Colossoma macropomum (tambaqui): 118803923
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Entry
118803923 CDS
T09004
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118803923 (prdm13)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118803923 (prdm13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
zf-C2H2_7th_ZNF462
SET
zf-C2H2_15
zf-BED
ADK_lid
Zf-C2H2_ZNF451
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
118803923
NCBI-ProteinID:
XP_036420363
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MLAPCSPPVCVCVVTDCALSAGLRFGPFPGIFRLGRFASDRREEGAKKKVRLVRGELVDE
SGRSVSEWIGLIRAARNSHEQNLEAVSDLPGGQIFYRVLREVQAGEELSVWYSSSLAQWY
HIPTTATPTHDEKGEERYICWYCWRMFRYPNTLKAHVHFHCAQARGPETLNRSPKSGDTP
GGPEPGARPSASPAFPTKDGALDMSVTSSRQHGTSSSSSSSSSSSSSSSLLLLHHVGFQP
GARSAFRPAGLSKLALSARDDDDDRIGDRERDRDRDARADGKPRPGRTLLEPSLKGGHHE
PGNAVARAFPFLPHFNHDDSTTTSTTMMTSSPSSAFKHVESRVHHAPHHPHPPHPPVSRY
PPPAPFERFSSPLDGGKPYAGGSGVGVGGLAGGDCGMPLVPFTVYGGELLYGSPCYPLRL
HLGGLLRYPDAVPYLASAPSLAPDLGQLAAAAAAGGGLDRDLVAAHAQRRLSEMMMTTAT
ADEEVMKGRGGLETSVRASTCAPGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKC
RVCFRPFGDPSNLNKHIRLHAEGNTPYRCDHCGKVLVRRRDLERHVKSRHPGQRTSTTTP
GASMKKGEEEEEEEVGRKSEEEEESDVDVCFTDEQSDHEHLPLSSHEKYLQKWVDMTVTV
SLCVTAVDGDEAQRCQNLLLFGIR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgccctgctctcccccggtgtgtgtgtgtgtggtgacggactgcgcgctctcg
gcggggctgcgcttcggccccttcccgggaatcttcagactgggccgcttcgcctcggac
aggcgcgaggagggcgctaaaaagaaggtgcgtcttgtccgcggggagctcgtggatgaa
agcggccggtcagtctcagagtggatcggactgattagagcggccagaaacagtcacgag
cagaacctggaggcagtgtccgacttacctggcggacagatattttaccgcgtgctgagg
gaggtccaggctggagaggagctgagcgtgtggtactccagcagtctggcacagtggtac
cacatacccaccactgccacccccacacacgacgagaaaggtgaagagcgctacatctgc
tggtactgctggaggatgttccgctacccaaacactctgaaggcgcacgtgcacttccac
tgcgcacaggcacgcggcccagagaccctcaaccgctcccccaagtccggggacacccca
ggaggacctgagccaggcgcgcgcccttcggcctccccagccttccccaccaaggacggc
gcgctggacatgagcgtgacctccagcaggcagcacgggacttcctcctcatcatcgtca
tcctcctcctcttcctcctcatcctcgttgctgctcctgcaccatgtgggcttccagcct
ggcgcgcgctcggccttcagacccgcaggactctccaagctcgcgctctctgcgcgagac
gacgacgacgaccgaattggagatcgagaacgagaccgggaccgcgacgcgagggctgat
gggaaaccgaggcccgggcgcaccttgctggagccctcgctcaagggcgggcaccacgag
cctggcaatgcagtggcacgtgcttttccctttctgcctcacttcaaccacgacgactcc
acgaccacttccacgacgatgatgacttcatcgccgtcgtccgctttcaagcacgtggag
agccgcgtgcaccatgctcctcaccatcctcatcctccgcatccgccagtctcgcgatat
ccgcctccagcgccttttgagcggttttcctcgcctctggatggcgggaagccgtacgct
gggggcagcggggtcggggtgggtgggctcgcgggcggcgactgcggcatgccgctggtg
ccgtttacggtctacggaggcgagctgctgtacggatcgccctgctacccgctccgcctg
cacctgggcggactgcttcgttacccggatgctgttccgtacctggccagcgcgccctcg
ctggcgcccgacctcggccaattagcggcagccgcagcggctggagggggacttgatcgc
gatctcgtagcggcgcatgcgcaacggcgcctatcggagatgatgatgacgacagcgacc
gctgatgaagaggtgatgaagggtcggggagggctcgagacgtccgtgcgcgcctccacg
tgcgccccaggcaagcccaagaagggccacctgtgcctctactgcggcaagctgtactcg
cgcaagtacgggctgaagatccacatgcgcacgcacaccggatacaagccgctgaagtgt
cgcgtgtgctttcggcccttcggcgaccccagcaacctcaacaagcatatccggctgcac
gcggagggaaacacgccctacaggtgcgaccactgcggaaaggtgctggtgcgcaggaga
gacctggagaggcacgtgaagtccaggcatccgggtcagcgcacgagcaccacgacaccc
ggcgcaagcatgaagaagggcgaggaagaggaggaggaggaggtcgggaggaagagcgag
gaggaggaggagagtgacgtggacgtgtgtttcactgatgaacagagcgatcacgaacac
ctgccactttcttcacatgagaaatatctccagaaatgggttgatatgacagtgactgtt
tctctctgtgtgactgcagttgacggggatgaagcacagagatgccagaacctgctcttg
tttggcatcagatag
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integrated database retrieval system
