Colossoma macropomum (tambaqui): 118800160
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Entry
118800160 CDS
T09004
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03420
Nucleotide excision repair
cmao04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118800160 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
118800160 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cmao03051
]
118800160 (rad23aa)
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118800160 (rad23aa)
Proteasome [BR:
cmao03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
118800160 (rad23aa)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118800160 (rad23aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
UBA_3
Rad60-SLD_2
Crinkler
UBA_UBAP2
OTU1_UBXL
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
118800160
NCBI-ProteinID:
XP_036416224
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MQITLKTLQQQTIHIDIDDDQTVKALKEKIEAEKGRDSFPVSGQKLIYAGKILQDDTPIK
EYKIDEKNFVVVMVSKPKPPPAPEPPKSVSTATPSSSSSTPPVPCPAAIPFFSDEETSPC
DPPATVSPTHSPEHPGLGEEEEDSSSVLDPEYQSMLTQIMSMGYEKERVVAALRASFNDP
NRAVEYLLNGIPTVPVQETSPASARIPGTDTHSTEGENPLEFLRSQPQFQNMRHLVQQNP
SLLPSLLQQLGRENPELLQQIRQHQELFIQMLNAPAGEGPEGAEHADLGAMGDEGAPVDY
IQVTAQEKEAIERLKALGFPEALVVQAYFACEKNENLAANFLLNQDE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaccctgaagaccctgcagcagcaaaccattcatatcgacatcgacgacgac
cagacggtgaaggccttgaaagaaaagatagaggcagagaaaggcagggacagttttcca
gtttcaggacagaagctgatctatgcgggcaaaattctgcaagacgatacgccgatcaaa
gagtacaaaatcgatgagaagaactttgtcgttgtcatggtatcgaagccaaagcctcca
ccagcacctgagccgccaaagtctgtttccacagcaacaccatcgtcctcctcttccact
ccccctgttccctgtccagcagctatacctttcttctctgatgaggaaacatcaccatgt
gacccccctgctacagtctcaccgacacacagcccggaacatcctggtcttggtgaagaa
gaagaggattcatcttcagtattagatccggagtaccagtctatgttaacacagatcatg
tctatgggctatgagaaggagagagtggtggccgctctgagggccagtttcaatgaccct
aaccgcgctgtggagtacctacttaatggtattcctacagtccctgtgcaggagaccagc
cctgcatctgcccgcatacctggcacagacacacactcaactgagggagagaaccctctg
gagttcttgcgttctcagccacagttccagaacatgcgacatctggtccagcagaaccca
tccttactgccgtcgctgctgcagcagctgggccgagagaaccccgagctcctgcagcaa
atcagacaacaccaggagctgtttattcagatgctgaatgcaccggcgggggaggggcct
gagggggctgagcatgctgacctgggagctatgggagatgaaggagcacctgtggattac
atccaggttacagcacaggagaaagaggccattgagaggttaaaagctctgggtttcccc
gaggcactggtggtgcaggcgtatttcgcctgtgagaagaacgaaaacctggccgcaaac
ttcctgctcaatcaggatgaatga
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integrated database retrieval system
