Colossoma macropomum (tambaqui): 118800856
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Entry
118800856 CDS
T09004
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04142
Lysosome
cmao04144
Endocytosis
cmao05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118800856 (cltca)
04142 Lysosome
118800856 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118800856 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118800856 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmao04147
]
118800856 (cltca)
Membrane trafficking [BR:
cmao04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
118800856 (cltca)
Exosome [BR:
cmao04147
]
Exosomal proteins
Proteins found in most exosomes
118800856 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
118800856
NCBI-ProteinID:
XP_036416901
LinkDB
All DBs
Position
Unknown
AA seq
1696 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDMADPNS
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAASFAQFKMEGNSEESTLFCFAVRGQAGGKLHIIEVGTPPTG
NQPFPKKAVDVFFPPEAQNDFPVAMQISPKQDVVFLITKYGYIHLYDLETGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPDQGLQFAQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQALTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRRDPELWASV
LLETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISSELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKAADPSAYME
VVQAADQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPTDAWKESQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFF
TKVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNIALAQRL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLL
EDKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDDSLPESQV
DAIKDKVDKLETSESLRKQEEQATETQPIVYGTPQLMLTAGPSVAVPPQQAYGYGYTAPA
GYGQAPQTQPSFGYGM
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctatcagatttcaggagcacctgcagctccagaacttgggcatc
aacccggccaatattgggttcagcaccctcacgatggagtccgataaattcatctgtgtc
cgggaaaaggttggagagcaggcacaggtggtgattattgacatggctgacccaaatagc
cctattcgtcggcccatctctgcagacagcgccatcatgaatccggccagcaaagtcatt
gccctcaaagacgctgccaaaacccttcagatttttaacatcgagatgaagagtaagatg
aaggcccacactatgaccgatgatgtcaccttctggaagtggatctccctcaacacggtt
gctctagtgactgataatgccgtctaccattggagcatggagggagactcgcagccagtc
aaagtctttgatcgccactccagtctggcaggctgccaaattatcaactaccgcactgat
gccaagcagaaatggctcctccttattggcatctcagctcagcaaaacagagttgtaggg
gcgatgcagctgtactctgtcgacaggaaggtgtcgcagcccattgagggccacgctgcc
agctttgctcagttcaaaatggaaggaaactctgaagagtcaactctgttttgctttgct
gtccgtggccaggctggtggaaagcttcacatcattgaagtaggaactccgccaactggt
aatcaaccctttccaaagaaagctgtggatgtgttcttccctcctgaagctcagaacgac
ttcccagtggccatgcagatcagccccaaacaggacgttgtgttcctcatcaccaaatat
ggttacatccatctatatgatctggagacaggaacctgcatctacatgaacagaatcagc
ggggagaccatttttgttacagcacctcatgaggccacttctggaatcattggtgtcaac
aggaaaggacaggtgttgtcagtatgtgtggaggaggagaacatcattccatacatcaca
aacgtgctgcagaaccctgatctggccctgcgtatggctgtgaggaacaacctggctgga
gccgaggagctctttgcccgcaagttcaacaacctctttgctggtggcaactactctgag
gctgccaaagtggccgccaatgctccaaaggggatactgcgtactccagacaccatccgg
cggttccagagtgtgccggcccagccaggccagacctctcctctgctgcagtacttcgga
atcctgcttgaccagggacagctcaacaagtttgagtctctggagctgtgcaggcctgtc
ctgcagcagggtcgtaaacagctgttggagaaatggctcaaagaagacaagctggagtgt
tcggaggagttgggagacctggtgaaatctgtagatcccactctagcactcagtgtctac
ctgagagccaatgtccctaacaaagtcatccagtgttttgctgaaaccggacagtttcct
aagatagttctgtatgccaaaaaggtgggctacactccagactggatcttcctgctgagg
aacgtgatgcggattagtccggatcaaggcctgcagtttgcgcagatgctggtgcaggac
gaggagccactggctgacatcacacagatcgtagatgtgtttatggagtataacctgatc
