KEGG   Colossoma macropomum (tambaqui): 118801254
Entry
118801254         CDS       T09004                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03410  Base excision repair
cmao04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118801254 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    118801254 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmao03400]
    118801254 (parp4)
DNA repair and recombination proteins [BR:cmao03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     118801254 (parp4)
SSDB
Motif
Pfam: VIT PARP VWA_3 VIT_2 VWA BRCT_2 BRCT VWA_2 PTCB-BRCT VWA_CoxE
Other DBs
NCBI-GeneID: 118801254
NCBI-ProteinID: XP_036417393
LinkDB
Position
Unknown
AA seq 1838 aa
MAVFQGCSVVLDLRKVPYKEKKKLTSAIVDNGGSISYVVNQKCSFVVTRSLEDLSSNRQR
SAQKYQIPVVGVQFVWSCLEKGVLLPVSEHTVNQQSSDLTQQPLSYPAGLKSRDQPQLQS
SDIHRENAEIRAKKGTYLGKLRLYKGSDDDIPEFPSHFQVAKYSIFYKAEVMTWSVVELQ
SAKGEAGQQYRVVKSVMNEAEKTVLQDKQAHSFSSEEAVDVYLMWKDELIARGDSEKRTL
PPAAQRMASHGLQQLLLEEKLNCSTVSQEVGTFVELIWTEALGSLRSILTVPVGSISLND
VSRVEGLLLQVQKCQCEDEVKALLEEVNTLLPLRMMEPDSKQKLVSQKLDLCQLIRDILN
MSEATLGNPFPSSLGKYRVLRCSIEQVPSQSPEFQSVCQLLQDRSVQIQQILRVSRETEV
LMFREELGNIKPLLHSSHPRSFAGILSRGLLLPRVGVEQHGIERTDVGNLGGGIYFSDSL
STSVKYSKPSVTDGSRLLLVCDVALGQCKDLHRRDTSLNCAPEGYNSVHGVRRNQSTHSD
FEDDEYVVYNTDQVRLKYVVQYSLKEDQLKTFQPYINTSVELTHSRRTSDLCELSDSDDS
GGLEMTKNPLEEVTAGLLDSSGQTLPLQAVHVRCKLMDLLSQVIIFQTYTNQSAVPIEAK
YVFPLEETAVVCGFEAFINGKHVIGKVKEKEQARKEYRQAIEKGHGAYLMDQDAPDVFTI
SVGNLPPGATVLIKVTFITELVVRAGSILFSLPGSVAPWQQSAALNQRTQTSVEKVCVNE
LEPAGEFSLCMSIEMPYEVLDLECSHRIKIKRTDCKAVVSTLPDQTLSTDGFQLSFTLSQ
IHMPRMWVEKHPEKESEACMLVFYPDFEPSGVSASGVSDVVILLDTSESMLGEAMLNARR
IALKVFQSLDRSLQVNIISFGTDYKEAFPTPNVLEDGEVFKLAKNFIMSSPAVGGSTELW
RPLRSLNLLPPSHGVRDVLLISDGHIQNQPQTLQLVRENARHTRLFTCGLSPTANRHMLR
ALAQAGGGAYEFFDTKTKHTWAEKVNSQVKCMASPGCSSVAVKWQQFNPTAPPPVQAPSQ
LHALFSDCHTLVYGFVPHCTQATLFGDLSGQELKTVVSTTELQKTKGTFLHKLTARAIIR
DYEDGSLGSSEAEHEGKKAELKSYIIELSKEFSILSQFTSFVAIEERDQQQPDSGITDVP
KLIAEEDVDILPYMGWTEEEQICLGDVESFNYECLETDLTGYDFFDDLQSSYVDCSLSLD
DHSPIQKTAAATFESPLEGAFVGEELQPDTWSAGAMFYGARRNSKKKKKKQLFSETYKGY
GAAHPIEALASSQSPANFLMPESHSHRFGSSAFICLSASIESDIPIGPFTQTDPDVSIAS
FEDGCPLPRTPPDAVDLALDEAPIRSSEPYTETPFEGVAHHAASAACRPVPPLRSGAALF
SIPNTALFLPPPTASPGFGTQLHASSFTTYSALPPLSSFAGVLPPSPPPRLPSACAPPPP
PPGFVPQPGASSFTTYSALPPLSSFAGCPPPPPRPSPHPPPAPPPPPPPLLDAFFLSADD
AAPPASPPPLGTVVPDSHQSPLPQFHFAAQHSRDSHESLVPCALESAVSPKRGRHRRVAL
AKASSGVDFGFRSGSPRIKCSFSSWKVGNLEKAFGPVSVERPEDDLLEMDSIGEQYRRPD
RINWEEIFDLQHQDGYWECTGRLSRFLGLDVDFFANVFLKEKGICSLGVKAHADILRLVA
TLLVLQLMRVMKMTEVELFQSLFRLTDSPEPRPACYEAVKKAVDWVCWADRQYPCVCSRL
EFGWDWESCTRQLLGLDSLHPCSPLTSVLQRSAQISVM
NT seq 5517 nt   +upstreamnt  +downstreamnt
atggctgtgtttcagggctgctctgtggttctggacctgaggaaagtaccctacaaggag
aagaagaaactgacgtctgctatagtagacaatggaggaagcatatcatatgtagtcaac
