Colossoma macropomum (tambaqui): 118803272
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Entry
118803272 CDS
T09004
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118803272 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118803272 (scarf1)
Membrane trafficking [BR:
cmao04131
]
Endocytosis
Phagocytosis
Scavenger receptors
118803272 (scarf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_PEAR1L
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
118803272
NCBI-ProteinID:
XP_036419744
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MCSGSGSSHEKRGMDELKRILACLGLLFLCSLAYAQKLSPTGKNVCLSPRDSSHVCCSGW
AQQGEECTIPLCEGEEACMLDEVCVYPGVCRCKPGFYGYKCQTRCPPRLWGSDCRKLCLC
HPHGHCDAATGECTCLPSRWGNLCQNSCKCSRHGRCDPVYGNCTCDEGWWSSTCNKACQC
HQGTSTCDQTTGRCLCKEDFYGLKCSLRCNCNSSPCLQHTGDCLCRRGRWGRSCDRNCIC
DLSHGDCDPYTGNCMCEPGYMNPLCHEPCSAGFYGRGCTQSCGHCEGNRPCSKLDGSCDA
CAPGWNGSRCDQPCPLGYYGIRCQEVCPHCRKKEPCDATTGECSRCDPGLTGPRCDQPCP
KGTFGDGCRFQCSPCYHGHCDQVTGSCICQPGFLGESCNSSCPERLYGINCSLSCDCGFD
KCHPATGACPYSSRAGLLAGLLVPLLLLVLALLFCCCCCGSPADGKDRVAVGDGSTTGRM
KHHVYTVLANMSAAMPCLTLWSSGLPRVTVSHHDPELTFNHSFIEPPSSGWVTDSFETDE
EGEALYCIPPREDIPAVAGGEFQELSSKCNVFPDPSAFSSEDMSLAFGIPRTSSIAKSKR
PSVSFAEGTKFSSKERRGSAQELPTNARKSKAPWGVLMLSALQQGNHGQVEGEKEECTDE
ANASTEDQEANSAPETSQADSERCSSAPSKTYLTVPGSRRRTLSNTRKNLQPQASSDGQA
DMEKVTTVYMTVGKPIQVAKPESSSEGPVQAMLRRLGSIQRQKEEANRPKGKGPAMTKPP
RRKLGARASVWEQAGGPGPSEVVIRKPSRKKQILAGATDSPHENSTPKRPLSSTLNSVPE
SPVQGSVEGTDPSTNSETNTQSDAGYETVAPSDEASTVSEVIVNETLAAQDEGPSYENVY
IKPS
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctggttctggttcttcacatgagaagagaggcatggatgaactgaagaggatc
ttggcctgcctaggtctgctctttctctgctctctggcttatgctcagaagctctcgccc
acagggaagaatgtctgtctcagccccagggactcctctcatgtgtgttgttctggatgg
gctcagcagggtgaagagtgcactataccactctgtgagggtgaggaagcctgcatgcta
gatgaggtgtgtgtgtatccaggagtgtgcagatgtaaacctggcttctatgggtacaag
tgccaaacccgctgtcctcctcggctctggggctcagactgtcgcaaactctgtctttgc
caccctcacgggcactgtgatgctgctacgggcgagtgtacctgcctgcccagccgctgg
ggcaacctgtgccagaacagctgtaagtgtagccgtcacgggcgctgtgacccagtatat
ggaaactgcacctgtgatgagggctggtggagctctacctgcaataaggcctgccagtgc
caccagggtacgtccacttgtgaccagacaacgggccgctgcctctgtaaggaggacttc
tatggcttgaagtgcagcctgcgctgcaactgcaactcgtcaccctgcctgcagcacacg
ggggactgtctgtgtcggcggggccggtgggggcggagctgcgaccgcaactgcatctgc
gacctcagccacggagactgtgacccatacacaggcaattgcatgtgtgagccgggctac
atgaaccctttgtgccatgaaccatgcagtgcaggcttctacgggagaggctgtacacag
agctgtggacactgtgaggggaacaggccgtgctccaagctggatggctcatgcgatgcc
tgcgctccagggtggaacggctcacgctgcgaccagccctgtccactgggttactatggc
atccgctgccaggaggtgtgtccccactgcaggaagaaggagccatgtgatgccacaaca
ggagagtgctcacgctgtgacccgggcttgaccggaccaaggtgtgaccagccctgccct
aaggggacttttggagatggttgtcgtttccagtgcagcccctgctatcatggtcactgt
gatcaggtgacaggaagttgtatttgccagcctggcttcctgggtgagagttgcaacagt
tcgtgtccagagcgtctgtacggaataaactgctctttgtcctgtgactgtggatttgac
aagtgccatcctgcaactggggcatgtccttacagcagtcgagcagggcttcttgcaggg
cttctggttcctctgctgcttcttgtccttgcattattgttttgctgctgctgttgtgga
agtccagctgatggaaaagatagagtggcagtaggggacggcagcacgacgggccgcatg
aagcatcatgtctacacagtgcttgccaacatgagtgcagccatgccatgcctcactctc
tggtcctctggacttccaagagttacagtgtctcatcatgatccagagctcacctttaac
cacagttttatcgagccaccctcctcaggctgggttactgactcctttgagactgatgag
gaaggagaggcgctgtactgtatcccgcccagagaagacatcccagctgtagcgggaggt
gagttccaggagctgagctctaagtgtaacgtcttccctgatccgtctgcgttcagcagt
gaggacatgtctctggctttcggcatcccccgtacctccagcatcgccaagtccaaacgg
ccctccgtctcctttgctgagggcacgaagttcagctctaaagagcgccgtggctcggca
caagagctgccaactaatgcccgcaagtctaaagccccctggggggtccttatgctctct
gcattgcagcaggggaaccatgggcaagtggaaggagagaaggaggaatgtactgatgag
gctaatgcctccactgaggaccaagaggctaattcagcacctgagacttctcaggcagac
tcagagaggtgcagctctgcaccctcaaaaacttatctcaccgtcccaggcagtcggcga
cgcacactgtccaacaccaggaaaaaccttcagccgcaggcctcctctgatggccaggca
gatatggagaaagtaaccactgtctacatgactgtgggcaaacctattcaagtagcaaag
cctgagagcagctctgaagggccagtgcaggccatgctacgcagactgggcagcattcaa
agacagaaagaggaagcaaaccggcccaaaggaaaagggcctgccatgacaaaaccccca
cgcaggaaactgggggcacgggccagtgtctgggagcaagctggtgggccaggcccatct
gaagtagtcataagaaagcctagtcgcaagaaacaaatcttggccggggcaacagattct
ccacatgagaacagcacccccaagaggcccctgtcctccacactgaacagtgttcctgaa
agccctgtgcaagggtcggtagagggcactgacccaagcacaaattctgaaaccaacaca
cagtcagatgcaggctacgagacagtggctccatctgatgaggcttccacagtatcagag
gtcattgttaatgagactctggcagcacaagatgaagggcccagttatgagaatgtttat
ataaaaccttcatga
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