Colossoma macropomum (tambaqui): 118801970
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Entry
118801970 CDS
T09004
Symbol
vcpip1
Name
(RefSeq) deubiquitinating protein VCIP135
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmao01002
]
118801970 (vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118801970 (vcpip1)
Enzymes [BR:
cmao01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118801970 (vcpip1)
Peptidases and inhibitors [BR:
cmao01002
]
Cysteine peptidases
Family C64
118801970 (vcpip1)
Ubiquitin system [BR:
cmao04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
118801970 (vcpip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
RA_2
Motif
Other DBs
NCBI-GeneID:
118801970
NCBI-ProteinID:
XP_036418278
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MSSAQGTKKRDKRILSGICPDSKCQAKLFFPAYGSISIECTECGQRHEQKNLLNVEEVTD
PDVVLHNLLRNALLGVTGAPKKGTELVKVMGLSNYHCKLLSPILTRYGMDKQTGKAKLLR
EMNQGEIFDCSLLGGRAFLIEQEHVSTVGYGKDRSGSLIYLHDTLEEIKKANNNKECLIP
VHVDGDGHCLVHAVSRALVGRELFWHALRENLKLNFKQNLDRYKALFQDFIDTAEWEDII
NECDPLFVPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLVPEE
QCRGKDGALNKPICIAWSSSGRNHYVPLVGVKGMPLPQLPTELLPKAWGVPQELICTYVS
LEPCGGCMIGGDRSLQEKYLLRLVSAMENVFMEKHGIHPALVADVHQYVYRRTGVIGIQP
EEVTEAAKKSVQENRLHRCLICGALSEHHVPPEWLVPGGKLYNLAKSTHGTLRGDKNYSF
PLNNLVCSYCPERDTLLPDYKLSSLSTCSWCHGTSMRHVHGDGSVVYLDGDRTTTRSQGG
KCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVYWFQYEPDPALNSNVYEVAMRLV
TKHFPGEFGSEILVQKVVNTILHHTAKKNPDEYHPVAIEAAHMQGQGQGGGEVVESDANP
PTKIILTGQKGRTLHKEELVMSRAERSLQHSISEQAALSQRRRTQRQRMQDQSAEPRPVS
PASSSSSSAPPTPTKAPPPSGEKKIRVTTSDGRQAMLQLQAHTTYAELQAAIAQALNLQP
HQQCIRHGFPPRELLPPPPEQQDLPVALQHGDRITVEVLKEKVLDTQTHTGSETHTSDAH
TLTEPRLRRTSSREMQDNIDLEMSSLCLLATLMGEDVWSYAKKLPHLFQQGGVFYNIVKK
DMGLMDGKHCTLPHLTGKTFVFNAAEERLELCVDAAGHFPVGPDVEDLIQEALSQLCSET
SSRSREGSPAHSLKLGSGGVVRKKEQTVTAFQGKGHSLGSTLEHRPIRRQHSSGVDLSGS
ARGEGLTLSGEELVRVAPGMLTLREGRGGVELEPAAIEAQRRRLQEMVSNIQASMDKHLR
QQTTAAATSAATTKQDGKEVEPDEQEEMESQGAEPPSTSEPMDQS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcagcgcaaggcacaaagaaaagggacaagcgaattttatcaggtatctgccca
gattccaaatgccaggcgaagctattcttccctgcttatggctcaattagcatcgaatgc
actgaatgtggccagcgtcacgagcagaagaatcttttgaatgtggaagaagtaaccgac
ccagatgttgtgcttcataatttactgagaaatgccttactcggtgttacgggagctccg
aagaagggcacggagctggtcaaagtgatgggtctctccaactaccactgcaagctgctg
tcaccgattctcacccgttacgggatggacaaacaaacggggaaagcgaaactgctacgg
gagatgaatcagggcgagatctttgactgttctttgctgggcggtagggcctttcttatc
gaacaggagcacgtatcgacagttggttatggtaaggacagatccggtagccttatatat
ctccatgacactttggaggagattaagaaagccaacaacaacaaagaatgtctcattcct
gttcatgtggacggagatggccactgcctagtccatgctgtgtccagggcgttagtgggt
cgcgaactgttctggcatgcattaagagaaaacctcaaacttaatttcaaacagaatcta
gaccgctacaaggctctcttccaagacttcattgacacagcagaatgggaggacataatc
