Colossoma macropomum (tambaqui): 118801946
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Entry
118801946 CDS
T09004
Symbol
msi2b
Name
(RefSeq) RNA-binding protein Musashi homolog 2b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118801946 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118801946 (msi2b)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118801946 (msi2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
118801946
NCBI-ProteinID:
XP_036418246
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MEADGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVAAAAAVAAARGSGRAARGRGGYAAYPHSTGPGFPDYGFYSSPSDQRGP
PFSFADYGSLGPQAAQLLQSEHATSACNSPLQHLPSPDQYKSPGTNPPRPGAFPGASSPG
PVADLYGPTSQDSGVGNYISAASPQPGSGFGHSIAQSLSGGPGKAGRSF
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacgggagccaagccacatctgggagtcctaacgattcacaacacgaccca
ggtaaaatgttcatcggtggcctcagctggcaaacttcaccagacagccttagagactat
tttagtaaattcggagaaatcagagaatgtatggtgatgagggatcccacgaccaaacgc
tccaggggatttgggttcgttacgtttgcggatgcggccagtgtagataaagtcttaggt
caacctcaccacgaattagactcaaagacgattgaccctaaagttgccttccccagacgt
gctcaacccaagatggtcacaagaacaaagaaaatatttgtaggcggattatcagctaac
acagtagttgaagatgtgaagcagtatttcgaacagtttggcaaggtagaggatgccatg
cttatgtttgataaaaccacaaataggcatagaggatttggctttgtaactttcgagaat
gaggatgtggtggagaaagtctgtgagattcattttcacgaaatcaataataaaatggta
gaatgtaagaaggcccaacccaaggaggtgatgtttcctccggggacgcgagggcgagcc
aggggtttgccctacaccatggacgccttcatgctaggaatgggcatgctgagttaccca
aacatcgtagcgacgtatggccgaggatacactggcttcgccccgagctacagctaccaa
ttccctggttttcctgcgacggcatacggtcctgtggcagcagcggcggcagtggcagca
gcgcgtggctcaggtagggcggcccgtggaagaggcggctacgcagcatacccgcacagc
acagggccaggcttccccgattatggtttctattcctcgccaagtgaccaacgggggccc
cccttctcctttgcggactatggctccctgggcccgcaggcggctcagctgctgcaaagc
gagcatgccacctccgcctgcaactcccccctgcagcacctgcccagcccggatcagtat
aagagcccaggcaccaaccctcctcggcctggagccttccctggagccagcagccccggg
cctgtggctgacctctacggccccaccagccaggactccggcgtgggcaattacataagc
gctgctagcccccagcccggttccggtttcggccacagtatcgcccagagtttatcagga
ggtccggggaaggcaggccggagtttctaa
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