Colossoma macropomum (tambaqui): 118800898
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Entry
118800898 CDS
T09004
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118800898 (med13a)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
118800898 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
DUF3192
Motif
Other DBs
NCBI-GeneID:
118800898
NCBI-ProteinID:
XP_036416953
LinkDB
All DBs
Position
Unknown
AA seq
2152 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFYLADLTGIKWKRYVWQGPTSAPMLFPVTEEDPILSSFSRC
LKADVLSVWRRSQRQGRRELWLFWWGDDPNFSELIHSELTGEDDGVWESGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCSFSFFLHGDSNVCTSVEI
NQHQPVYHLSEEHLTLAQQASSPFQVILSPFGLNGTLTGQSFKLSDPPTQKLIEEWNQFY
PISPSSKDSSEDKMEDIDWEDDSLAAVEVLVGGVRMVYPACLVLVPQSDIPTVTPVGSSH
CTAVCSGGHQVPASNRDPAISSVTLTPPTSPEEAQTVDSHSAQKWMRLPSAVDGFSVDNT
SHHGGKIPRRMASQVVEHVWQECNINRALNKRKFSATANGTSEEEVLEKMGSWDFVESTQ
RTTCNCSRHKALKQRVGSTQGQAVSAGQVQQQPTKHKAGEKPEKGDKQQKRPQTPFHHRS
SICDDVSMETEASAGQRLSLRGQDGGRFPGLRPSDVCAVPKPPQLHTGGGTAGSVGGPSE
MVGSPQPPPLSPHPCDRGEEPSEALKNPSTPHSQHFYPPSSEPCLLPQKGPDDPRVDSLA
PPFHPAFPEAMEPTVYVGAAVSLEDDGSHVPWRFFNLPRRKDLDFPTPSLPMDKLREEAL
LAVDGNMSVTELMATSKHTLKVSEERIQTYLQQQNQHLAAAIADSDHEPEVDPYAFVDGD
VKFTFSDKKDKAGGEKEQGKKHKGEDGSAGPSDDAQRGAAHKIAASTSLIHDSDLAVSIK
DLDNLFNSDEDEQTPGARRAVNGTEEKFGSKEPKPAALDPVSCISSADLHQMFPTPPSLE
QHIMGYSPMNMGSKEYGNMEPGPGLTSLDGPSALTGQFKIEVEENFCSPKPSEIKDFSFV
YKPELCQSFVGCSMFAPLKTLPSQCLPPIKLPEECMYQPSWSLGKLELLNTVPTMSFLNR
DSNIPSVGSAMEQDYSQSYTPQTHTPFISNSAPPSNSGTGILPSPATPRFSAPTPRTPRT
PRTPRGPASVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVTLILSES
VMNLFKDCNFDSCCICVCNMNIKGADVGVYISDPNMEAQYPCSCGFSAVVNRRYGNGSGL
FLEDELDIIGRGSDVSREAEKRFEVLRSSSLEKSGGGVKDKVPDELILLLQDQCTNPYSP
LLATEPEGTASRVPGGVVVPPCVRVEERDFHNDCYLALEHGRQFMDNMSGGKVDETLVKS
TCLHHWAKRNAVDVSALCSQDVLRVLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKM
AGRGSYGTDESPEPLPIPTFLVAYEYDFVVLSPFGLPYWEKLLLEPFGSQRDVGYLVLCP
ENEALLNGAKSFFRELTAVYESCKLGQHRPISKVHADGIVRVGGAAAKKLSEQPISDWFL
KGVSGTSEAFAKLKLFAQVCRHDLAPYLATQPLDGSLLTQPSPPPSSTQSSSVQSSGLAS
SNPQTSQASGGSSLTNNTGPGNSGPGLPGSTSSTPSSGPQNSSMQPSKPSSFPPFGGMGA
QSNSSQSGALGQQAGTQNSNLSGDSSSSTSQTQGPSEPPESTMEREKVGIPTDGESHAIT
YPPAIMIYIVDPFSYEDADSSVWTLGLLRCYLEMVEFLPSHIRNSISVEIIPCQYLLQPV
KCEERQLYAQHLKSLAFSVYSQCRRPLPVSTNVKSLTGFGPGLALDTALRSPERPECLRM
YTPPFILAPVKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTDMNGELLETCI
ISVDVPNRARRKKGSARRLGLQKLWEWCLGLVQMTSVPWRVVIGRLGRIGHGELRDWSIL
LSRRNLQSLSRRLKDMCRMCGISSADTPSILSACLVAMEPQGSFIIMPDSVSTGSVFGRS
TTLNMQTSQLSTPQDTSCTHILVFPTSAFVQVNSSSYTPEDIAFNPINDGSDPIGGIFDL
LEQENDLVDPDIINILPASPTTSPVHSPGSQYHHGGDGSKGQSTDRMESHDEAPNILQQP
LALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVSSVQSDELLHGKHSHPLD
SNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQLYNFIMNML
NT seq
6459 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttttgtaccaaacggggccagcttggaggattgccattccaatctattc
tatctggctgacctgacgggaatcaaatggaagcgatatgtgtggcagggtcccacctca
gctcctatgctgttccctgtgacggaggaggatcccatccttagcagcttcagccgctgt
ctaaaggcagacgtgctgagcgtgtggagacggagccagcggcagggccgcagggagctg
tggctgttctggtggggtgacgatccaaacttctctgagctcatccactctgagctcaca
ggtgaggatgatggtgtgtgggagagtggcctgtcatatgagtgtcgtacgctgctcttc
aaagccatccacaacctgctggaacggtgcctcatgaaccgcagctttgtgcgcattgga
aagtggtttgtcaagccctatgagaaggatgagaagcccattaacaaaagcgagcacctt
tcctgctccttcagcttctttctacatggagacagcaatgtgtgtaccagtgtggagatc
aaccagcatcagcccgtgtaccacctgagtgaggagcacctgacattggcccagcaagcg
tccagccccttccaagtgattctgagtccctttggtctgaacgggacactgacggggcag
tcctttaagctgtcagacccgcccacgcagaagctcattgaggaatggaaccagttctac
ccaatcagccccagctccaaggatagttcagaggacaagatggaggacattgactgggaa
gatgactctctggctgctgtggaggtgctcgttggtggtgtgcgcatggtgtatcctgcc
tgcctggtcttggtcccgcagtcagatattcccacagtaacacctgttgggtcctcacat
tgcactgctgtctgttcgggtggccaccaagtgcctgcttcaaacagagaccctgccatc
tcctctgtcacacttacccctcccacctcaccagaggaggcccagacagtcgactctcat
tctgcacagaagtggatgcggttgccatcagcagttgatggcttcagtgtagacaacacg
agtcaccatggaggcaagattccacgcaggatggccagccaggtggtggagcacgtctgg
caggagtgcaacatcaatcgagcgctgaacaaacgcaagttctctgccacagccaatggg
accagtgaagaggaggtgctggagaaaatgggctcctgggattttgttgaatcaacacag
agaacaacttgcaactgctcaaggcacaaagccctgaagcagcgagtgggcagtacacag
ggccaggctgtttcagctgggcaggtgcagcagcagcccaccaagcacaaagcaggagag
aagcctgaaaagggtgacaaacagcagaagcgtccacaaacgccctttcaccaccggagc
tccatctgcgacgatgtctcaatggaaacagaagcctcggcaggacagcggttgtctctc
cgaggtcaggacgggggcagattccctggcctccgcccttccgatgtctgcgctgtgccg
aaaccacctcagctgcacacagggggtggaacagcaggcagtgttggtggcccatcagaa
atggtgggctcccctcagccacctccgctcagccctcacccctgtgatcggggagaggaa
ccttccgaagccctaaagaatccctccacacctcacagccaacacttctaccctccttct
tcagaaccttgcctcctgccccagaagggcccagatgatcctcgtgttgattctctcgct
cctcccttccatccagcttttcctgaagccatggagcccacagtgtatgttggggcagca
gtaagcctggaggatgatggaagtcatgtgccctggagattcttcaaccttccacgcagg
