KEGG   Colossoma macropomum (tambaqui): 118801542
Entry
118801542         CDS       T09004                                 
Symbol
pafah1b1a
Name
(RefSeq) lissencephaly-1 homolog A
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao00565  Ether lipid metabolism
cmao01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    118801542 (pafah1b1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmao03036]
    118801542 (pafah1b1a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmao04147]
    118801542 (pafah1b1a)
Chromosome and associated proteins [BR:cmao03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    118801542 (pafah1b1a)
Exosome [BR:cmao04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118801542 (pafah1b1a)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_EML Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_Vps41 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_SPT8 LisH Beta-prop_IFT140_1st LisH_PAC1 Beta-prop_DCAF12 Beta-prop_RIG_2nd eIF2A Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd LisH_2 ARMC9_LisH DUF2570 SutA-RBD
Other DBs
NCBI-GeneID: 118801542
NCBI-ProteinID: XP_036417771
LinkDB
Position
Unknown
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPIGQKRDPKEWIPRPPERYSLSGHRSPVTKVIFHPVF
SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVQFHPGGKFIVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKVAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagaggcaacgagatgaactaaatcgagcgatagctgattaccttcgt
tccaatggatatgaagaggcatattcagttttcaagaaggaggcagaattagatatgaat
gaggaattggataagaagtatgctggccttttggaaaagaaatggacttcagtcatcaga
ttacagaagaaggtgatggagttagaatcaaagctgaatgaagcaaaagaggagatcact
ttagggggacctataggacagaaacgagaccccaaagaatggattccccgtcccccagag
agatattctctgagtggccacaggagtcctgtcaccaaggtcatcttccatcctgtcttc
agtgtcatggtgtctgcctcagaggatgccacaataaaggtgtgggattatgagactgga
gactttgagcgtaccttgaagggtcacacagattctgtgcaggacatctcctttgaccag
actggaaagctgctggcctcctgctcggcagacatgaccattaaactctgggacttccag
ggctttgagtgcatcagaaccatgcatggccatgaccataatgtttcgtctgtagctata
atgcccaatggagatcatatagtatctgcctctagggacaaaaccattaaaatgtgggaa
gtggcaaccgggtactgtgtgaagacgttcactggccacagagagtgggtacgcatggta
cggcccaaccaggatggctccctgattgccagtagctctaatgaccagacggtgcgcgtg
tgggtggtggccacaaaagagtgcaaggctgaattgagagagcacgaacacgtagtggag
tgtatctcatgggctcctgagagcgcgcatcctactatactggaggccactggctctgag
actaagaagagtgggaaacctggaccgttcctgctgtctggctccagagacaagactatc
aaaatgtgggatgtcagcattggcatgtgccttatgacactggttggccatgataactgg
gtgcgtggtgtgcagtttcaccctggtggaaagtttattgtgagctgtgctgatgacaag
actttgaggatctgggactacaaaaacaagcgctgcatgaagaccttgagtgcccatgaa
cattttgttacctctctggattttcacaaggttgctccatatgtggtcaccggcagtgta
gatcagacagtaaaagtctgggagtgtcgctga

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