Colossoma macropomum (tambaqui): 118802963
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Entry
118802963 CDS
T09004
Symbol
ddx39aa
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmao03041
]
118802963 (ddx39aa)
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118802963 (ddx39aa)
Spliceosome [BR:
cmao03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118802963 (ddx39aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
118802963
NCBI-ProteinID:
XP_036419321
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAENDVDNELLDYEEDEEPQGATESAVPAVKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKCSVFFGGLSIKKDEEVLKKSCPHIVVGTPGRILALIR
NKTLNLKNIKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQVMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatgatgttgacaacgagctgttggactacgaggaggatgaagagccacag
ggagcgacggagagtgcagtcccagcagtgaagaaggaggtaaaaggatcctacgtctcc
atccacagctctggcttccgagacttcttgctcaaacctgagctgcttcgtgccattgtc
gactgtggctttgaacatccatctgaagtccaacatgagtgcattccacaagccattctg
ggcatggacatcttatgccaagccaagtctggcatggggaagacggcagtatttgttctc
gccacactacagcagattgagccggttgatgggcaggtgtctgtgctagtgatgtgtcac
acacgtgagctggccttccagatcagcaaagagtatgagcgcttctccaagtacatgccc
acagtgaaatgctcagtgttctttggtggtctgtccattaagaaggacgaagaggtgcta
aagaagagctgcccgcacatcgtggttggcacaccaggccgcatccttgcgctcatccga
aacaagaccctcaacctcaaaaatatcaagcacttcgtcctggatgagtgtgacaagatg
ttggagcagcttgatatgaggcgggacgtgcaagatatcttcaggctgacccctcacgag
aagcaggttatgatgttcagcgccacactcagcaaagagatccgacccgtctgtcgcaag
ttcatgcaagacccaatggaggtgtttgtggatgacgagacaaagctaacactgcatggc
ctacagcagtactactgtaagctgaaggacagcgagaagaaccgcaaactctttgacctg
cttgatgtgcttgaattcaaccaggtggtgatctttgtgaagtccgtaccacgctgcgtc
gctctctcgcaacttctagtggagcagaacttccctgccattgccatccacagaggcatg
gcccaggaagagaggttgtcaaggtatcagcagtttaaagatttccagagaaggatcttg
gtggcaactaaccttttcggcagggggatggacattgagcgcgttaacattgtcttcaac
tacgacatgcctgaggactccgacacatacctgcatagggtggctcgtgctggtcggttt
gggaccaagggtttggccgtcacttttgtgtcggacgagacagatgccaagaccttaaat
gacgtccaggaccgctttgaggtgaacgtggctgaactgcctgatgaaatcgacatttct
tcctacattgagcagtccagatga
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