aaagacttggatttccctacaccctctctacctatggacaaactgagagaagaggccttg
ctggcagttgacggaaatatgtcagttactgagttaatggccacctccaagcatactctg
aaagtgtcagaggagcgcatccagacctacctgcagcagcaaaaccagcatctagctgca
gccatcgcagacagtgaccacgagcccgaggtggacccctatgcctttgtagatggggat
gtgaagttcaccttctcagataagaaagataaagcaggcggggagaaagagcaaggaaag
aaacacaagggggaggatggaagcgctggtccatcagatgatgctcagcggggagcagcc
cacaaaatcgctgcctccaccagtctgatccatgactctgacctggctgtttctatcaaa
gacctggacaacctcttcaattcagatgaagatgagcaaacgcctggtgccaggagagca
gtgaatggaacggaggagaagtttggcagtaaggaaccgaagccagccgccctggaccct
gtgtcatgtattagttcagcagacctgcaccagatgttccctacccctccatctctggag
cagcacataatgggctactcaccaatgaacatgggcagtaaggagtatggtaacatggag
cccgggcccggcctcacctctttggatggcccatctgctttgacaggccagtttaagatt
gaggtggaggagaacttttgcagtccaaaaccatcagagatcaaggatttctcctttgtg
tataagcccgagttgtgtcagtcttttgtgggctgctcaatgtttgcccctttgaaaacg
ctacccagtcagtgtctgcctcccattaagctaccagaggagtgtatgtaccagcccagc
tggtccctgggcaagctggagcttctcaacaccgtacctaccatgagcttcctgaacagg
gacagtaacatccctagtgtgggcagcgccatggaacaggactatagccagtcatacacc
cctcagacacacacaccctttatatccaacagcgcgccacccagcaacagtggcacaggg
atcctcccctcccctgccactccacgtttctccgccccaaccccccggacgcctcgtacc
ccccgcaccccgcgtggccctgccagcgtccagggctccctcaagtatgagaactcggac
ctatattcgcccgcctccacaccctccacctgtcggccactcaactctgtggagccggcc
accgtgccttccatcccggaggcccacagtctctacgtcacccttatcctgtctgagtcg
gtcatgaacctgttcaaagactgcaactttgacagctgctgcatttgcgtatgcaacatg
aacatcaagggtgccgacgtgggtgtgtacatcagcgaccccaacatggaggcacagtac
ccgtgcagctgcggcttcagtgccgtcgtcaaccgccgctatggcaatgggtcgggcctc
ttcctggaggatgagctggacatcatcggccgtggctcggacgtgagcagggaagcagag
aagcgctttgaggtgctgagaagttcctcattggaaaagagcggaggaggagtgaaggac
aaagttccagatgagctgatcttgcttctgcaggatcagtgcaccaacccttactcaccg
cttttggccacagagccagaaggaaccgcctccagggtgccagggggtgtagtcgtccct
ccctgtgtgcgcgtagaggagagggacttccacaacgactgctacctagccctggaacac
ggacgacaattcatggacaacatgtcaggaggcaaagtggatgagacactagttaaaagc
acctgcctgcaccactgggccaaacgtaatgcagtggatgtgagtgctctgtgctcacag
gatgtgttaagagtgctcctgtccctccagcctgtgcttcaggatgccatccagaagaaa
agaactgtgcgctcatggggcgtccaaggaccccttacctggcagcagtttcacaagatg
gctggaagggggtcctatggcacagatgagtccccagagcctttgcccattcctacgttc
ctggtggcttatgagtatgactttgtggtgctgtctccctttggtctgccctactgggag
aagctactgttggaacctttcggctcccagagagatgtgggctatctggtgctctgccca
gagaacgaagcactactcaatggagccaagagttttttcagggagctaacggctgtctat