cagcagtgcacatccttccttttggatgccctcaaaaacaaccgcccctcagagggtccg
ctgcagacacgtctgcttgagatgaacctcatgcatgcacctcaggttgctgatgctatc
ttgggaaatcagatgttcactaattatgaccgtgcccacatcgcccagctgtgtgagaag
gcaggactgctgcagagagctctggagcactacacagacttgtatgacatcaaacgggcc
gtcgtacacacacacctgctcaacccagagtggttagtaaacttctttggctctctgtcg
gtggaagattctctggagtgtctgagagccatgctctctgccaacatcagacagaatctc
cagatttgcgtgcaggtggcctccaagtaccacgagcagctctccacccaggccctcact
gagctcttcgagtccttcaagagctttgagggtctgttctacttccttggctccattgtg
aacttcagtcaggacccagaagtccatttcaagtacatccaggctgcctgcaagacgggc
cagatcaaggaagtggagcgcatttgcagagagagcaactgctacgaccccgagcgtgtc
aagaattttctcaaggaggcaaaactcaccgaccagctgcctctcatcattgtgtgtgat
cgctttgacttcgtccatgacctggtgctgtacctgtatcgcaacaacctccagaagtac
attgagatctatgtgcagaaggtgaaccccagtcgtctgccagtggtgattggtggtctg
ttggatgtggactgctctgaggatgtgattaaaaacctgatcctggtggtgagggggcag
ttctccacagatgagctggtggctgaggtagagaagaggaacagactgaagctgctgttg
ccctggctggaggctcgcatccatgaaggctgcgaggagcccgcaacccacaatgccctg
gccaagatctacattgacagcaacaataacccagagcgcttcctgcgggagaacccctac
tacgatagccgtgtggttggcaaatactgcgagaagagggacccccacctggcctgcgtg
gcctatgaaagaggccagtgtgaccaagagctcatccatgtgtgtaatgagaactccttg
tttaagagtctgtctcgttatctggtacgccgtcgggatcctgagctttgggccagtgtg
ctccttgaaaccaaccccttcagaaggcctctcatcgaccaggtggtgcagacggcgctg
tcggagactcaagatccagaggaggtgtcagtcacagtcaaggccttcatgacagctgac
ctgccgaatgaactcatcgaacttctggagaagattgtcttggataattctgtattcagt
gaacacaggaacctacagaacttgctgattttgacagccatcaaagcagaccgcacgcgt
gtcatggagtacattaaccgtttggacaactacgacgctcctgacattgctaacattgcc
atcagcagcgaactcttcgaggaggccttcgctattttcaggaaatttgatgtcaacacc
tcagcagtgcaggttctgattgagcacattggtaacctggaccgggcatacgagtttgca
gagcgctgcaacgaaccagctgtatggagccagctggctaaggctcagctccagaaaggc
ctagtgaaagaggccatcgactcctacatcaaggctgcagacccctctgcttacatggag
gtagtgcaggcagctgaccaaagtggtaattgggaggacttggtgaaattcctgcagatg
gctcgtaaaaaggccagagagtcatatgtggagacagagttgatctttgctctggctaaa
accaacaggctggctgagctggaagagttcattaatggccccaacaacgcccacatccag
caggtgggtgatcgctgctatgatgagaagatgtacgaggctgccaagttactctataac
aatgtgtccaactttggccgcctggcctccactctggttcaccttggagaataccaggct
gctgtggatggagctcgcaaggccaacagcacacgcacatggaaggaggtgtgctttgcc
tgtgtggatggcaaagagttcagactggctcagatgtgcggccttcacattgtagtccat
gctgatgaactggaagagctgattaactactaccaggaccgtggttactttgaggagctg
atcactatgctggaggcggcactgggactggagcgtgctcacatgggcatgttcacagaa
ctggccatactctactccaaattcaagcctcagaagatgagggagcacctggagctcttc
tggtccagggtcaacatcccaaaggtgctgcgggcagcagagcaggcccatctgtgggca
gagctagtcttcctgtacgacaagtacgaggagtatgacaatgccatcatcaccatgatg
aaccaccccacagatgcctggaaagagagccagttcaaggacataatcaccaaggtggcc
aatgtggaactgtattacaaagcaatccagttttacttggagttcaagcctttgttactg
aatgaccttctcatagtgctttcgccaagactggaccactcacgcgctgtcaacttcttc
accaaggttaagcagctcccacttgtcaaaccctacctgcgatctgtacagaaccacaac
aacaagtctgtcaacgaagcacttaacaaccttttcattacagaggaagactaccaggca
cttcggacgtctatagacgcgtatgataactttgacaacattgcactggctcagcggctg
gagaagcatgagcttattgagttcaggagaattgctgcctacctctttaaaggcaacaat
cgctggaaacagagtgtggagctctgcaagaaggacaaactctacaaggatgccatgcag
tatgcttcagagtcaaaggacacagagctggcggaggagctgctgcagtggttcttgctg
gaggacaagaaagagtgttttgctgcttgcctattcacctgctatgacctgctccgaccc
gatgtggtactggagaccgcttggaggcacaacatcatggacttctccatgccgtacttc
atccaggttatgagggagtacctcagcaaggttgacgatagtctcccagaatctcaggtt
gatgcaattaaagataaggtggacaagctggagacctctgagtctttaaggaaacaggag
gagcaggcaacagagacacagcccattgtttatggcacgccccagctgatgctgactgca
ggcccaagtgtggccgtacccccacagcaggcttatggctacggttacacagcaccagcc
ggttatggtcaggctcctcagacccagcccagctttggctacggcatgtaa
DBGET
integrated database retrieval system
