Colossoma macropomum (tambaqui): 118803193
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Entry
118803193 CDS
T09004
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118803193 (npas1)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118803193 (npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
118803193
NCBI-ProteinID:
XP_036419618
LinkDB
All DBs
Position
Unknown
AA seq
772 aa
AA seq
DB search
MAAMPFVTEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRHFASQGDPPWSPLMEGENNCNKVRRSSHSLA
TDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIKPHLRAEAGCQVAQESISSSASTSSLAGTPEPAPSSPLSSGDELAERGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSSRSLHRPMGLVALAHTLPPSTL
NEVRMESHMFVFRVNMDLQVTYCENRISEYMDLSPAEVVGHTCYHFIHVEDLDMIRQSHE
DLLRKGQVVTGYYRWLQRRGGYVWVQSCATVSINHKAPHERNVIWVNYILSRTELPDTPL
DLLQLPETLRAERLRANSSPRDISPKAHGPTGTQPGKGGGSRNEPERKGRESYAHPTVNQ
SDDRRKRPHRSSPENGPPETRRRMEAFRQREDSPSGSSDPGSDSDADEEEEEEDKESEWD
HNGNSKRVKSEEGVPKQAGRVSGLDKAHNGRAVIQQLKSVVTSTAGSNIKTERSTTGGRW
GHPHPSAHATSGINGCSPPSQAPDPIATEAPAKGLFSPPSPTLSSPIPASPLPREERPIH
SARGPDYELLQRLAAGGAAGRVLFHPLALGPQGPQSLYAPSTIRYAPPELPTTHTDSHRT
DHTPKSPAFFPHLQRIAGLPPFSGFSPSEPPFPPSLPFCMNGLRGAAGTEED
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatgccgtttgtcactgaggggaagtgtgtgagtgtggagtgggacttcctg
caaggactcctcgccaaaccacccaccctgccctgcttacaaaacctgcgtaaggagaag
tcacgaaacgcagcacgatctcgtcgtgggaaagaaaactttgagttttttgagctggcc
aagatgcttcctctccccggcgccattaccagccagctggacaaggcctccgtcatcaga
ctgaccatcagctacctgcacatgagacactttgccagccagggagacccaccctggagc
cccctgatggaaggggagaacaactgcaacaaggtgcggagaagcagtcattcactcgca
actgacatatttgagcagcacctgggagcacatctactacagtctctggatgggtttgtg
ttcgtggtcagtcaagagggccgattcctgtacatctctgagactgtgtccatctatctg
ggcctctcacaggtggagctgactggcagtagtgtgtttgactacatccatcctgcagac
catgtggagatggcagagcgtcttggaattaagccacacctccgcgcagaggcgggctgt
caggtggctcaagaaagcatctcaagctccgcctccacatcctctctggctggcacacct
gaaccagccccttctagtcctctctcatccggggatgagctggcagagcgaggtttcttt
atccggatgaaatccaccctcactaagcgcggactccatgtcaaatcttccggttataag
gtgatccatgtaactggccggattcgctgtcgccccgcccttgtgccaggctcctcccgc
tcgctccatcggccaatgggactggtcgcacttgctcacacgctcccaccctccactctt
aatgaagtgcgcatggagagtcacatgttcgtcttccgtgttaacatggacctccaggtc
acctactgtgagaacaggatctctgagtatatggatctgagcccagctgaagtggtggga
catacttgctatcacttcatccatgtggaggatttggacatgatccgtcagagccacgaa
gacttgctgcggaaagggcaagttgtgactggttactatcgctggctgcagaggagagga
ggttacgtctgggtccagtcatgcgccactgtgtctatcaaccacaaagccccccacgaa
cgcaacgtcatctgggtcaactatatactgagtcggacggaactgccagacacaccgctg
gatttactacaactcccagaaactctgagagccgagcgtctacgggcaaactcctctcct
cgggacatctctccaaaggcacatggccccaccggaactcagccaggaaagggtggagga
agccggaacgaacctgagcgtaaaggaagagaatcatacgctcacccaactgttaaccag
tcagacgataggagaaagaggcctcatcggtccagccctgaaaacggtcccccagaaacg
aggaggcgtatggaagcatttcggcaaagagaagacagtccttctgggtcttcagatcca
ggcagcgacagtgatgcagatgaggaggaagaagaggaggacaaggagagtgagtgggac
cataatggcaacagcaagagagtgaagagtgaggagggcgtgcccaagcaggccggcagg
gtcagtggtctggataaagcccataatggccgcgctgtgattcagcaactgaaaagcgta
gtgaccagcacggctggatcaaacattaaaactgagcgttcaaccaccggagggcgatgg
ggtcaccctcaccccagtgcccatgccaccagtggcataaatggctgcagccccccttct
caagctccagacccgatcgctacagaagctccggccaagggccttttcagtcccccgtct
cctaccctgtcctcacccatcccggcttcgccactgcccagagaagagcgcccaattcac
agtgctcgcggcccagattatgagctcctccagagactggctgcaggtggggcagctggc
cgagtcctcttccacccattggccctcggccctcaggggcctcagagcctttacgccccg
agcactattcgctacgcaccgcctgagctgcccacgacgcacactgacagccaccgcact
gatcacacccccaaatcgcccgctttcttccctcacctgcagaggattgctgggctgcca
cccttcagcggcttctcaccctcagaaccgccatttcccccatcgctgcccttctgcatg
aacggactgagaggggcagcaggaacggaggaggactga
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