Colossoma macropomum (tambaqui): 118804202
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Entry
118804202 CDS
T09004
Symbol
abca1a
Name
(RefSeq) phospholipid-transporting ATPase ABCA1a isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao02010
ABC transporters
cmao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118804202 (abca1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118804202 (abca1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmao02000
]
118804202 (abca1a)
Transporters [BR:
cmao02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
118804202 (abca1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
118804202
NCBI-ProteinID:
XP_036420653
LinkDB
All DBs
Position
Unknown
AA seq
2270 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIVWPLFIFFILISVRLHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFIDAKKILLYSQNDK
SFEGYKGLVRALRKLQRNTAAFKLKDFLRDNETLSEFLEKNATLSKHAVQQIVEADINLE
KVLIKGFGVHLRDLCNTTSLEDFVTIADHGVSQLTQHIICQASTDWLNNAESHFLSNLDF
LKPIRKDVRSDPKVVQDVSMATDRLLESLGALTVELVSMKSWRDMRNEILYLTGNVTRSP
NHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHNDSDSEPMSVYDNSSTPYCN
NMMKNLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQQLGVLRDLGGMW
EEMRPKVWNFMENSEEMDLVRTLLQNNASARFFNIKLKGTDWQVEDISRFLTKASEDTRP
PGTAYTWREVFNETDQAIQTISRFMECINLDKLEPVANEERLVNKSMRLLDDRKFWAGIV
FPDMKANSSELPPNVSYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSYLQ
DVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISGALLVLILKMGNLLPYSDPGV
VYLFLVSFAIVTIMQCFLISTIFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKV
VVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPLEEDSYSLTTSISLMLFDALLYAV
MTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGWTSPPTTNKKENAEAICIEEVPADLE
PGVYIENLVKVYRHGNKLAVDDLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIRMDLSAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEDKVKSEMDQIV
ADLGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDFDL
SLSSCHNSSSTVSYSKNSLKKEDSVSESSSDAGLGSDHESETTTIDISLISNVIFKHVPS
ARLVEDLGHEITYVLPYEAAKDGAFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DNGVDAETSDGTILPRRNRRHAFGGDHQSCLKPFTEDDSFDFNDSEGDPESRETDWLGGS
DGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPF
GKYPSLQLEPSMYEEQYTFISNDAPEDMHTGKLLGTLTDQPAYSGRCAEEGKSVGSSCPV
KEEEWALQEVSETVRDMFVTGNWSMENPSPLCECSCEKKKKMLPECPPGAGGLPPPQIKV
SSTDTLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSQALPPADEI
TDAISHIRHRFSLERGTAADRFLKSLSGFIQGLDTKNNVKVWFNNKGWHSIGAFLNVMNN
GILRASLPAGLDPAKFAIRAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPAS
FVVFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVS
STNLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELF
GSNEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGK
NLFAMAVEGVVFFFITVLIQYRFCIKARGFSAHLKPIGEEDEDVARERQRILSGGGHSDI
LELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVITNGEAY
LAGKSVLTEINEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRK
LGLVKYVDKAAGNYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNCILSII
KEGRSVVLTSHSMEECEALCTRMAIMVNGSFRCLGSVQHLKNRFGDGYTIILRVAGADPQ
LEPVMQFIEHELPGSILKEKHRNMLQYQLPSSLSSLARIFSILAKNKDELHIEDYSVSQT
TLDQVFVNFAKDQSDEDHFKDISISKNDVVVDFSQLNSFLMDEKAKETVV
NT seq
6813 nt
NT seq
+upstream
nt +downstream
nt
atggccgtctccactcagttgggtttgctgttgtggaagaacttcacctaccgacggaga
cagaccatccagctgctgattgagatcgtgtggcccctcttcatctttttcattctgata
tccgtgcgactccactatcctccgtatgagcaacatgaatgccattttcccaacaaggcc
