Colossoma macropomum (tambaqui): 118804348
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Entry
118804348 CDS
T09004
Symbol
vps8
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118804348 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118804348 (vps8)
Membrane trafficking [BR:
cmao04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118804348 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Clathrin
TPR_VPS8_2
WD40_CDC20-Fz
zf-RING_Vps41
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-RING_11
zf_RING_Vps8_fungal
zf-C3HC4
ANAPC4_WD40
PHD_4
EIF3I
Beta-prop_HPS5
zf-C3H2C3
WDR55
Motif
Other DBs
NCBI-GeneID:
118804348
NCBI-ProteinID:
XP_036420730
LinkDB
All DBs
Position
Unknown
AA seq
1421 aa
AA seq
DB search
MSESPDTRSLVSASSQANLMEIDAIDDKEFDIPQVDTPPTLESILNEPEDEDEPFILEDT
CLLNTENIDAHSCETSSLASSDSGDRAHLKRRRKAVETNATVHGSVLKHSVLKGISAQIV
SAADKVDAGLPTAITVSSVIAVGTSHGLALVFGKDQNQALRLCLGTTATGAEYGAVSALS
INHDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHIKFTDLPTLAVCNDSGG
SVFELSFRRVMGMRTCESRCLFSGSKGEVCCVEPLHSGPELKDHPITHYCLLAMASLTKI
LVIGLKPSLKVWMTFPYGKTDPASVPQLAWQFVAVQKAVNPILAFCRGDTVHFLLVKKDE
SGTVHVIKQRQLQLSCDLISLTWLNSRTLVLMDSGEKLHVFDRPSQEELETLDLSDVQLV
YNSSHFKSLATGGNVSQALALVGEKACYQSVCSYGGQIVYLGTKSVHVMTLRNWRERVDH
LLKQEKFTEALSLAWSFHEGTAKAVLGLFGDPVKRKGVVADKMVEILFQYVERSLKKCPE
QGKIQVLEQHFQDMVPVVVDYCLLLQRTDLLFNQIYSRLAENSVAKGVFLESLEPYILSE
RIGCLTAPVMRDLLSYFQENGMMESVEGCLVHMDITNLDIQQVVQMCWDNQLYDAMIYVF
NSGMNDYISPMEKLFQVIGPPLHEGKPLTDEQVVMGNKLLVYISCCLAGRAYPLGDIPED
LVPQVKNQVFEFLIRLHSVEATQEEEVYPYIRTLLHFDTREFLNVLALTFEDFKNDKQAL
EYQQRIVDILLKVMVDNSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSP
DDDCRHTERQQVLLELLQVGGVVQFDEGRLLALAEKAEFYQICEFMYEQKHLYDQIIDCY
LKDPLRKEEVYNYIHNILSMPGYSPEEKQTAWNKSLQHVKELVSINPAKAAELVAGHFSS
EVEPIITALQDDYLVFQFLKNLLDPSEGHAPQAVPKLGPELYELLVDLLCRFNPRQVTAF
LQTSQHYRLEETIEITKQHQLHEATAYLLEKKGDVQGAFQVLLQMLKDKLHAVTQEPSQP
FGQKAEEEESEMGGEEQTPLARVEEALNDIISLCHRSSHGLNQQQREALWFPLLEAMMSP
QKLLKGPDAKHTSEALKELTMKVLNSMSSFIALPAIIQRILQDPVYGKGKLAEIQGLILG
MLETFNYEQTLLETTTSLLNSDLHWSLAHLRKAVSRGLHPRQDHCNICLQQYKRRQESEE
EVIIFSCGHLYHCQCLQRKEQGVMGKEPGHMGDRVHSWSCYKCTSSQNARPGDRVTAEGG
RARSTSLAQTKVTSAHRGSAAEARGRKELTEVTLDAQQTQAWDQLRCMYKGPSRLSILTE
ISHCHSNEKAGLLNPTHPGTGSIYHSENFSLKLSPPPLVEE
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtctccggacactcgcagtctcgtgtctgcgtcctcgcaggccaatctaatg
gaaatagacgcgattgacgacaaggagtttgacatccctcaagtggacacgccgccaact
