Colossoma macropomum (tambaqui): 118800018
Help
Entry
118800018 CDS
T09004
Symbol
snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118800018 (snrpe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118800018 (snrpe)
03041 Spliceosome [BR:
cmao03041
]
118800018 (snrpe)
03032 DNA replication proteins [BR:
cmao03032
]
118800018 (snrpe)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
118800018 (snrpe)
Spliceosome [BR:
cmao03041
]
Complex A
U1 snRNP components
Sm proteins
118800018 (snrpe)
U2 snRNP components
118800018 (snrpe)
Complex B
U1 snRNP components
118800018 (snrpe)
U4/U6.U5 tri-snRNP components
118800018 (snrpe)
Complex C
U2 snRNP components
118800018 (snrpe)
DNA replication proteins [BR:
cmao03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
118800018 (snrpe)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
DUF777
Motif
Other DBs
NCBI-GeneID:
118800018
NCBI-ProteinID:
XP_036416059
LinkDB
All DBs
Position
Unknown
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRIMLKGDNITLLQSVSN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagggggcaagggcagaaggtgcagaaggtgatggtgcagcccatcaatctt
attttcaggtatctgcagaatcgctcccgtatccaggtctggctttatgaacaggtcaac
atgcggatagaaggctgcattattggttttgacgagtacatgaacttggttctggatgat
gcagaggaagtccacatgaagacgaagaacagaaagcccctggggaggatcatgttgaag
ggagacaacatcacactgctacagagtgtgtcaaattaa
DBGET
integrated database retrieval system