atgccttcggcgggcactctaccatgggtgcaaggcatcatctgcaatgctaacaaccct
tgcttccgctatcccactcctggagagacgcctggggtggtgggcaacttcaacgactcc
ataatctcccggctgttcattgatgccaagaaaatcctcctttacagccaaaacgacaag
agctttgaagggtacaagggactcgtcagggcccttagaaaactgcaaaggaacactgcg
gctttcaagctgaaggactttctccgagacaatgaaaccttgtccgagttcctggagaag
aacgcaaccctgagcaaacacgctgtgcagcaaatagtggaagctgacatcaacctggag
aaggtgctgattaaaggtttcggagtgcatctgagagacctgtgcaacacaacgtcactg
gaggactttgtgaccattgctgaccacggggtgtcccagctgacccagcacatcatctgc
caggcctccacagactggctgaacaacgcagagagccacttcctatctaacctggacttt
ctgaagcccatcaggaaagacgtcaggtctgaccccaaagtcgtccaggatgtgtccatg
gcaacagataggctgctggagagcctgggagctctgactgtagagctggtgagtatgaag
agctggcgggacatgcgcaatgagatcctgtacctgacaggcaacgtcacacgctcaccc
aaccacatgtaccaggccgtgtcccgtatcgtctgcggccacccagagggtggcggcctt
aagatcaaatccctcaactggtacgaagacaacaactacaaggccctgtttggcaaccac
aatgatagcgacagcgagccaatgtccgtctacgacaattcgtccactccctactgtaac
aacatgatgaagaacctggagtccagccccatctcacgaatgatctggagggctctgaag
cctctcctgatggggaagatcctgtacacacccgacactccagccactcagaggatcata
catgaggtcaataagacgtttcagcagctcggtgtactgagagacctcggggggatgtgg
gaggaaatgagaccgaaagtgtggaacttcatggagaacagtgaggaaatggacctcgtc
cgtactctgctccagaacaacgccagtgctcggttttttaacatcaagctgaagggaaca
gactggcaagtggaggacatttccaggttcttgactaaagcctcagaggacacacgtccc
cctggtacagcatacacatggagagaagtgttcaacgagacggaccaggccatccaaacc
atctcccgcttcatggagtgcattaacctggataagttggagccagtggccaatgaggag
cggctggtaaataagtccatgcgtctgctggatgatcgcaagttctgggccggaatcgtg
tttccggacatgaaagccaactcctcagagcttccgccgaacgttagctacaagatccgc
atggatattgacaacgtggagcgcaccaacaagatcaaggacgggtactgggaccctggt
cctcgtgctgatccttttgaagatctgcgctacgtctggggcggattctcttacctgcag
gatgttattgaacatggaatcatccgggccctgacaggcagcaaggagaaaactggagtc
tacatccagcagatgccttacccgtgctatgttgatgacattttcctgcgcgtgatgagt
cgctcaatgcctctcttcatgaccctggcctggatgtactcagtggccatcatcattaag
ggcgtggtctatgagaaggaggcacgtctgaaggagaccatgaggatcatgggactggat
aacggaatcctgtggctaagctggttcattagcagcctgattcctctgctcatcagcggc
gctctgctggtcctcattcttaagatggggaacctgctgccctacagtgacccaggcgtg
gtctacctctttctggtgtcttttgccatagtgaccatcatgcagtgcttcctcatcagt
acaatattctcccgcgctaacctggccgccgcctgtgggggcatcatttacttcaccctt
tacctgccctatgttctgtgcgtggcctggcaggactatgtgggctttggtgccaaagta
gtggtgagcctcttgtcaccggtggcatttggctttggctgtgagtactttgccctgttt
gaggaacagggagtgggaattcagtggagcaacctgctctctagcccactggaggaggac
agctacagcctcacgacgtccatctccctcatgctgtttgatgctctgctctatgctgtc
atgacctggtacatcgaagctgtcttcccaggtcaatatggcattcctcggccatggtat
ttccccttcactaagtcctactggtgtggagagaaatgtggctggacttcacctccaacc
accaacaagaaggaaaatgcagaagcaatatgcattgaggaggtaccagctgatctggaa
cctggtgtctacattgagaatctggtgaaggtgtacagacatggtaacaagctggcagtg
gatgacctgactctgggcttctatgaggggcagatcacatccttcctggggcacaatgga
gcaggaaagacgaccaccatgtctattcttactggcctgttccccccgacgtctggcacg
gcctacatcatgggcaaggatatccgcatggatctgagcgccattcgtcagaatttgggc
gtgtgcccacagcacaatgtccttttcagcatgctgacagtggaagagcacatctggttc
tatgctcggctgaaaggtctttctgaggacaaggtgaagtccgagatggatcagattgta
gcagacctcggcctgcctcacaagcgcaaatcacgcaccagtcagctgtcgggtggaatg
caaagaaagttgtcggtagcactggcattcgttggaggttcgaaagtcgtgatcctggat
gaacccactgctggagtcgacccatacgcccgcaggggcatttgggatctgttgctgaag
tatcgtcaaggtcgaaccatcatcctctccacccaccacatggacgaggcagacatttta
ggcgaccgcatagccatcatctcccacgggaagctgtgctgtgtaggctcctcccttttc
ctcaagacacagctgggcactggatactatctgactctggtcaagagggactttgacctc
tcgctgagctcctgccataactccagcagcactgtttcctactccaagaacagcctcaag
aaggaggacagtgtctccgaaagcagctctgatgctggcctgggcagtgaccatgaaagt
