Colossoma macropomum (tambaqui): 118801580
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Entry
118801580 CDS
T09004
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04137
Mitophagy - animal
cmao04140
Autophagy - animal
cmao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118801580 (hif1al)
04137 Mitophagy - animal
118801580 (hif1al)
04148 Efferocytosis
118801580 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118801580 (hif1al)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118801580 (hif1al)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
118801580
NCBI-ProteinID:
XP_036417836
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MDSVPKRPNSDMRKLRSRDAARCRRSQETEVFYELAHSLPLARRVTSHLDKAAIMRVTLS
YLRMRQLLRSTTTKVEPGTEEEEDPTDAFYQQALAGFVLVMTEEGDMIFLSDNVSKYIGI
TQLELLGQSVYDFVHPCDQEELRDLLTTKSGLCKKKTERFIERNFFLRMKSTLTNRGRTV
NIKSATWKVLHCTGHMQTFSSELESSSPIGSYLTLLCEPIPHPGCVEFPLDSSTFLSRHN
MDMSFTQCDGRVTELVGYQPEDLVGRSAYEFFHALDFDHVTKSLHILFSKGQVCTGQYRF
LAKNGGFVWSETQATVLYNGKTSQPEAVVCLNFILSGVEHADTVFSVEQTRNDVKPDRLN
LTVMEVEDSEDELSSSSSSDLFNKLKDNPEDLLQLAPAAGDTIIPLTEHMDLSFCPPSSP
DSVPECPKDLCTPKLRQLLSPIFDSPSPGSPGSVEELPMDTGDVEKFFALKPEESTAQKG
LTEDLDEMDLDMLAPYISMDDDFQLTFLPQFPEAESSSADVLTTPSRKRGLEEDDDLPSL
TTNREKRHKDSPLEEELLLSHASLTGLLVTESEEIDPPPWKRSQLLTDRDPVLGGTQALG
NTSALMRDPFTSQKPDLRAQISGTISSLT
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggactctgtgcctaaaaggccgaactcggacatgcggaagctgcgctcgcgtgatgcg
gcccgctgtagaagaagtcaggagacggaggtgttttacgagcttgcccattccttgccg
cttgcaaggcgtgtcacatcccacttggacaaagctgccatcatgagagtgaccctcagc
tacctgcgcatgcgtcagctcctccgctccacaacaaccaaggtggagccaggcactgag
gaagaggaggatcctacagatgcattctaccagcaggcgctggctggtttcgttctggtg
atgactgaagaaggagacatgatctttctctctgacaatgtcagcaagtacatcggcatc
acacagctggagctgcttggacagagtgtgtatgactttgttcacccttgtgatcaagag
gagctgagagatctcctcaccactaagtcaggactttgtaagaagaagacagaaaggttt
attgagcgcaacttcttccttcgaatgaagagcaccctcaccaaccgaggaagaacagtg
aacatcaagtccgccacttggaaggtgcttcactgcacaggtcacatgcagacctttagc
agtgaactggagagttcgtcccctattgggagctacctgactctgctctgtgagcccatc
ccccacccaggctgtgtagagttcccactggacagcagcaccttcctctcccgccacaac
atggacatgagcttcacacagtgtgacggccgggtgactgaacttgttggataccagcct
gaggacctggttggccgatcagcctatgagtttttccatgccttggattttgatcatgta
acaaagagcttacacatcttgttctccaaaggtcaggtgtgcaccggccagtaccgcttc
cttgctaaaaatggaggctttgtctggtctgagacccaggccactgtcctttacaatgga
aagacttcccagccagaggctgtggtgtgcctcaacttcatccttagcggagtggagcat
gcagacactgtgttctctgtagagcagactcgtaatgacgtgaagccagacaggctgaat
ctgactgtgatggaggtggaggactctgaggatgagctgagtagcagcagcagctctgat
ctcttcaacaagctgaaggacaaccctgaggatctgctacagctggcaccagctgctgga
gataccatcatacccctgacagagcacatggacttgtctttttgcccaccatctagccct
gatagtgtccccgaatgtcctaaggacctttgcacccccaagctccgccagcttctctca
cccatattcgacagcccttctcctggctcacccggctcagtcgaggagttgcccatggac
accggtgatgtcgagaagtttttcgccctcaagcctgaggagagcactgctcagaaagga
ctgacagaggacttggatgagatggatctggacatgcttgctccgtatatctctatggat
gatgacttccagctcaccttcctgccccagttccctgaggcagagtcatcatctgcagac
gtgctaaccacaccttctaggaaaagaggcctggaggaagatgacgacttgccttcttta
accaccaaccgggagaagagacataaagacagccccttagaggaggagcttctgctcagc
catgcttccctgacgggcctgctggttacagaatcagaggagatcgaccctccaccttgg
aaaagaagtcagctcctgacagaccgggacccagtgctgggagggacgcaggcccttggc
aatacatcagctctgatgagggaccctttcacatcgcaaaaacctgatttaagggctcaa
atatctgggactatttcatccctcacctga
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