Colossoma macropomum (tambaqui): 118800060
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Entry
118800060 CDS
T09004
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cmao00535
]
118800060 (optc)
Proteoglycans [BR:
cmao00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
118800060 (optc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_9
LRR_5
LRR_14
Motif
Other DBs
NCBI-GeneID:
118800060
NCBI-ProteinID:
XP_036416100
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MALYISVLAVALLGSCWGAPPPDSDPAAYDLENYDEDSDTWDLNSYGETFDYDDLDEEIE
VGTVAPLPAVTQPPPAIVPEDYTEEVTLAPRTTKPLVLPTLDFLGPGLFGPETGLGMPTC
LLCVCISGSVYCDDADLTEIPPLPKDTTHFYARFNKITEVKAKDFLNLNQLKRIDLTGNQ
ITTLGEEAFLSLPQLQELLLADNKVQALPGLPATMRHIDIRNNRLKSTGMHREGFKDMKD
LQFLYLSGNQLDYIPGPLPESLRVLHLQNNNIQSLNQDTFCNSHDMNYIRKALEDIRLDG
NPVDVNQYPQAYVCLPRLPVGTPH
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtacatatctgttctagctgtagccctgctaggatcctgttggggagctcct
ccacctgactctgatcctgcggcttatgacctggagaactatgacgaggactcagacaca
tgggacctgaacagctatggagaaacctttgactatgatgacttggatgaggagattgag
gttgggactgtggctcctcttccagctgtcactcaaccacctcctgcaattgttcctgaa
gactacacagaagaggtgacccttgcaccaaggaccaccaaacctctagtccttcccaca
ctggacttcctgggccctggcctgtttggcccagagacaggcctggggatgcccacttgc
ctgctgtgtgtgtgcatcagtggcagtgtgtattgtgacgacgctgatttaactgagatc
ccccctctgcccaaggacacgacacacttctacgctcgcttcaacaagatcactgaggtc
aaggccaaagatttcctcaacttgaatcagctgaaacggattgaccttacggggaatcag
atcaccacgctaggagaagaagccttcctctctcttccacagctccaggaactgcttctg
gctgataacaaggtccaggcactgccagggctgccagccactatgaggcacatcgacatc
cgcaacaaccgcctgaagagtactggaatgcacagagagggctttaaggatatgaaagac
ttgcagttcctgtacctgtcaggcaaccagttagactacatccctggtccgctgcccgag
agtctacgggtgcttcacctgcagaacaacaacatccagagcttgaaccaggacaccttc
tgcaacagccacgacatgaactacatccgcaaggctctggaagacatcaggttggatggc
aaccctgtggatgtgaatcagtatccgcaggcctatgtgtgtctgccacggctgcctgta
ggaaccccacactga
DBGET
integrated database retrieval system
