Colossoma macropomum (tambaqui): 118800676
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Entry
118800676 CDS
T09004
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04270
Vascular smooth muscle contraction
cmao04625
C-type lectin receptor signaling pathway
cmao04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118800676 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118800676 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
118800676 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118800676 (arhgef12a)
Membrane trafficking [BR:
cmao04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118800676 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
PH
Motif
Other DBs
NCBI-GeneID:
118800676
NCBI-ProteinID:
XP_036416801
LinkDB
All DBs
Position
Unknown
AA seq
1410 aa
AA seq
DB search
MSDTQPTVTERFPKKANRTSSILSRDHPPDKRPKSDKPAIPPVHDSTFDSTALVQKSGCA
VAEGTPESCGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKV
NGTLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSEVDLNLGPVEGHGASSAMFP
HSPRQSACNLEYKAAKRASSPLVTWEENNIVHSLKADILQRMLAKERQELQEMKEEYSRN
PTPKLLRDIQEAKKHIPQLQSQLTRVIQDGLQMEDSEDGVLDVDQTTSDGFWSSVLRSYH
PASPESLCQRDSSSPKSTPRDSLNSCPSPETEDTSDLDSHLRSTVGSPSFRMASQIIGAE
DDYFDSEQEQLNGQCSCFQSVELLKSRPAHLAAFLHHVVSQFDPAPVLCYLYADLYKQTN
SKETRRIFLDFLTLFIDRGANLKVAVPESISSELERRRPELIPEDLHRQFVQTMQDALLP
EVLKILEDFRQKRNMGLTLADGELAHLDSEQIRDSAALERERFCAENIVSKIDDVLFTSQ
ASEEEKCNTIQYVIFTYMKHLGVRSKEQRNLESKRVRINFLPKIKKSSKPEKEGEEKVKK
PRFNILGPSFRPNRIDAPFAAGRSVDGSKQRPQKQLSQPVIGTCEPVDGVRLRGSQSSEG
SDFTQNPAFIAASPGSAPYSPASDTSFRDSDCGGSPSSVISRLTEGMQAGEGLDGPYPPC
DYIPYSLEQLEEERDGDRLQDVGTPKLSRRLEEVLSEDDGGGSVYSDVDPPNWQQLVGRE
VLAGLTPHEIKRQEVINELFYTERAHVRMLKVLDNVFYQKLTRDNILPPADIKNIFTNLE
EIIQLHVTISEQMAGIRKRNESSVVDQIGDDLLSWFSGGEEEKMKRAVGTFCSNQPFALE
LIKSRQKKDQRFITFMQEAESNRLCRRLQLKDIIPAEMQRLTKYPLLLENIAKYTDDIEE
KDKVRRAADCCRKILNHVNQAVKESENTQRLEDYQRRLDLSSLKQSENPLISEFKNLDLT
KRKLIHEGPLTWKLNKDKTVELYTLLLEDVLVLLQKQDERLILKCHSKNRAGTVDTQHIF
SPVIKLSTVLVRSVATDNRSFFVLSMSDNGAQIYELMAQTVSEQRTWQRQITQRAEVMKA
KPHTVIPLPQSAGERDSMEVGKPNKGPERTSSGSMRPSDKVRGRTSVALHGSSPTSNPEE
EEQSHDTGREEGSYLDSELLDGRDAYSLSSSSRAEEALKTLAALKQVLVTQLMAHDDGER
LGRPLGGRLLRTTSLRTPVEHSSGRSACRAQDAASGDTGFYEGSEDYGDSYLVLEGYGGS
GESSTDDDVQVGGMELGLSRGCAADSGISLRFSSASVESMCRLSRQVLTHLRDLQANLNH
LKEVESRYYSMLRQRHAESSADTGESRDKK
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacagccaacagtgacggagagatttcccaaaaaagcaaacagaaccagt
agtattctcagcagagaccatccccctgacaagaggcccaaaagtgacaaacctgccatt
cctccagtgcatgactctacatttgactctacagcgctggtacagaagagtggatgtgca
gtggccgagggaacccccgagtcatgtggactggttcagagatgtgtgatcattcagaaa
gatgagaatggctttgggttaaccgtgagcggagacaaccctgtgtttgtgcaacttgtc
aaagaggatggcgctgccatgcgtgcaggtgttcagactggggacaggatcattaaggtt
aatggaaccctggtgacacattcaaaccacgtggaagtagtgaagttaatcaaatcgggc
tcctatgtggccctcacagtactgggacgaccccctgggttaccccagatccctctttcg
gaggttgatttgaacctagggccggtagagggtcatggagcatcctcagccatgttccct
cactctccaaggcaaagtgcgtgcaacctggagtacaaagctgcaaagcgtgcctcctct
ccactggtaacatgggaggagaacaacattgtgcacagcttaaaagcagacatcttgcag
aggatgctggccaaagagcgtcaagagttacaggagatgaaggaggaatacagcaggaac
cccacacccaaactgctgagggacatccaagaagccaaaaaacacatcccacagcttcag
agtcagctcaccagagtaatacaggatggcctgcaaatggaggacagtgaggatggtgta
ctggacgttgaccagaccacctcagatgggttctggagctccgtcctgcgtagctaccac
ccggcctcaccggagagcctttgtcaaagagactcaagcagtccaaagagcacacctcgt
gatagcctcaactcctgcccttcccctgagacagaggacacttctgacctggactcccac
