Colossoma macropomum (tambaqui): 118801877
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Entry
118801877 CDS
T09004
Symbol
brip1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03440
Homologous recombination
cmao03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118801877 (brip1)
03460 Fanconi anemia pathway
118801877 (brip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmao03400
]
118801877 (brip1)
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
118801877 (brip1)
DNA repair and recombination proteins [BR:
cmao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
118801877 (brip1)
FA (Fanconi anemia) pathway
Downstream FA components
118801877 (brip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ARCH_RTEL1
HBB
DUF1866
Motif
Other DBs
NCBI-GeneID:
118801877
NCBI-ProteinID:
XP_036418167
LinkDB
All DBs
Position
Unknown
AA seq
1126 aa
AA seq
DB search
MAGNTVEYTIGGVKIHFPCKAYPSQLAMMNSIVRGLNHGQHCLLESPTGSGKSLALLCSA
LAWQQAQYSKSDQNGGSSSCDVKKPDVTTPCQCACHSRVSDPHTSSSSTAFKPPVVDLTG
EGDAAQAITSPKEEDSACKRSTLSSRLSQKLQASLTTERGQDDDDFKADRKRMRAPAADQ
KSSKRRCLEKGVVYIDNDDDADLERPVAGAQSWTVELGSQARAEGSLPPAECYSPVSCSL
CPCASLREGQKAGEKAKDKDKEVNGKKTIPKIFFGTRTHKQITQIARELKRTLYSTVPMT
ILSSRDHTCVHPEVMPHANRNERCKELLEAKNGLSCRFYHNVHKMREQSSLQWVHGLHQA
WDIEELVRLGSKLRSCAYYAARELMQEACIVFCPYNYLLDPLIRESMEINLKGQIVVLDE
AHNIEDCARESASFTLNQTQLLQAREEIEGLVTYNIRRSHHEPLLAFCCSLLNWIQESSS
ALQERDYESACKVWTGKEVLGIFHGLGITADTFSALQKHLEVVLEKEERIGLVNGREDTV
QIPTISSSTQSVLKSLFMVLEFLFRQNCRFADDYRVALQQSYIWTTQQDAPDAQGFFARP
NRRRQSTRTKTLVHTLSFWCLNPAVAFSDLSDSVRSIVLTSGTLSPMGSFSSELGIKFSI
QLEASHVISKSQVWVGTVGIGPQGRRLCATFQHTETFAFQDEVGALLLKVCQTVSRGVLC
FLPSYKMLDKLRDRWMNTGLWEKLEERKTVIAEPRGGAKSDFDELLQTYYEAIRQSGPRD
GALLIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHSKSRGLLPG
GRWYEIQAYRALNQALGRCIRHKNDWGALILVDDRFRANPNKYITGLSKWVRQLVKHHDN
FTSAIQSLVSFSQIQQGAVQTHSEELGQMAPASSSVSGSDMSTLLSSADPPILPLSSEVQ
VVVPSVNSTSEPGDQKFPQPPSEPPAPECNGYKNLPTSRSSLNLFTSTPVSARLRTPLFK
CKDSKKDTGQSGNPDISKKHTIPALEEEQTAQTGGLTKSGLHEIPPDPPPQQLDLSPLKT
ALDCTSSKDISVVEPEDREEQDQSIFYTPELFEEEEEDEEATTVEA
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggctgggaatacggtggagtacactataggaggagtgaaaattcacttcccctgcaaa
gcctatccctctcaacttgctatgatgaactcgattgttcgtggcctaaaccatgggcag
cactgcttgttggagagccctactgggagcggcaagagcttagccctgctgtgctcagcc
ttggcatggcagcaggcacagtatagtaagtctgaccagaacggtggaagctcctcatgt
gatgtcaaaaagccagatgtcaccactccatgtcagtgtgcgtgtcacagtcgagtttct
gacccacacacttcttcgagcagcacagcattcaaaccacctgtggttgatcttactggt
gaaggtgatgctgctcaagccatcacttctccaaaagaagaggacagtgcgtgcaagaga
tccactctgtcttccaggctctctcagaagcttcaggcttccctcactacagagagagga
caagacgatgatgatttcaaggctgataggaagcgcatgcgggcacctgctgctgaccag
aagagcagtaagcgaaggtgtctggagaaaggtgtggtttacattgataatgatgatgat
gcagacctggagaggcctgtggctggagctcagagctggactgtggagctaggcagtcaa
