Colossoma macropomum (tambaqui): 118801376
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Entry
118801376 CDS
T09004
Symbol
carmil2
Name
(RefSeq) LOW QUALITY PROTEIN: capping protein, Arp2/3 and myosin-I linker protein 2
KO
K20493
leucine-rich repeat-containing protein 16
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118801376 (carmil2)
Membrane trafficking [BR:
cmao04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
118801376 (carmil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
DUF7650
Motif
Other DBs
NCBI-GeneID:
118801376
NCBI-ProteinID:
XP_036417554
LinkDB
All DBs
Position
Unknown
AA seq
1683 aa
AA seq
DB search
MASQAEVPFCLKDAIIQLLRPQKVQFMRLVQLNQSRDRSEGRVLVMTQWRAHMFQSKQPV
KVESSFSYLEIYAIIIESLEQVIIETDRQIYSLSLISMGDLEAVVSHVTTSLKKIFPDSS
PGKLLKKIPPELQDRLWSLSSRVEEQLNGAHGPCGGFSDTYAALCDFNEFQCREEVQWDV
DNIYHVQNCQEFNLVDFSYLESRDLALAVGALSFNQWFTKICSKDFKLTLDVQEQVIYLI
NRSTALQELCLEAGGLKADFVVKMACALQDQTASVLHVINLSANSIEDKGVMSLSQSLAR
LPHGFSQLYLSKVSLSPKGLGSIANMLYQTKCLSNSLTHLDLSGNTGCLATEDAMNLFRF
LSAQNIVSHLDLSSTDCPLDALFVSLSTGCYTTLSYLSLSRNPFSHRKVREVTRSVRDFF
TKSMKLKYVGLAGTKLPPEALRLLLQGLATNSYLSELELDISSCELRSSGAQVIQEHIFE
TKAIGSLDLSDNGFENDMVTLVLSIGRSHSIRHLALGRNFAMKSRALTDVLHRIVQLIQE
EECPLESLSVSDSKLKTGTTILINSLGSNSGLSKIDISGNCIGDTGAKMLAKALMINTKL
KTLIWDRNSVSAAGFMDVANALERNTTLQHMSIPMSDMAQSYRSNPEKTEEAMQKIQTCL
RRNSQRICTTPDEMLNLQQGLKTSRSEQLVQHICQKLQETMRPLSCYNIQEVQSDILSAE
EALQHARIAITSLPRLFELGRSPPAGSTVQHILDDAARAITSELTEEIQEQAQMMLQFAQ
AVCPRVVQRSSVSEQLANRVANKTRQATHFIHSTVQQVENSIREKLSELKVSVSVSLVES
IIEEVLQDLSVAQQKLDKHLKEYSQPFSSKTNVPQLRVVENEFPTDEYVPVMFRNSFCTR
SIRPAPSVKSLLEGEGEQQARASAHSQQEVEERERARARERERGGGGAQGSRLTAEERGR
SLSFSSSLVTSLSVTTAVGGARTLGPARPGMGAEPAGSGCGAAAGSNSTEPRRPEPASTQ
PPMDLPIEGQTLRHYTRTRPRPNRRNRQPPSKPQEQAAESENEANENMGRVDEGVEEFFT
KKIIPDDPLKHQREEPLNKAQPAESTCVTTTPPTTTTTTTPTPSTAPSKNIKKKFGDFFA
FKKVRAGRGAKGEGAPEGKVKKTSIADLIRPLREAARAEKEREKEREREKEREREKEREK
EKEKAEEDSIVKAPTTTPTPTITDSALTVPAVDDKMAPRAPSPLLMPILAPSAASASTPT
PPASSPAKTEEAPALSPAAPTSPTKTPSPVAAMSPSEREKSRTLEKSRTPDGERRPKPTR
RSLREGKSQSLILLTGLEPEHDAAAIQAKKHASESSSSFEQRIHGLLHRIGVTKTPPCDS
KTSQSKDEELRKANSEGAILDSKPEPPPTYMKPRTMSTSSDTRRPVRGGNVEPLRADRPP
LPERPIGPLPPKPALKPTLIPPSETPTASRTITAAPRQPSPSPDAQPLAVEAAPTTQAQP
KEPPTPSPRKETPPAPSPRRVLSTDIRERAERAQSVTEETLPKPRPRMKPSPQRRAVSVH
EDALLQHAALLDPEELKAALPRLQRSPVRKRVNLGELEPCSEDLPEGEEAKTEGRGDGSG
QAGGTDSTTVSKSPPEASVAGSGEEESRQEQREMVSEQDQQHTAQGETSDQRTETSSPET
NMD
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacaggcagaggttcctttctgtctgaaagatgccattattcagctgttgagg
ccccaaaaggtccagtttatgaggcttgtgcaacttaaccagtccagggaccggtcagaa