gaaactaccaccatcgatatctccctcatctctaatgtcatcttcaagcatgtcccatct
gccagattggtagaggatctaggtcatgagatcacatatgtgttgccttatgaagcagcc
aaagacggagcctttgtggaactgttccatgagattgatgatcgcctcactgaccttggt
atctccagctatgggatctcagacacaaccctggaagagattttcctcaaagttgcagag
gacaatggagttgacgctgaaacgtcagatggcactattcttcccagaaggaaccgtaga
catgcatttggtggtgaccatcagagctgcctgaaaccattcactgaagatgatagcttt
gatttcaatgactcagaaggtgatccagaatctcgtgagacggactggttgggtggatct
gacggaaaaggctcataccaagtaaaaggctggagtctgaagagacagcagtttgtggcc
ttgctctggaaacgcttcttgtatgcccgacgctccagaaaaggattctttgctcagatc
gtgctgccggctgtgtttgtctgcattgccctggtcttcagtcttattgttccacccttt
gggaaataccccagcttacagctggagcccagcatgtatgaagagcagtacaccttcatc
agcaatgatgccccagaggacatgcacacaggcaagcttcttggaaccttaacagatcaa
ccagcctacagtggacgatgtgcagaggaaggaaagtctgtaggcagctcttgtccggtt
aaagaagaggaatgggccctgcaggaggtttctgagacagtgcgggacatgtttgtgaca
gggaactggagcatggagaacccttcacctctttgtgaatgcagctgtgaaaagaaaaag
aagatgctgccagagtgtccaccaggagcaggtggtctaccaccaccacagattaaagtc
agcagcacagacactttgcaaaatctgactggaagaaatatctcagactacttggtgaaa
acatatgcacagattattggcaaaagtttgaagaacaagatctgggtcaatgaattcagg
tatggtggattttcgttaggtgcgagaagttcacaggccctgccccctgctgatgagatc
actgatgctatctctcacatccgccatcgtttcagcttggaaaggggcactgcagctgac
aggtttctgaaaagcctatctggcttcatccaaggcctggataccaagaacaatgtcaag
gtttggttcaataacaaaggctggcatagcatcggagctttcctcaatgtgatgaacaac
ggcatcctgcgtgccagcctgcccgctggactggaccctgccaagtttgccatcagagct
tttaaccacccactaaatctaaccaaagagcagctctcacaagtggccctgatgaccacc
tctgtcgatgtcctggtatccatctgtgtcatttttgccatgtccttcgtcccggccagc
tttgtggtcttcctcatccaggagagagtgaacaaagccaagcacatgcagtttatcagt
ggagtgcagcctttcctctactggctggctaattttgtctgggatatgtgcaactacata
gtcccagcaacccttgtcatcatcatctttgtctgcttccaacaagaggcctacgtctcc
tccactaacctgcctgttctggctcttcttctgctgctctatgggtggtccataacacct
ctgatgtacccagcatcgttcttctttaagatacccagcactgcatatgtggtcctaact
agtgtcaacatcctgattggaattaatggcagtgtgtccacatttgtattggagcttttt
ggcagcaatgagattggcggcatcaatgacattttgaagaatgtattcctgatcttcccc
cacttctgtctgggccgaggactgatagatatggtgaagaaccaggctatggctgacgcc
ctggagagattcggtgagaatcggttccgttcccctctggcgtgggatatggtgggcaaa
aacctttttgctatggctgtggaaggtgtggtcttcttcttcatcactgtgctcatacag
taccgcttctgcatcaaggccaggggatttagtgctcatttaaagccaatcggtgaggaa
gatgaggatgtagccagagaaaggcaaaggatcttgagtggaggtggacacagtgacatc
ttggagctcagacagctgaccaaggtgtataaaaggaaacaaaagccagctgtggacagg
ctgtgtgtaggaattccacctggagaatgttttggcttacttggtgtaaatggtgctgga
aagacaagcaccttcaagatgctgactggtgattctgtcatcacaaatggagaggcctat
ttagctggcaagagtgtgctgacagagattaatgaggtgcatcagaacatgggttactgt
ccacaattcgacgccataaatgacctgctcactggccgagaacacttggagttttacgcc
attctgcggggagtgcctgaaaaagaagtttgtgaggtggcggagtggggcatccgtaag
ctggggctggtgaaatatgtagacaaagctgcagggaactacagtggaggaaatatgcgt
aagctctccactgccatcgctctgatcgggggtccaccagtggttttcttggatgagccc
accactggtatggaccccaaggcccggcgagcgttatggaactgcatcctcagcatcatt
aaagagggacgctccgtcgttctcacctcacacagtatggaggagtgtgaagccctctgc
actcgcatggccattatggtcaatggcagtttccgctgcctgggcagtgtccaacactta
aaaaacaggtttggcgacggctacaccataatcctccgggtcgcaggggccgacccacag
ctggagccggtgatgcagttcattgagcatgagctgcctggcagcattctgaaggagaaa
cacaggaacatgttgcagtaccagctgccttcctcactgtcttctctagcacgaatcttc
agcatcctcgccaagaacaaagacgagctccatatcgaggactactccgtctctcagacc
acattagaccaagtattcgtcaattttgccaaggaccaaagtgacgaggaccactttaaa
gacatttccataagcaagaatgatgtggtggtggacttttctcaactcaactctttcctc
atggacgaaaaagccaaggagacagtggtgtga
DBGET
integrated database retrieval system
