Colossoma macropomum (tambaqui): 118803904
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Entry
118803904 CDS
T09004
Symbol
robo1
Name
(RefSeq) LOW QUALITY PROTEIN: roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118803904 (robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cmao04515
]
118803904 (robo1)
Cell adhesion molecules [BR:
cmao04515
]
Immunoglobulin superfamily
ROBO family
118803904 (robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_5
Unc5_NetrinR_N
Ig_PDGFR_d4
Ig_Rha78A_N
DUF7908
Motif
Other DBs
NCBI-GeneID:
118803904
NCBI-ProteinID:
XP_036420334
LinkDB
All DBs
Position
Unknown
AA seq
1677 aa
AA seq
DB search
MRIAWSGATAFIIITLLRLGQSVVVESSLVPDTGTAETPKEGVTQAPASGHDEDNTLGYT
GSRLRQEDYPPRIVEHPSDLIVSKGEPATLNCKAEGRPMPTVEWYKDGERVETDRDNSRS
HRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAVSHNASLEVAILRDEFRQNPS
DVMVAAGEPAVMECQPPRGHPEPTISWKKDGVNVDDRDERITIRGGKLMITNTRKSDAGK
YVCVGTNMMGERESEIAELTVLERPSFVRRPSSQSVLVDQSVEFRCEAQGDPVPTVRWRK
EDGELPKGRFEIREDHTLKLKRLSSADAGSYTCLAENMMGKAEATAALTVHVVSVPPVFA
VRPRNQVVGMGRTVTFQCEATGSPQPAIFWQREGSQNLLFSSQPPQPSSRFSVSQTGDLT
ITGVERGDAGYYSCQALNIAGSVITKALLEVTDIISDRPPPVVRQGPTNQTVAVDGTVVL
GCQATGTPTPTILWRKDGALVSTHDSRLKQLDSGALQIRYAKLGDTGMYTCIASTPSGEA
SWKAYLEVQEFGVAVQPGRPTDPNLIPSAPSKPEVTDVTRTSVSLSWKPDLNSGATPTSY
IIEAFSHASGSSWQTLAEHVRTESYVLKGLKPSAVYLFLVRAANAYGLSDPSPISDAVRT
QDIPPTSQGVEHGQIQRELGDVVIHLHNPTILSSSSIRVQWTVEQQSQYIQGYKVMYRVS
SETGQTRSDWAVFEVQSPGEHTALITQLRKGTTYDFKVRPFFNEFQGTDSDIKVGKSLEE
APSAAPRGVTVTESGDNGTAILLSWQAPPEDEQNGVVQEYRIWCLGNESRYHINRTVDGS
TFSVVISGLVPGVRYSVEVAASTGAGPGVKSDITYFQLDSSGRMTQTVADPENTLSQQIS
DVVRQPAFIAGIGAACWIILMVFSIWLYRHRKKRSGLSTSYAGIRKVPSFTFTPTVSYQR
GGEAVSSAGRPGLLNIGEPATQPWLADTWPNNCSNQNDCSINCCTAGNGNSDSNLTTYSR
PADCIANYNNQMESKPSNLLAPDSGLYGDVDLSNKINEMKTFNSPNLKDGRLGPGQPTPY
ATTQLIQSSLGSGTGGSADDKQSWKSSQGTPQKQQEVTSQLQYNIMEQNKLNKDHYRGGD
SAMPATIPYNQPPEPNPAGTYSSSDRGSSTSGSQGQKKGVRTPKLPKQSTMNWADLLPPP
PVSPPPCQDYNLSMDDSYEAELQCPVPPSRMYLQPDELEEEEAEMERGPTPPLRGTASSP
AAVSYSHQSTATLTPSPQEELQPMLQENPDSLHERRRQLVSPPAPPRPLSPPHTYGYISS
PLGLDTDGLEEEEDEEEGDETDAEVARVHQRRHQQHPAAQQHGGQQRLLLRGLEQTPASS
TCDLESSVTGSMINGWGSASEEDNASSGRSSVVSSSDGSFFTDADFAQAVAAAAEYAGLR
VAKHSGKGQQQQTVPGARKYQNLPSGHRPASPLSTDSNMSAAVAQKRPQKKQKQQAAGHS
GYQRREVYTDDLPPPPIPPPSLLKSPTHPGKAVSEGGWGAVAPRSSSAEGREKRAGPGPK
PRDASDTRTSSSERRDAQDKLRAQRAGKASKQEQSTGSKARQHPEDILPYSRPSFPAVHS
PRGDREPSSSSSMSSRGSGGRRRAEGAPGSRRNPQDIGLNTIGAFQPGEEELEMVES
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcatggtcaggagccacagcctttataatcatcacattgctacggcttggg
cagtctgtagtcgtggagagctctttggtcccagacacgggcacagcggagacgccaaaa