gccagggctgagggtagcctgccacctgcagagtgctattctcctgtgtcttgttctctg
tgtccctgtgccagcctcagagaaggacagaaggcaggtgaaaaggccaaggacaaagac
aaggaggtcaatgggaagaaaactatacccaagatcttttttggtacacgcactcataaa
cagatcacccagattgctcgagagctgaagaggacgctctactccactgtccccatgact
atcctgtctagccgagaccatacctgtgtgcaccctgaggtgatgccccatgccaaccgc
aacgagcgctgcaaggaactgctagaggccaagaacggcctatcctgtcggttctaccat
aatgtgcataaaatgcgggagcagagcagcctgcagtgggtgcatgggctacaccaggcc
tgggacatagaggagctggtgcgtctaggcagtaagctgcgctcttgtgcctactatgca
gctcgagagctcatgcaggaagcttgcatagtcttctgcccttacaactacttacttgac
ccccttatccgggagagtatggaaatcaacctgaaagggcagatcgtggtgctagatgag
gcccataacattgaagactgtgcccgagagagtgccagctttaccctcaaccaaacccag
ctgttgcaagcccgtgaagagattgagggcctagtgacatacaacatccgtcgtagccac
catgagcctctcctggccttctgctgcagtctactcaattggatacaggagagctccagt
gccttgcaagaaagggattatgagtctgcatgtaaggtgtggacagggaaggaagttctg
ggcattttccatggccttggcatcacagctgacactttttcagcactgcagaagcatcta
gaggtggtcctggagaaggaggagcgaattggtctggtgaacgggagagaggacacagtc
cagattcccaccatcagctccagcactcaatctgtgctcaagagcctcttcatggtgctg
gaattccttttccgacaaaactgcaggtttgcggatgactaccgtgtagccctgcagcag
agctatatctggaccacccagcaggacgctcctgacgcccagggcttttttgctcggccc
aatcgccgtcgccagagtacccgcactaaaaccctggtgcacacactcagcttctggtgc
cttaaccctgctgtggcgttctctgacctgagtgattcagtacgcagtatagtgctcaca
tctggcaccctgtcccccatgggctccttctcctcagaactgggcattaaattctccatt
cagctggaggccagccatgtcatcagcaagtcgcaggtgtgggttggcacagttggaatt
ggtccccagggccgcaggctgtgtgccacgtttcagcacactgagacatttgccttccag
gatgaagtgggtgcactgctgctgaaagtgtgccagacagtgagccgaggagtgctgtgc
ttcctgccatcctacaagatgctggataagctgagggaccgctggatgaacacaggcttg
tgggagaaactggaggagcggaagactgtgattgcagaaccacgtggaggagcaaagagc
gactttgatgagctgctgcaaacgtactatgaggccatcagacaaagtggacccagagat
ggagcactgctgattgcagtatgcagagggaaagtgagtgagggactggacttcactgat
gacaatgctagagcggtggtcactattggcattcccttccccaacatcaaagaccttcag
gttgagctgaagatgaaatacaatgatcagcattccaaatccagagggcttcttcctgga
ggtcgctggtatgagatccaggcctatcgggctctaaaccaggcattgggaaggtgtatt
cgacataaaaatgactggggggcacttattctagtggatgatcgttttagggctaacccc
aacaagtacatcacaggcctgtcaaagtgggtgcgtcagctggtgaagcatcatgataac
ttcactagcgccatacagtccctggtgtccttctcccagattcaacagggggcagtgcag
acccacagtgaggagcttggtcagatggcccctgcgtcttccagtgtctcagggagtgac
atgtcaactctcttgtcctctgctgaccccccgattttgcccctgagttctgaggttcag
gttgtcgtcccttctgtcaacagtacttccgaaccaggtgaccagaagtttccacagcct
ccatctgaaccaccagctccagagtgtaatggctataaaaatttgcccacgtcacgatcc
tcactcaacctgttcacctccactcctgtcagtgcccgattgagaactcctctttttaaa
tgtaaagactccaaaaaggacactggccagagtggaaatccagacatcagtaagaagcat
accattccagcgcttgaggaggaacagacagctcagacagggggtcttaccaagagtgga
ctgcatgagattccacctgatcctcctcctcaacaactagacctgtctcctctaaagaca
gccctggactgtacatccagcaaggatattagtgtagtagagccggaagacagggaagag
caggaccagagtatcttctacaccccagagctgtttgaagaggaggaggaggatgaagag
gctaccacagtagaagcgtag
DBGET
integrated database retrieval system