cagaagtgctcctttgtggtgaccagaagcctggaggacctgagcagcaacaggcagaga
agtgctcagaagtaccagatccctgtagttggggtgcagtttgtgtggagctgtctggag
aaaggtgtcctcctgcctgtgagcgagcacactgtaaatcagcagtcgtctgatctcact
cagcagcctctttcatacccagcagggctgaagtccagagatcaaccacaactccagagc
agtgatattcacagagagaatgctgagattcgtgcgaagaaaggcacgtacctgggcaaa
ctgagattatacaagggaagtgatgatgatataccagaatttccttcacatttccaagtg
gcaaagtactccattttttacaaggctgaagtcatgacctggtcagttgtggagcttcag
agtgccaaaggtgaagcaggacagcagtatcgtgttgtgaaatctgtcatgaatgaggca
gagaaaactgtactacaggataagcaggcgcacagtttcagctctgaggaagctgtggac
gtctatctgatgtggaaggatgaactcattgcaagaggtgactcagagaaacgcacactt
ccaccagcagcccagaggatggcctcccatggcctgcaacagctgttgttggaggagaag
ctgaactgcagtacagtctcacaggaagtaggcacctttgtggaactgatctggacagaa
gccctcgggtcactcagaagcatcctgaccgttcctgtcggcagcatcagtctgaatgat
gtgagcagggtggagggtttgttgctgcaggtacagaagtgtcagtgtgaggatgaggtg
aaggctctgctggaggaggtcaatactctgttacctctcagaatgatggagcctgactcg
aaacaaaagcttgtgtctcagaaactagacctctgtcagctgattcgagatattctgaat
atgagtgaggcaactctgggaaacccctttccatcctctctggggaagtacagagtcctg
agatgcagtattgaacaagtgccatcgcaaagcccagagtttcagtcagtctgccagctc
ttacaggatagatcagtccagatccagcagatactgcgtgtgagcagagagactgaagtt
ctcatgtttagggaggagctaggcaatattaagcccctcctccattcgtctcatcccagg
agctttgcaggaatcttgtctcgaggtctgttgctgcccagagttggagtagaacagcat
gggattgaaagaacagatgttgggaatctaggaggtggcatctacttcagtgactctctg
agcacttcagtcaaatactccaagcccagtgtgacggatggctctcggctgctgctggtg
tgtgacgtggctctgggtcagtgtaaggacctgcacaggagggacacttctctgaactgc
gctcctgagggctacaacagtgtgcacggagttcgccgtaaccaatcaacacactctgat
tttgaggatgatgaatatgtggtgtacaacacagatcaggtcaggctgaaatatgtagtt
cagtactctctgaaggaggatcagctgaagacctttcagccttacattaacacatctgta
gagctcacacactctcgcagaacctctgacctctgtgagttgtctgacagtgatgacagt
gggggtttggagatgactaagaaccctctggaggaggtcacagctggtttgttggacagc
agtggtcagacactccccctgcaggcagtgcatgtgaggtgtaagctgatggacctgctg
tctcaggtcatcattttccagacatatacaaaccagagtgctgttcctatagaggcaaag
tatgtctttccattagaagagacagctgtggtgtgtgggtttgaagccttcattaatgga
aagcatgttatcggaaaggttaaggagaaggagcaggcacgtaaagaatacaggcaggct
atagagaaaggccatggagcctacctgatggaccaggatgcgcctgatgtgttcaccatc
agtgtggggaatctgccccctggagccacagtgctgatcaaagtgaccttcatcactgag
ctggttgtgagagcaggcagcatcctcttctctctgccaggcagtgtggctccatggcag
caaagcgccgctctcaaccagagaacccagacgtccgttgagaaggtgtgtgtgaacgag
cttgaaccagcaggagagttttctctgtgtatgtccattgagatgccttatgaggtcctt
gacctggagtgttctcatcgcatcaaaataaagaggacagactgtaaggctgtagtcagc
acgttaccagatcagactctaagcactgatggcttccagctcagctttactttgtctcag
atccatatgcccaggatgtgggtggagaaacatccagaaaaagagagtgaggcctgcatg
ttggtattttatccagactttgagcccagtggggtttctgcctctggtgtgagtgatgtg
gtcattctgctggacacgtctgagtccatgctaggagaggccatgctgaatgcacgcaga
attgctttaaaggtttttcagtcactggatcgttcactgcaggtcaacatcatctctttt
gggactgactacaaagaggccttccctacaccaaatgtgctagaggacggtgaagttttt
aaattagccaagaacttcattatgtcctctcctgctgttggtggtagcactgagctgtgg
