgatcatgatttgggaagcagctacatgtaaatttctctacaagttc
acaggacacagagatgctgtatcgggtttggccttcaggagaggaacacatgacctgtac
agtgcctcccatgaccgctcggtcaaagtgtggaatgtggatgagaacgcttatgtagaa
actctgtttggccatcaggatgtgatcacaggtctggactgcctgggccgtgagcggtgt
gtgacggccggggggcgggacagaacgatcagagtgtggaaaatcgcagaggagtcccag
ctcgtctttcacggtcatgagggctccatcgattgtattcagctcataaacgaagaacac
atggtttcaggtggtgacgacggctgtgtgtgcatctggtctgtgaacaagaagaggccg
gtgagcaaggtgaagcaggcccatggtctccatggcagcgccgggctggaagagcccaac
tgggtgtcatcagtggcagcactgcacaactccgacaccgtggcctcaggtgcctcaggc
tctcataattccgctgtgcagctgtggaagtgtggacagggcttccgaggcttggaaccc
ctttttagcatcccagtgactggttttgtgaatagtttgaaattctccaattctggaaag
ttcttggtggctggcgtcggacaggagcacagactgggccggtggtggagaacaaaggaa
gcgaagaatggactctacatcattcctctcaaaagacagaacacagagcaagaggttgag
caatag

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