KEGG   Colossoma macropomum (tambaqui): 118801011
Entry
118801011         CDS       T09004                                 
Name
(RefSeq) nuclear factor 7, brain-like
  KO
K12012  tripartite motif-containing protein 35
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmao04121]
    118801011
Ubiquitin system [BR:cmao04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    118801011
SSDB
Motif
Pfam: PRY zf-B_box zf-RING_UBOX SPRY zf-C3HC4_3 U-box zf-C3HC4 zf-C3HC4_4 zf-C3HC4_2 zf-RING_5 zf-RING_2 zf-RING_10 Prok-RING_4 zf-Nse DUF4200 Baculo_PEP_C zf-RING_6 End3 zf-ANAPC11 Tweety Perilipin AAA_11 Med21 Exonuc_VII_L Fib_alpha NPA
Other DBs
NCBI-GeneID: 118801011
NCBI-ProteinID: XP_036417079
LinkDB
Position
Unknown
AA seq 469 aa
MAARNPLSEEDFSCPVCCEIFRDPVILSCSHSVCKTCVQQFWETKGSQECPVCRRRSSKE
EPPFNLALRNLCESFLESRSQRSSAGSEVLCILHNEKLKLFCLDDQQPVCVVCQTSKKHK
NHEFSPIDEALTDFKNKLKSALEPLQKNLKVLEEAKQDYDQTAAHIKTQAQHTERQIKEE
FEKLHQFLRDEEAAKIAALKEEEEQKSQMMRRKIEEMNGEISSLSDTIRNIEKEMEADDV
LFLQNFKSTEKQAQLKPKDPEKTSGALINVVKHLSNLQFRVWENMQEILQYTPVTLDPNT
AHPDLHLSDDLTAVEYRNQRSSLPDNPERFDVYACVLGSEGFNSGTHCWDVQVGDCGSWS
LGVITESGTRKGNTFWNSVWSLESDDQYYIRRPGQSDLSLRPKAKLQRVRVQLDWDRGKI
TFTDLLTNTHLHTVKHTFTERVLPFLYNSSGDPLRILPVKTSVTVEQHS
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggctgctagaaaccctctttcagaagaagacttttcgtgtcctgtgtgctgtgaaatc
ttcagggatcctgttattctgtcgtgcagccacagtgtgtgtaaaacctgtgtgcagcag
ttctgggaaactaaggggtctcaagaatgtccagtctgtagaagaagatcctctaaagaa
gaacctccctttaaccttgcactgaggaacctctgtgagtcttttctagagagcaggagt
cagagatcttcagcagggtctgaggtgctctgcattctgcacaatgagaaactcaaactc
ttctgtctggatgatcagcagcctgtgtgtgtggtgtgtcagacttcaaagaaacacaaa
aatcatgaattttccccaatagatgaagctctgactgactttaagaataaactcaagtct
gctttggagcctctacagaagaatctgaaagtcttagaggaagctaaacaagactatgac
caaacagcagctcacattaagacgcaggcccagcacacagagaggcagataaaggaggag
tttgagaagcttcaccagtttctaagagatgaagaagcagcaaaaatagctgcactgaag
gaggaggaggagcagaagagtcagatgatgaggaggaagattgaggagatgaatggagaa
atatcatctctttcagacacaatcagaaacatagagaaggaaatggaagctgatgatgtt
ctgttcttacagaacttcaagtctacagagaaacaagctcagctcaaaccaaaggatcca
gagaagacatcaggagctctgatcaatgtagtgaaacacctttccaacctgcagttcaga
gtgtgggagaacatgcaggagattctccagtacacccctgttactctggaccccaacact
gcacatccagacctccacctgtctgatgatctcactgctgtagaatacaggaaccagaga
tcatcacttcctgataatccagagagatttgatgtgtatgcttgtgttctgggttctgag
ggttttaactcagggacacactgctgggacgtccaggttggagactgtggttcctggtct
ctgggtgtgataacagagtctggaacaagaaaaggaaacactttctggaattcagtgtgg
agtctggaaagtgatgatcaatactatattcgccgccctggacagtcagatctctccctt
agacctaaagcgaagctgcagagggtcagagtgcagctggactgggacaggggaaaaata
accttcactgatcttctaaccaacacacacctgcacactgtaaaacacactttcactgag
agagttttaccgtttttatataattcttctggtgatcctctgaggatcttaccagtgaag
acgtcagtaacagtggaacagcacagttaa

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