Colossoma macropomum (tambaqui): 118803489
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Entry
118803489 CDS
T09004
Name
(RefSeq) F-box DNA helicase 1-like
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmao04121
]
118803489
Enzymes [BR:
cmao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118803489
Ubiquitin system [BR:
cmao04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118803489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
F-box-like
UvrD_C_2
AAA_19
F-box
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-GeneID:
118803489
NCBI-ProteinID:
XP_036419873
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MAPKRKANINQSKSPKTPAKRRRTDTGTDNNQAKITEYYRPLSLRQDQVPLKTEAKLPNT
SYPSQVNIQDLPSHLLQAVFSYLPIQQLCLHVKCVCRSWREIISNPEFLPWRKLYYNYQQ
GDIDAKQQVQHYLFENNITKENKQCVINLIRFLSPKFEACEGEISRFVRGHRLYDQAKDC
MRTTQLLNSIKAEYKWVGLVVLMLLLADGVEDVEALVFHLESSSCPLSHTNLSELLWALS
TLLLAMTHTGIRISSRLHYNVFYVLFQMENTAPPVEGSRGTGEKQLQMTHEQQCIINHNM
QPSHVVKVEAFAGTGKTNVLIKFSQQRPNLRLLYVTFNNAVAKKARRWFPKNVECRTIHS
LAYNAVGKRYNTLKKVTDKMKLFFLSKILPEGKRGYVNAKVVSQTIDTFCQSTDSHISTK
HVPLEYKNTNGLIQTTKPHEKREFVNIAKDVWSKIIKEEPREHHAYCITHDGYLKLWQLQ
KPILKQYDIIMIDEAQDCSPVIMDIWLSQPCAKIFVGDPHQQIYAFKGAVNALHTISHTH
LYYLTQSFRFGSEIAYTGTAVLDACKKVKRSLLGAEQDGSVCGDDSEVVDSLRSGSGKGD
GRIAVLCRKNVTVFSEAARLVQANPECKIHFIGGVLKLKLKDIEDIWTLKSRRQWEYVGY
SQSWENRNRKEFRNPFIQHFSRHGGFEALQRYATESEDEDLTYKLTVVKKYGTQIPHLVS
CIIASATKNIQQADFILGTVHKSKGLEFHTVIMADDFKTVPRAASPLRVSLPRDVQEDEW
NLLYIAVTRAKRKLFLNKTIISILEMKGHCFLQSGMIMADPPFVCCAPYRRTCGMVNGIA
MRKMPVTYVCDQEGSAVSWKCEDGGLLCTSCVKRRLGVLSALLAIPSSTS
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaagcggaaagcaaacatcaatcaaagtaagagtccaaagactcctgctaaa
agaaggaggacagacacagggacagacaataaccaagcgaagatcactgaatactacagg
cctttgagtttgagacaggatcaggtgccattgaagacagaggcaaagctcccaaacacc
tcatacccatcacaagtgaacatccaagaccttccatctcacctgctgcaggctgtgttt
tcctacctgcccatacagcagctgtgtctccatgtcaaatgtgtctgccgctcctggaga
gagatcatatcaaacccagagtttctgccctggaggaagctctactataattaccagcag
ggagatatagatgctaagcagcaggtgcagcattacctgtttgaaaataacatcaccaaa
gagaataaacagtgtgtgattaacttaatcaggttcctgtcaccgaagtttgaagcatgt
gagggtgagatatctcggtttgtgaggggacacaggctgtatgaccaggcgaaggactgc
atgaggactacacagctactgaattccattaaggctgagtataagtgggtggggctggtg
gtgctgatgctgctgctggctgatggtgtggaggatgtggaagcgctggttttccatctg
gagagctcctcctgtcctttgtctcacactaatctctctgaactcctctgggctctctcc
acactgctgcttgccatgacacacaccggcatcaggatcagcagcaggcttcactataat
gtgttctatgtgttgtttcaaatggagaacacagctcctcctgtagaaggtagcagaggt
actggagaaaagcagctccagatgactcatgagcagcaatgtattattaaccacaacatg
cagccaagtcatgtggtcaaagttgaggcttttgcaggcacaggtaagaccaacgtgctg
atcaagttttcccaacagagaccaaatcttcgccttctgtatgttaccttcaacaatgct
gtagcaaagaaggcgagacgctggtttcccaaaaatgtagaatgcaggacgatccactcc
ttggcctacaatgctgtggggaaaaggtataacacgctgaagaaagtcacggacaaaatg
aagttattctttctgtcaaagattttgccggaggggaagagaggctacgtgaatgctaaa
gtggtcagccagactattgacaccttctgccaatccacagactcacacatcagcaccaaa
cacgtcccactcgaatacaaaaacaccaacggcttgatccaaactaccaaaccacacgag
aagcgggaatttgtcaacatagcaaaggatgtttggagcaaaataatcaaggaggagcca
cgtgaacatcatgcttactgcatcacacatgatggctaccttaaactgtggcagctccag
aagcccattttgaaacagtatgatatcatcatgattgatgaagctcaggactgttctcca
gttatcatggacatttggctttctcagccttgtgcaaagatattcgttggagatcctcac
cagcagatctatgctttcaaaggagctgtcaatgccctacacaccatttcacatacacac
ctgtactaccttacacagagtttcaggtttggctctgagattgcttacactggaactgcg
gtcctggacgcatgtaaaaaagtaaagaggagtttattgggagcagaacaagatggcagt
gtgtgtggtgatgacagtgaggtggtggacagcctaaggtcaggatcagggaagggagat
ggaagaatcgctgttttgtgtcgtaagaatgtcactgtgttcagcgaagcagctcggctt
gtccaagcaaacccagagtgcaaaattcactttattgggggagttctaaagcttaagctg
aaagacattgaagacatttggactctaaaatcaaggagacaatgggaatacgtgggctac
tcacaatcttgggaaaaccggaataggaaagaattccgtaatcccttcattcagcacttc
agcagacatggaggctttgaggctttgcaacgctatgccactgagagtgaggatgaggac
ctgacctataaactgactgtagtgaagaaatacggcacccaaatccctcatctggtcagc
tgcatcatcgccagcgcaacaaaaaacatccagcaagcagatttcatcctgggcacagtg
cacaagtcaaaaggcctcgagttccatacggtcatcatggcagacgacttcaaaacagtg
cccagagccgcatcccccctgcgggtctcactcccaagagatgttcaagaagacgagtgg
aatttgctgtacatagctgtgactcgagctaaaagaaagctgttcctcaacaaaaccatc
atcagtatcctggaaatgaaagggcactgcttcctgcagtcagggatgatcatggcggat
ccaccttttgtatgttgcgctccatacagacgaacttgtggaatggtgaatggaattgct
atgaggaagatgcctgtcacatatgtgtgtgatcaggagggttctgcagtgagttggaag
tgtgaggacggtgggttgctgtgtacatcgtgtgtaaaacggcgccttggtgtactctca
gctctgctggccattccctcatccacatcttag
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