gagggggtcacgcaggcccccgcttcaggacatgatgaagacaacaccttgggctacaca
ggatcccgtctgcggcaggaagattacccaccccgcattgtggagcacccctctgacctg
atagtgtccaagggcgagccggccaccctcaactgcaaggccgagggccggcccatgccc
accgtggagtggtacaaggacggtgagagggtggagacggaccgggacaactcacgttcg
caccgcatgctgctgcccagtggctccctcttcttcctgagaatagtccacggccgtcgc
agcaaaccggacgagggctcgtatgtgtgcgtggcccgaaactacctcggagaagcagtc
agccacaatgcctcgctggaagtagccattctccgtgatgagttcagacagaaccccagt
gatgtgatggtggcagcgggtgaaccagcagtgatggagtgccagccccctcgcggccat
ccagagcccaccatttcctggaagaaagacggcgtcaatgtagacgacagagacgaacgc
ataacgatacgaggtgggaagctgatgatcaccaacacgcggaaaagtgacgcagggaag
tatgtttgtgtggggaccaacatgatgggcgagcgggagagcgagatcgccgagctcact
gtgctggagagacccagttttgtgcgcaggccgagcagtcagtcagtgctggtggatcag
agcgtggagttcagatgtgaagctcagggagaccctgtccccactgtccgctggagaaaa
gaggacggagagctgcccaagggcaggtttgagattcgggaggatcacactctgaagctg
aagcggctgagctcagcagatgcgggctcttacacctgcctggctgagaacatgatgggg
aaagccgaggccacagccgccctcaccgtccacgttgtgtctgtgcctccagtgtttgca
gtgcggccgaggaatcaggtagtcggcatgggacgcactgtgacctttcagtgcgaggct
actggcagcccacaaccagccatcttctggcagagagagggcagtcagaacctgctgttt
tcctctcagccgccgcagccctccagccgcttctctgtctctcagacgggtgatttgacc
atcacaggtgtggagaggggggatgccggatattacagctgccaggccctcaacatcgca
ggcagcgtgatcaccaaagccctgctggaggtcacagacatcatttcagacaggccccca
cctgtggttcgtcagggtccaaccaatcagacagtggctgttgatgggacagtagttctg
ggttgccaggcaacaggcacccccacccccaccatcctgtggagaaaggacggagcgctg
gtgtccactcatgactctcggctcaaacagctggactcgggagctctgcagatacgctat
gccaagcttggagacacaggcatgtacacgtgcatagcgtcgaccccgagtggagaggcg
tcatggaaggcttatctggaagtgcaagagtttggtgtcgcagtccagcctggccgaccc
actgaccccaacctgatccccagtgccccctccaaacccgaggtgacggacgtcactcgc
acctcagtgtctctctcctggaagcctgacctcaactctggagccacacctacttcttac
atcattgaggccttcagtcatgcgtcgggcagcagctggcagacgctggcagagcatgtg
aggacagagagctacgtgctgaagggcctgaagcccagcgctgtctatctgttcctagtg
agagctgctaatgcatacggcctgagtgaccccagccccatcagcgacgccgtcagaaca
caggacattcctccaaccagtcagggagtggaacatggtcagatccagagggagctgggg
gatgttgttatccacctccacaatcccaccatcctctcctcctcctccattcgagtgcag
tggaccgtagagcagcagtcgcagtatatccagggctataaagtgatgtaccgagtgtcc
tctgagacgggtcagacccggagcgattgggctgtatttgaggtacagtcaccaggagag
cacacagcactgatcacacagctccgcaagggcaccacctacgacttcaaagtgaggccc
tttttcaacgagttccagggcacggacagcgatatcaaagtgggcaaatcgttagaagaa
gcccccagtgcagcccccaggggagtgaccgtaacagagagtggagacaacggcacagcc
atcctgctgtcctggcaggctcctccagaggacgagcagaatggagtggtccaggagtac
aggatctggtgtttggggaatgaaagccgctaccacatcaatcgcacagtggacggctcc
acattctccgtggtcatctcgggcctggttccaggagtccgctacagtgtggaggtagcg