aggcctctgcgcagcctgaatctgctgcctccatctcatggtgtgagggacgtgctgctg
atctctgatggacacatacagaaccaacctcagaccctgcagctggtgcgagagaacgcc
cgccatactcgcctcttcacctgtggcctcagcccaacagctaatcggcacatgctgaga
gctttggctcaggcaggtggaggagcatatgagttttttgacacaaagacaaagcatacc
tgggctgagaaggtgaattcccaggtgaagtgcatggcatctccaggctgtagttcagtg
gcagtgaaatggcagcagttcaatcccacagcaccacctcctgttcaagccccctctcag
ctacacgctctcttcagtgactgtcacactctggtctacggctttgtgccgcactgcact
caggctacactttttggtgacctgagtggacaggaacttaagacagtggtttccactacc
gaattacagaagactaaaggaacattccttcacaaactaacagcaagagcgatcatcaga
gactatgaggatggcagtcttggctctagtgaagcagaacatgaaggaaagaaagctgag
ttgaagtcctacatcatcgagcttagtaaagagttctccatcctgtctcagttcaccagc
tttgtcgccattgaagaaagggaccagcaacagcctgattctggaatcactgatgtccca
aagttaattgcagaagaggatgtggatattctgccgtacatgggctggactgaagaggag
cagatatgtttgggggatgtggagtcttttaattatgaatgcttggagactgatttaacc
ggatatgacttttttgatgatctccaaagttcatatgtcgattgctccttgtctttggat
gatcacagtcctatccagaagacagcggctgctacttttgagtcaccattagaaggcgca
tttgttggtgaagagcttcagcctgatacttggtcagctggtgcgatgttttatggtgct
aggaggaattcaaagaagaagaagaagaaacaattattctccgaaacatataaaggctat
ggagctgctcatcccatagaagctttagcatctagtcaatcccctgcaaacttcctcatg
cctgagtctcattctcatcgttttggttcttctgcttttatttgtctttctgcctccata
gagagtgacattcccattggtccatttactcagactgacccagatgtatccatcgcatct
tttgaagatggctgtcctctgccaagaacaccacctgatgctgttgacttagcattagac
gaggcccccatccgctcttctgagccttacactgaaactccttttgaaggtgttgctcac
catgctgcttccgcagcatgtagaccggttcctcctcttcgttctggtgctgctcttttc
tccattcctaatactgctctttttctccctcccccaactgcttctcctggttttggcact
caactccatgcttcttccttcactacctattctgctttgcctcccctttcttcttttgct
ggtgttcttcctccttctcctcctcctcgtcttccttctgcttgtgctcctccgcctcct
cctcctggttttgttcctcaacccggtgcttcttccttcactacctattctgctttgcct
cccctttcctcttttgctggttgtcctcctcctcctcctcgtcctagtcctcatcctcct
cctgctcctcctcctcctcctcctcctcttcttgacgcttttttcttaagtgctgatgat
gctgccccacccgcttctcctccgcccctaggaacagttgtacctgacagccatcagtcc
cctcttcctcagtttcattttgctgctcagcattcccgtgattcccatgagtcccttgtt
ccttgtgcccttgaatcagcagtttctccaaaacgtggtcggcaccgtcgtgtggcgtta
gctaaagcgtcctctggtgttgattttggatttcgttcgggctcccccaggattaaatgt
agtttttcctcatggaaagttggtaatttagaaaaggcgtttggcccagtttctgtagag
aggcctgaggatgacctactggagatggatagtatcggtgaacaatacagacgacccgac
agaatcaactgggaggagatatttgaccttcagcatcaggatggctactgggaatgtaca
ggaagattgagtaggttcctgggtctggatgtggacttctttgccaacgtcttcctgaaa
gagaaaggcatctgctctttgggggtgaaggctcatgctgatatcctgaggctggtggct
acactgctggtgttgcagctgatgcgtgtgatgaagatgacagaagttgagctgttccag
tctctcttccgcctcactgactctcctgagcccaggccagcatgctatgaagcagtgaag
aaggcagtggactgggtctgctgggcagacagacagtacccatgtgtgtgcagcagactg
gagtttggctgggactgggagtcctgcacacgccagctgctgggtctggactcactgcac
ccctgctcccctctgacctctgtcctgcagaggagcgcacaaatatctgtcatgtag

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