Colossoma macropomum (tambaqui): 118800022
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Entry
118800022 CDS
T09004
Symbol
rbm15b
Name
(RefSeq) putative RNA-binding protein 15B
KO
K13190
RNA-binding protein 15
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118800022 (rbm15b)
03041 Spliceosome [BR:
cmao03041
]
118800022 (rbm15b)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
118800022 (rbm15b)
Spliceosome [BR:
cmao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118800022 (rbm15b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_7
RRM_3
RRM_occluded
Nup35_RRM_2
UCR_Fe-S_N
Motif
Other DBs
NCBI-GeneID:
118800022
NCBI-ProteinID:
XP_036416063
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MKRQADRDASPARAAAKRLRERERERERERERDRERDREREGSRREDAIAAAAAAAAVAA
AAAAPPAALLPSPPLALLLADSRYVKREARGGEREKARARDESSAHHRLHHDASVRSGQR
AAGKGKGSAGTELLGGRVAGAAGGAAGSSSGLEYKTLLVSNLGSHLSDEHIEDELFHEFK
KFGDVSVKLSHTPELGRVAYVNFRQVESAREARHARARLVLGDRPLRVEPVYVRRRSCTP
PDVAYAPLLHAAYPYRQRSLSPGAGGSAMRDARARHYAEGVVGLTRERERLLDYYSALEE
RSRALALQLQAEDDLKPEDDQRATRNLFIGNLDHNVSEAELRQGFEKYGVIEEVVIKRPA
RGQGCAYAFIKFQNLDMAHRAKVAMQGRVFGGNQVKIGYGKANPTTRLWVGGLGPNVSLA
ALAREFDRFGSIRTIDYVKGDNFAYIHYESLDAAQAACAQMRGFPLGGPNRRLRVDFAKA
EEVRAYPQQYQLPLPLPSHYELLSDGYARHRSLERELRARARSPSHPLFAERERERGISE
RDWSPPKGPERRTSTEAFGRGRARSRSRERWAKDRDSDRKGWDERRKRRSRSRSRSVSPS
ERLFEERGRARVRAGAPSTPEDSPDRARGRLPDSTSEPQSHTPDSSHQSSDERPQSQDDS
AQHRKGGEHERNHRKSEPDLDAQIDKCKSEPKKLSTLSEYAQTLSRVWHGSLVLKNSSFP
TNMHILEGGASFFLSLMKDNQTGSAKITQLKIAQRLRLDQPKLDEVTRRIKLGSPDGYTV
LLAVQGPMDRDSPPPEPGLQKRLLRNLVTYLRNKQAAGVISLPLGGPKERETGGMLYAFP
PCEFSQQYLQTALKTLGKIEEEHLVIVVVKDSL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggcaggccgaccgcgatgcgagccccgcgcgagccgccgctaaacggcttcgg
gagcgtgagagggaacgggaacgggaacgagagcgggatcgggaacgggaccgggagcgc
gagggcagccgtagggaggacgccatcgccgctgcggctgccgccgccgccgtggctgcc
gccgctgctgctcctcctgcggcgctgcttccttcgccgccgctcgcgctgttgctcgcc
gacagccgctatgtgaagcgcgaagctcgcggtggcgaacgcgagaaggctcgcgcgcgc
gacgaaagcagcgcgcatcatcgcttgcaccacgacgcaagcgtgcggtccggccagcgg
gctgcaggaaagggcaaagggtcagcgggcaccgagctcctcggtggtcgtgtggccggg
gccgcgggcggtgctgctggaagtagcagtggcctcgaatataagacgctgctggtcagc
aacctgggttcacacctgtccgacgagcacatcgaggacgagctcttccatgagttcaag
aagtttggtgacgtgagtgtgaagctctctcacacgcccgagctgggccgggtggcctat
gtgaacttcaggcaggtggagagtgcccgggaggcacgccatgccagggcccggctggtg
ctgggtgaccgtccgctccgggtggagccggtttatgtgcgccgccgcagctgcacgccg
ccggacgtggcctacgctcccctgctgcacgccgcttatccgtacaggcagcgatcgctc
tcgccaggagctggaggcagtgccatgcgggacgctcgagccaggcattacgccgagggt
gttgtcgggcttaccagggagcgagagcgactcttggactattacagtgctttggaggag
aggagccgtgcccttgcattacagctgcaggccgaggacgacctgaaacccgaggatgac
cagagagccactagaaatctgtttatcggcaacctggatcacaatgtgtcggaggcggag
ctcaggcagggtttcgagaagtatggtgttattgaggaggttgtgatcaagcggccggcc
cgcggacaaggatgcgcctatgctttcatcaagttccaaaacttggacatggctcacagg
gccaaggtggccatgcagggccgggtgttcgggggcaaccaggtgaagattggctacggc
aaggccaatcccaccacacgcctatgggtgggtggcttgggccccaatgtgtcgctggcc
gccttggccagagagttcgaccgcttcgggagcatccgcaccattgactatgtgaaagga
gacaactttgcctacatccactatgagagcctggatgcagcccaggctgcgtgtgcacag
atgcgtggcttccccctgggtggccccaaccgtaggctgcgtgtggatttcgccaaagct
gaggaggtgcgggcatacccccagcagtaccagctgccccttccattgccatcacattat
gagctcctaagtgatggttacgcgcgccaccgcagcttggagagagaactaagggcgcgg
gctcgatcaccatcccacccgctttttgctgagagggaacgggaacgtgggatctcagag
cgcgattggagtcctcctaagggcccggagcgtagaactagcacagaagcctttggtcga
ggaagagcccgcagtcgcagcagggagcgctgggccaaggacagagactcggaccgcaaa
ggctgggacgagcggcgcaagcgtcggagccgcagccggagtcggagtgtcagtcccagt
gagcgcctgtttgaggagaggggtcgcgccagagtgagagcgggtgccccctccactcca
gaggacagcccggaccgggctcgtggtcgcctccctgactccacctccgaaccccaaagc
cacactcctgacagcagccaccagtccagtgatgagcggccccagtcacaggatgattca
gcccagcaccgcaaaggtggggagcatgagcgcaaccatcgcaagagcgagccagacctg
gacgcacagatagacaagtgcaagagcgagccaaaaaagctcagcacactgtccgaatat
gcccagaccctcagcagagtgtggcacggctccttggtcctgaagaacagcagcttcccc
accaacatgcacatcctggaaggaggagccagcttcttcctctccctcatgaaagacaac
cagacgggcagtgccaagatcacccagctcaagatagcccagcgactgcggctggaccag
cccaagctggacgaggtgacccgccgcatcaagctgggcagccccgatggctacaccgtc
ctcctggccgtgcagggcccaatggaccgggactcgccgcctccagagccgggcctccag
aagcgccttctccggaacctggtcacctacctcagaaacaagcaggcagccggtgtcatc
agcctgcccctcggcgggcccaaagagcgcgagacggggggtatgctatacgctttcccc
ccttgcgagttctcccaacagtaccttcagactgctctgaaaacactgggcaaaatagag
gaggagcaccttgttattgtggttgttaaagactcactttaa
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