gagtcttgcaagctcggtcagcatcgaccaatttccaaagtgcatgctgatggaattgtg
agggtgggaggggctgcagccaagaagctatcagagcaaccaatttctgattggttcctg
aagggagtcagcggcaccagtgaagcctttgccaagcttaagttgtttgctcaagtctgc
aggcatgacctcgctccatacctcgctacacagccattggacggttccttacttactcag
ccaagtccacctccttcctccacccagtcatcatctgtgcagtcctcaggcttagcctct
tctaacccccaaacttcacaggcctctgggggctcctctctcaccaataacactggcccg
ggcaacagtggcccagggttaccaggcagtaccagtagcactccttcttcaggccctcag
aacagcagcatgcagcctagcaagccaagctccttccctccctttgggggaatgggagcc
cagagcaacagctcacaatctggggctctgggccaacaggctggcacccagaactcaaac
ctctccggagatagctcatccagcaccagccagactcaggggccttctgaaccacccgag
agcaccatggagagggagaaggttggcatacccactgatggggagtctcatgccatcaca
tacccccctgctattatgatctacattgttgacccgttctcatatgaggatgcggactca
agtgtgtggacacttgggctcctgcgctgctacctggagatggtggagttcctcccttct
cacatacgcaactctatctctgtggagataatcccatgtcagtacctcctgcagccagtc
aagtgtgaggagaggcagctgtatgcgcagcacctgaaatctctggccttctcagtgtac
tctcagtgcagacggcctctccctgtgtctaccaacgtcaaatcgctaacgggctttggt
cccggcctcgcacttgacacagccctcaggagtccagagaggccagaatgtttgcgtatg
tacacacctcctttcatcttggcaccagtgaaggacaagcagacggagttgggagagacg
tttggagaggcatcgcaaaaatacaatgtgctatttgtgggatactgcctgtcacatgat
cagaggtggctactggccacctgtacggacatgaacggagagctgctagagacttgcatc
ataagcgtagatgttcccaacagagcgagaaggaaaaagggctcagctcgacggctcggt
ctgcagaagctctgggagtggtgcttgggtttggtacagatgacatcagtgccatggagg
gttgtgattggccgacttgggcggataggtcatggagagttacgagactggagcatacta
ttgagcaggaggaatctgcagtcgctaagccgccggctgaaggacatgtgcagaatgtgc
ggtatctcatctgctgacactcccagcatccttagcgcctgcttggttgccatggagcct
caaggctcgtttatcatcatgccagactctgtgtcaactggttccgtgtttggccgcagc
acgactctgaatatgcagacatcacagctcagcacccctcaggacacctcctgcacccac
atcctagtgttccccacatccgcctttgtccaggtcaacagctccagctacacccctgag
gacattgcctttaaccccatcaatgatggatcagatcctattggaggcatctttgacctt
ctggaacaggagaatgacctggttgacccagacatcatcaatatccttcctgcctccccc
accacctcccctgtccactctccaggatcacaatatcaccacggaggagatgggagcaag
ggtcagagtaccgataggatggagtctcatgatgaagctcccaacatcttgcagcagcct
ctcgctcttggctactttgtgtccacggctaaagcaggcccactgcccgactggttctgg
tcagcctgcccgcaagctcagaaccagtgccctcttttcttaaaggcctctctacacctt
cacgtatcttcagtgcagtcagatgagctgttgcatggcaaacactctcacccactggac
tctaatcagacctcagatgtgctcagatttgtgttggagcagtacaacgccctctcctgg
ctgacttgtgaccctgcaacccaggaccggcgctcatgtctgcccattcactttgtggtg
ctcaaccagctctacaatttcataatgaacatgttgtaa
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integrated database retrieval system