gccagcaccggagctggacctggagtgaagagtgacatcacctacttccagctggactcc
tcagggcggatgacgcagacagtagcagacccagagaacactctgtctcagcagatttca
gatgtggtccggcagcccgccttcatcgcaggcattggcgcggcctgctggataattctc
atggtcttcagtatctggctctaccgccaccgcaagaagaggagcggcctgagcaccagc
tatgctggcattcgcaaagtgccatctttcacctttacgcctacagtttcctatcaaaga
ggaggagaggctgttagcagtgctgggaggccaggtttgttgaacatcggtgagccggcc
actcagccctggctagcggacacatggcccaacaactgctccaaccagaacgactgcagc
atcaactgttgcactgcgggcaacggcaacagtgacagcaacctgaccacctacagccgc
ccagccgactgcatcgccaactacaacaaccagatggaaagcaagcccagcaacctgctg
gcgccagactcgggcctgtacggagacgtggacctctccaacaagatcaacgagatgaag
accttcaacagccccaacctcaaggatgggcggctagggccggggcagcccaccccctac
gccaccacccagctaatccagtccagcctgggtagcggcacagggggcagcgctgacgac
aaacagagttggaagagcagtcaagggacgcctcagaaacaacaggaagtgacatcacag
ctgcagtacaacatcatggagcagaataagctgaacaaggatcactacagaggaggggac
agtgccatgcctgccaccatcccctataaccagccccccgagcccaaccctgctggaacc
tacagcagctcggacagaggcagcagcacgtctggtagtcaagggcagaagaaaggggtg
cggacacctaaactgcctaaacagagcacaatgaactgggctgacctgctgccccctcct
cccgtcagcccacccccgtgtcaggattacaacctctccatggacgacagctatgaggcg
gagctgcagtgtcctgtccctccgtcccgtatgtacctgcagcctgatgagctggaagag
gaagaggccgagatggagcggggtcctacgccccccttgcggggaactgcctcctcacct
gccgctgtgtcctacagccaccagtccactgccacactcaccccctccccacaggaggag
ctgcagcccatgctgcaggagaacccagacagcctgcatgagcgcagacggcaattggtt
agccccccagctcccccacggcccctctcccctcctcacacatatggctacatctccagc
ccactgggcctagacacggacggcctggaggaagaggaggatgaggaggaaggtgatgaa
acagatgcggaggtggctcgggtgcaccagcggcgccaccagcagcacccagctgcccag
cagcatggtggtcagcagaggctgctcctgcgtggacttgagcagacgcctgcctccagc
acctgcgacctggagagctctgtcactggttccatgataaacggctggggctcagcgtcc
gaggaggacaatgcctcgtctggccgctccagcgtcgtcagctcctctgacggatccttt
ttcactgacgcagactttgcccaggcagtggctgccgccgcggagtacgctggcctccga
gtggcaaagcattctgggaaaggccagcagcaacagacagtgcctggagcacgaaaatac
caaaacctgccttcaggccaccgtccagcaagtccattgtctacggacagtaatatgagt
gcagctgttgcccagaaaaggcctcagaagaaacagaagcagcaggcagctggacactca
ggctaccagcgccgagaggtctacacagacgacctgcctcctccacccatcccacctcca
tccctgctaaagtctcccactcacccaggtaaagcagtatcagaaggaggatggggagca
gtggctcccaggtctagctcagctgagggcagagagaagagagcaggaccgggtccaaag
cccagagatgcctcagacacacgaaccagctcatcagaaaggcgagacgcccaggacaaa
cttagggctcagagagcggggaaagccagcaaacaagaacagagcacaggcagcaaggcc
cgccagcatccagaggacatcctgccctacagccgcccctccttcccagccgtccacagc
cctcgaggcgacagagagcctagctcttccagctctatgtcctccagaggctctgggggc
aggaggagagcagagggagcacctgggagccgcaggaacccacaagacattggcctcaac
accataggagcctttcagccaggagaagaggaactggagatggttgagagctga
DBGET
integrated database retrieval system
