KEGG   Colossoma macropomum (tambaqui): 118804204
Entry
118804204         CDS       T09004                                 
Symbol
smu1b
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cmao  Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmao03041]
    118804204 (smu1b)
Spliceosome [BR:cmao03041]
 Complex B
  Other components
   Complex B specific factors
    118804204 (smu1b)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WDR55 EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_EML LisH_TPL Beta-prop_WDR90_POC16_2nd Beta-prop_ACSF4 NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_WDR41 WD40_RFWD3 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_WDR75_2nd Beta-prop_IP5PC_F Beta-prop_DCAF12 eIF2A Cytochrom_D1 Beta-prop_WDR35_TULP_N WD_LRWD1 PEP5_VPS11_N BBS2_Mid CoA_transf_3 VPS8_N PROPPIN LisH_PAC1 LisH Beta-prop_BBS7 Beta-prop_RSE1_2nd DUF7165 LisH_WDR26 DUF1057
Other DBs
NCBI-GeneID: 118804204
NCBI-ProteinID: XP_036420657
LinkDB
Position
Unknown
AA seq 539 aa
MELDVETADVIRLIMQYLKENNLHRTLAALQEETTVSLHTVDSIESFIADINDGHWDVVL
LAIQYLKLPDKLLIDLYEQVVLELTELKELGAARYLLTQTDPMIMLKHTQPERYSKLETL
LTSPHFDANEAYQEGSSKEKRRQAIAQALTEEVSVVPPSRLMALLGQGRICEGALYRLQE
TKALRQFGSLALLSLKWQQHQGLLPPGMSIDLFRGKAMMKDLEEERFPTQLCRLIKFGPK
SHVECARFSPDGQYLITGSVDGFIEVWDFTTGKISKDLKYQDQDNFMMMGEAVLCLAVSH
DTEMVASGAQDGKIQLWRIHNGQCLRKFERAHSEAVTCICFSKDNSQLLSASFDHTIRLH
GLKSGKMLKEFRGHTSCINDIAFSHNGHYIISASADGTVKIWNAKTTDCTNTIKTPDVPE
GADITVNSVVLVPRNPEHFVVCNRTNTVVVMNIHGQVLRSFSSGVREGGDFVCCTLSPRG
EWIYCVGEDYMLYSFSTITGKLERTLTVHEKDVIGITHHPHQNLIATYSEDGLLKLWKP
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggagctggacgtggagaccgcagacgtgatccgcctgatcatgcagtacctgaaggag
aacaatctgcaccgcacgctggcagccctgcaggaggagaccaccgtgtccctgcacacc
gtggacagcatcgagagcttcatcgcggacattaacgacggccactgggacgtggtgctg
ctcgccatccagtacctcaaactgccggataagctgctgattgatctgtacgagcaggtg
gtgctggagctgactgagctaaaagagctgggagcagcccgttatttactgacccaaaca
gaccccatgatcatgctgaagcacactcagcctgagcgctactccaagctggaaaccctc
ctcacgagcccgcactttgatgcaaatgaggcttaccaagagggcagcagtaaagagaaa
cgcaggcaagctatcgctcaggcgctgactgaagaggtcagcgtggtcccaccctctcgt
ctcatggctctgcttggacagggtcgtatatgtgagggcgccctctacaggttacaggag
accaaagcgctcagacagtttggatcattagcattgttgtctctgaaatggcagcagcac
cagggtctcctgcctcccggcatgtcaatagacctgttccggggcaaagccatgatgaag
gacttggaagaggagcgcttccctactcagctctgccgcctcattaagtttggtccaaag
tcccacgtggaatgtgcccggttctccccagatggccagtacctgatcacgggatctgtc
gatggcttcattgaggtttgggatttcaccactggtaaaatatccaaggatctaaagtac
caggatcaggataacttcatgatgatgggggaggctgtgctgtgtctggcagtgagtcac
gacactgagatggtggcctccggagcccaggacggcaaaatacagctatggaggatccac
aatggacaatgcctgcgcaaatttgaacgagcccacagcgaggccgtcacctgcatctgc
ttcagcaaggacaacagtcagctactgagtgcctcctttgaccacaccatcagacttcac
ggactgaaatcaggaaagatgctgaaggagttccgaggccacacgtcctgcataaacgat
attgccttctcgcacaatggccattacatcatcagcgcttcggcggacggcaccgtcaag
atctggaacgcaaaaacgactgactgcaccaacaccatcaaaacgccagacgtccccgag
ggagcagacatcacagtaaacagcgttgttctcgtgcccagaaacccagagcactttgtg
gtgtgtaacaggaccaatacggtggtagtcatgaacatccacggccaggtgctgaggagt
ttcagttcaggcgtgagagaggggggagacttcgtgtgctgcacactgtctcctcgcggg
gagtggatctactgcgtgggagaagactatatgctctattcgttcagcaccatcaccggc
aaactggagagaactctcacggtgcatgagaaagatgtgatcggcataacccaccaccct
catcagaaccttatcgccacctacagcgaggacggcctgctgaagctctggaaaccctga

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