ggcagagttctagtcatgacccagtggagggctcacatgttccagagcaagcagccagtg
aaggtggagagttccttcagctatctggagatttacgccatcatcattgagagtcttgag
caggtgattattgaaacggacaggcagatttattctctcagcctgatatcgatgggagac
ctggaggccgtggtcagtcatgtgaccacctcgctcaagaaaattttccccgattcgtcc
ccagggaagctcttgaagaagattcctcctgagcttcaggacagattgtggtctctgagc
tccagagttgaggagcagctgaatggagctcatgggccgtgcgggggtttctccgacacc
tatgctgcactgtgtgatttcaacgagttccagtgtcgcgaggaagtccagtgggatgtg
gacaatatttaccatgtacagaattgtcaggaattcaaccttgtagacttcagttattta
gaaagccgagatttggcgttggctgtaggtgctctttccttcaaccagtggttcaccaag
atctgcagcaaggacttcaaattgacactagatgtgcaggagcaggtgatctacctcatt
aacaggtctacagctctacaggagttgtgcttggaggcaggcggactcaaagcggacttt
gttgtaaagatggcctgtgctctgcaagaccagactgcctccgtgctccatgtcatcaac
ttgtctgccaactccatagaagacaaaggtgtaatgtcactcagtcagagtttggcgcga
ctgccccatggtttcagtcagctttatctctccaaagtctctctgtctcctaaaggactg
ggcagtatagcgaatatgctctatcagaccaaatgtctctccaactcactgacccacctg
gacctgagtggaaacacagggtgtttggctacagaggatgccatgaatctcttcaggttc
ctgtctgcccaaaacattgtgtcccatctggacctcagctccactgattgtcctctggat
gccctctttgtgtctctctctactggctgttacactactctgtcctacctcagcctctcc
agaaaccccttctcacataggaaggtgcgggaggtgacacgcagtgtgagagacttcttc
actaagagcatgaagctgaagtatgttgggctggccggcactaaactacctccagaagcc
ctcaggttactactccagggtctggccaccaacagttatctctctgagctggagctggac
ataagcagctgtgagctgaggtccagcggagctcaggtaattcaggagcacatctttgag
accaaggccatcggcagcctagatctgtctgacaacggctttgagaatgacatggtgact
cttgtgctctctattggccggagtcactctatacgacacctggccctcggccgcaacttt
gccatgaagtctagagctctgactgatgttctgcacagaattgtacagctcattcaggag
gaggagtgtcctttggagtctttgtctgtgagcgactctaaactgaagacaggcaccacc
atcctcattaacagcctgggtagtaactccggcctctccaagatcgacatcagcggcaac
tgcatcggagacacaggcgccaagatgctagccaaggctctgatgatcaacaccaaactc
aaaacactgatctgggacagaaacagcgtttctgctgcaggttttatggatgtggccaat
gcactggagaggaacaccacactacagcacatgtccattccaatgagtgatatggctcag
tcttaccgctccaacccagagaaaaccgaggaggcaatgcagaagattcagacatgctta
cggaggaacagtcaaaggatatgcactacacctgatgaaatgctgaacctgcagcagggt
ctgaagaccagccgctcggaacagcttgtgcagcacatctgtcagaaacttcaggagacc
atgaggcctctttcctgctacaacatccaggaagttcagagtgacatactgtctgcagaa
gaagccctccagcatgccaggatagccattacatctctacccaggctttttgagttgggg
aggtcgccccctgctggttccacagtgcagcacatcctggatgatgcagccagagctata
accagtgagctgactgaagaaatccaggaacaggcgcagatgatgctgcagtttgcccag
gcagtctgcccccgagtcgtccagagatcgagtgttagcgagcagctggccaaccgcgtg
gccaacaaaacacgacaggccacccacttcatccatagcacagtgcagcaagtagagaac
agcatcagggaaaaactcagtgaactgaaagtgtcagtcagcgtctctctagtggagagt
atcattgaggaggttctgcaagacttgtcagtggctcagcaaaaactggacaagcattta