ctccgttctactgtggggagtccttccttccgcatggcctctcagatcatcggtgctgag
gatgactacttcgattcagagcaggagcagttgaatggccagtgtagttgtttccagagt
gtggaactgctgaagtcccggcccgcccacctagcagccttcttgcaccatgtggtctct
cagttcgaccctgctcctgtgctttgttacctttacgctgacctctacaagcaaaccaac
tccaaagaaacccgtcgcatcttcttggactttctcaccttgttcattgaccggggggct
aacttaaaagtagctgtgcccgaatccatctcttctgaacttgaacggcggaggccagaa
ctgattcctgaggacttgcacagacagtttgttcagacaatgcaggatgcgcttcttcct
gaagttctgaagattctggaggactttagacagaagcgtaatatgggactgaccctggct
gatggggaactggctcatctggactctgaacaaattagagacagcgctgctctggagagg
gaaagattctgcgccgagaacattgtctccaagatagatgacgtcttgttcacttcgcaa
gcctcagaagaagagaagtgcaatacaatacagtatgtgatcttcacctacatgaagcac
cttggtgtgaggagcaaggaacaacgcaacctggagtctaagcgtgtgcgcatcaatttt
ctccccaaaataaagaaaagcagcaagccagagaaggagggagaggagaaggtgaagaag
ccccgttttaacatcctgggaccctcattccggcccaaccgcattgatgctccattcgca
gcagggcgttctgtggacggtagcaagcagaggcctcagaagcagctgtcccagccagtg
attggaacatgtgagccagtagatggtgtgcgtttgcgtggcagccaatctagcgagggc
tccgactttactcagaatcctgctttcattgctgcatccccaggcagtgccccctacagc
cctgcctcagacacttccttcagagattcagactgtggtgggagcccatcctctgtgatt
tcgcgactgaccgagggtatgcaagcaggagagggcctggatggcccttatcctccctgt
gattacatcccctacagcctggagcagctggaagaggagagggatggtgacagactccag
gatgtgggcacgcctaagctgagcaggaggctagaggaggtgctgagtgaggatgatggc
ggtggcagcgtttactctgatgtggatcctccgaactggcagcagctggtggggcgggag
gttttggctggactgactcctcatgagatcaagagacaggaagtcattaacgaactgttc
tacaccgagcgtgcacatgtacgcatgctgaaagtcctggataatgtcttctaccaaaaa
ctgacccgagacaatatactgccccctgctgacatcaaaaacatcttcaccaaccttgag
gagatcatccagctccatgtgacaatatcggagcagatggcaggcatacgcaagagaaat
gagtcatcagttgttgaccaaattggagatgatttgctgtcttggttcagtggtggagag
gaggagaagatgaagcgggcagtaggaaccttttgcagcaaccagccctttgctctggag
ctcatcaagagccggcagaagaaggaccaacgtttcatcaccttcatgcaggaggcggag
agtaatcggttgtgtcggaggctgcagctgaaggacatcattccggccgagatgcagaga
ctcactaagtacccattgctgctggagaatatcgccaagtacaccgatgacattgaggag
aaagacaaggtgaggagggcggctgattgctgtcggaagatcttgaaccacgtaaaccag
gcagtgaaagagtcagagaatacacagcggctggaggactaccagagacgcctggacctc
tcctcactgaagcagagtgagaatccactcatctccgaatttaagaatctggatctaacc
aagaggaagctgatccacgaaggtccgctgacctggaagttgaacaaagacaagactgtt
gagttatacactctgctcctggaggacgtcctggtcctgttgcaaaagcaggatgagaga
ctaattctgaaatgccacagtaagaaccgggccggcactgtcgacactcagcacatcttc
agccctgtcatcaagctcagcactgtactggtccgttctgtggccacagataacagatcc
ttctttgtgctctccatgtcggacaatggagcccagatctatgagctgatggcccagaca
gtgtctgaacaaagaacgtggcagagacagatcactcaacgagcagaggtgatgaaggcc
aaaccccacactgtcattcctctgcctcagtctgctggggaaagagacagcatggaggtt
ggtaaacccaataaaggcccagagcgcacatcatctggcagcatgcggccctcagataaa
gttcgtggcaggacgtctgttgccctgcacggctccagtcccacctccaaccctgaggaa
gaagagcagagtcatgacactggtcgggaagaaggctcttatctggactcagagctgctg
gacggccgggacgcatactctctgtcctcttccagcagagctgaggaagccctgaaaacc
ttggctgcactgaagcaggtgctggtgacccagctcatggcccatgatgatggggagcga
ctgggtcggccgctcggcgggcgtctcctcaggacaacgtctctgcgcacacccgtggag
cacagctcaggtcgttcggcctgcagggcacaggacgctgcttcaggtgacactggcttc
tacgagggctcggaggactatggtgacagttatctggtgctggagggctatggtggttct
ggagagagcagtactgatgatgatgtgcaggttggggggatggagctgggtttgtcccgc
ggctgtgctgctgactcgggcatcagcctcaggttctcttcagcctctgtagaaagcatg
tgccgcctcagccggcaggtccttacacacctgcgcgacctgcaggccaacctcaaccac
cttaaggaggtggagagcaggtattacagcatgttacggcaaaggcatgcagagtcatca
gcagacactggggagagcagagataagaaatag
DBGET
integrated database retrieval system