aatgagtgtgaccctttattcgtccccccagagggagtcccactcggattgagaaacata
cacatatttgggttggcaaacgtgctgcaccgtcccataatcctcctggactctctcagt
ggtatgcgaagctcaggtgactactcggccacgttccttccaggcctggtgcctgaggag
cagtgccggggaaaggatggcgccctcaacaagcccatttgcattgcctggagtagctca
ggcaggaaccactacgtccctctggtgggcgttaagggtatgccactgccccagctgcct
acagagctgttgcccaaagcttggggtgttccgcaggagcttatctgcacatacgtgagt
ctggaaccctgtggaggatgcatgattgggggtgaccgaagcttgcaggagaaatatctg
ctccgtttagttagtgccatggagaatgtcttcatggagaagcatggcatccaccctgcg
ctcgtggctgatgttcatcagtacgtttaccgccgtacaggagtgatcggcatccagcct
gaagaggtgactgaggcggcaaagaagtcagtgcaagagaatcgtctgcaccgctgtctt
atttgcggtgcgctgtctgagcaccatgttcctcctgagtggctggtgcctggtgggaaa
ctctacaacctggccaaatccactcatggcactctccggggggacaagaactacagcttc
cccctgaacaacttggtatgttcctactgccctgagagggacacgctgctgcctgactac
aaactcagctcgctttccacctgctcctggtgccatggaacctctatgcggcacgtccat
ggtgacggatcagtggtgtacctggatggggaccgcaccactacacgctcgcagggaggg
aagtgcggctgtggctttaaacattactgggagggaaaggagtatgataacctgccagag
gcgtttcctatcacgctggagtgggggggccgtgtagtccgagagactgtttactggttc
cagtatgagccagacccagcactgaacagcaatgtatatgaggtggcaatgcgccttgtc
accaagcacttccctggagagtttggcagtgagattctggtacagaaggtggtgaacacc
atcctgcaccacacagccaagaagaaccctgatgaataccaccctgtggccatagaggct
gctcacatgcagggccaaggacagggtggaggagaggtggtggagtcagatgcgaacccc
cccacaaagatcatcctaacgggtcagaagggccgcacgctacataaggaggagttggtg
atgagccgagctgagagaagtctgcagcacagcatcagcgagcaggcagctctgtcccaa
cgcagacgcacacaacgccagcgtatgcaggaccagagtgcagagccacgccctgtctcc
cctgcctcgtcctcttcttcctcagctccaccaacacctacaaaagccccaccccccagc
ggcgagaagaaaatccgtgtgacaacgagtgatgggcggcaagcaatgctacagctgcag
gcccacaccacctatgcagagctacaagcagctatcgcccaggccctcaacctgcagccc
catcagcagtgcatccggcatggcttcccccctagggagctactgcccccaccgcctgag
cagcaggacctgcctgtggccctgcagcatggagaccgcatcactgtggaggtactgaaa
gagaaagtcttggacacacaaacacatactgggtctgagacgcacacatcagatgctcat
accctaacagagccccggctcagaaggaccagcagccgagagatgcaggacaacattgac
ctggagatgtcatcactctgtctcctagcaacgctaatgggtgaagatgtgtggtcatat
gctaagaagttgcctcatttgtttcagcaaggaggagtcttctacaacattgtcaagaaa
gacatgggtctgatggatgggaagcactgcactctgccacacctaaccggcaagacgttt
gtgttcaacgcagcagaggagcgtttggagctgtgcgtggatgcagcaggccacttccct
gtgggccctgatgtggaggaccttatccaggaggccctttcccagctttgctctgagacc
tcctctcgcagccgtgagggaagtcccgcccacagccttaagctaggcagcggtggggta
gtgcgcaagaaggagcagaccgtcacggctttccagggcaaaggtcactcactggggtct
actcttgagcaccggccaatcaggcggcagcacagcagtggcgtggacctgagtggcagc
gctcgtggagaagggctgacgttgtcaggggaagagcttgtgcgtgtggctccaggcatg
ctcaccctgcgtgaggggcgtggcggggtggagctagagccagcagcaatcgaagctcag
aggcgtcgtctgcaggagatggtgtcaaacatacaggcctctatggacaaacacctacgg
cagcagacgacagctgctgccactagcgctgcaaccactaagcaagatgggaaggaggtg
gagccggatgagcaggaagagatggagagccagggggcggagcctccaagcacctctgag
cccatggaccagtcctga
DBGET
integrated database retrieval system