aaagaatactcccagcctttcagcagtaagaccaatgtgcctcagctaagagtggtggaa
aacgaattccctactgatgagtatgtgcctgtcatgtttaggaacagtttctgtacacgg
agtatccgcccagccccttcggtcaaaagtctgttggaaggggaaggcgagcagcaggct
cgagcgagtgcgcattcccagcaggaggtggaggagcgtgagagagcgcgagcgagggag
agagagagaggagggggaggggctcagggctccaggctgacagctgaggagagggggcgg
agcctgtcgttctcatcttcgttggtgaccagcctgtctgtcacgacagccgtgggtggg
gccaggaccttgggccccgcccggccagggatgggggcggagcctgccggctctggctgt
ggagcggcggcgggcagcaacagcacagagccccggcgtccggagcccgcgtctactcag
ccccctatggacctgcccatcgaaggccaaacgctgaggcactacacccgcacacggccc
agaccaaaccgccgcaacaggcaaccgcccagcaagcctcaggagcaggcagctgagagt
gagaatgaagccaatgagaatatggggagagtggatgagggcgtagaggagttcttcacc
aagaagatcatccctgatgaccccctaaagcaccagagggaggagcccctcaataaagca
cagcctgcagagtccacgtgtgtcacaaccacccctcctaccaccaccaccaccacgacc
cccacaccctccacagccccctccaaaaacattaagaagaagtttggcgacttttttgcc
tttaagaaggtacgtgctggtcgaggagccaaaggtgagggcgccccggagggaaaggtc
aaaaagacttcaatagcagacctcatccgacccctccgggaggcggcacgggccgagaaa
gaacgcgagaaggaaagggaaagggagaaggagagggagcgagagaaggagagagagaag
gagaaagagaaagcagaggaagatagcatcgtcaaggcacccaccaccactcccacgccc
accatcacagattcggccctcacagtaccagccgtagacgacaaaatggcacctagagca
ccctcacctcttctcatgcccatccttgccccatcggctgcctctgcctccacccccacc
cctcctgcctcctcgcctgccaaaactgaagaggccccagcattgtcacctgctgcacca
acctcccccaccaaaacccccagcccggtagcagccatgtcgccctcggagcgggagaag
agccgaacgctggagaagagccggacccccgatggggaaagaaggcccaagcctacacga
cgctcgctccgagagggcaaatctcagtccctcatcctgcttacggggctggagccagag
cacgacgctgcggccatacaggccaagaaacatgcatctgaaagttcctccagttttgaa
cagcggattcatggtttgcttcaccgcataggggtcaccaagacacctccatgcgactcc
aaaacaagccagagcaaagacgaggagctgaggaaagccaactcagagggggcaatacta
gacagtaaaccggagcctccacccacctacatgaagcctcgcacaatgtccacctcctca
gacaccaggcgaccagtcagaggaggcaatgtggagccactccgtgcagaccgcccacca
ctcccagagcgacccataggtcctctgccccccaaaccagccctcaagcccaccttaatc
ccaccaagcgagacccctacagcctctcggaccattacagctgcacccaggcagcccagc
ccctctccggatgcccagccactggcagtggaggctgcaccgaccacccaggcacagccg
aaagagcccccaaccccttcaccccgcaaagagacgccgccagccccgtcgccccgcagg
gtgctcagcacagacattcgtgagagagcagagagagcacagtctgtcactgaagagacc
ctccctaaaccacggccccgcatgaagccctctcctcaacgccgtgcggtctctgttcat
gaagacgccctactccagcacgctgccctactcgaccctgaggaactgaaagctgcattg
ccacggctgcagaggtcacctgtgcggaagcgagtgaatctcggggaactggagccctgc
tcagaggatttacctgagggtgaagaagctaagacagaagggaggggagatggcagtgga
caggccggcgggacagacagcactacagtcagcaagagcccaccagaagccagtgtggca
ggatccggagaggaggagagcaggcaggagcagagggagatggtgtcagagcaagatcag
cagcacacagcgcagggagaaacatcagaccaaagaactgaaacctcctcacctgagact
aacatggactga
DBGET
integrated database retrieval system