ctggagagtattctgaatgagcctgaggatgaggatgaacccttcatcctggaggacacc
tgcctgctgaacacggaaaacattgacgctcattcctgcgagacctcctctctcgccagc
tctgacagcggagacagagcacacctgaaaaggaggaggaaagcagtagagactaatgct
acagttcatggatcggttctgaaacacagtgtgctgaaaggcatttcagctcagattgtc
tctgctgctgacaaagtggatgcaggcttaccaacggctatcactgtgtccagtgtcatc
gctgtgggaacgtctcatggcctggccctcgtgtttggaaaagatcagaaccaggcgctg
aggctgtgtctgggtaccacagcgacgggggctgagtatggcgctgtgtcggccctcagt
attaaccacgactgcacacggctgctgtgtggcttcgctaaaggacagatcaccatgtgg
gacttggccaacgggaagctgctgcgcaccatcacagacgcccacccacctgggacggcc
attttacacatcaagttcacagatctcccaacactagctgtgtgcaacgacagcggtggc
tctgtgtttgaactttcattcaggagagtgatggggatgaggacgtgtgagtctcggtgt
ttgttcagtggcagcaagggtgaggtgtgctgtgtggagccgcttcattcaggccccgag
cttaaagaccatccaatcactcactactgccttctagccatggcttcactcaccaagatt
ttggtgatcggactgaagccttctctaaaggtctggatgacttttccatatggcaagact
gatcctgccagcgtgcctcagttagcatggcagtttgtggccgtgcagaaagcagtgaac
cccattctagccttctgcagaggggacaccgtccacttcctactggtgaagaaggatgaa
tctggaacagtccatgtcatcaaacagcgacagctccagctcagctgtgacctcatcagt
ctgacatggctgaactcgcgcacactggtgctgatggacagcggggagaagctgcatgtt
tttgatcggcccagtcaggaggagctagagacgctggatctgtcggacgtccagctggtc
tataacagcagccacttcaaatccctcgccacgggaggcaatgtcagccaggcactggct
ttggtaggggagaaggcatgttaccagtctgtgtgcagctatggtggccagatcgtctac
ctaggaacgaagtccgtccatgttatgacccttagaaactggcgtgagcgtgtggatcat
ttactaaagcaggagaagtttacagaggcgctctctctagcctggtcattccacgagggc
acagccaaagccgtactgggcttattcggggatcctgtgaagaggaagggagtggtggct
gataagatggtggagattttgttccagtacgtagagcgttctttgaagaaatgtcccgaa
caggggaagatccaggtgctggagcagcacttccaggacatggttcctgtcgtggtggat
tactgtctgctcctgcagaggacggacctgctgtttaaccagatctactcgaggctggcg
gagaactcggtggctaagggtgtgtttctagagagtttagagccgtacattctgagtgag
cggattggctgcctgactgctccagtcatgcgggaccttcttagttacttccaggagaac
ggcatgatggagagtgtggagggctgcctggtgcacatggacatcactaacctggatata
cagcaggtggtccagatgtgttgggataaccagctctatgatgccatgatctatgtcttc
aacagtggcatgaacgactacatcagccccatggagaaactctttcaggtgattggtcct
cctctgcatgaaggaaagcctctcacagatgaacaggtcgtcatgggaaataagctactt
gtctacattagttgttgtctggctggacgtgcctatcctttaggggacattccagaagac
ctggtacctcaagtcaaaaaccaggtgtttgagttcctgattcgcttgcattcagtggag
gccactcaggaggaggaggtgtatccgtacatccggacactgctgcacttcgacacacgt
gaattcctcaacgtcttggctctgacgtttgaagactttaagaatgacaaacaggctcta
gagtaccagcagaggattgtggatattttactgaaggtgatggtggataactcggacttc
accccgtctcaggtgggctgcttgttcaccttcctcgcccgccagctggccaaacctgac
aatacccttttcgtcaacaggaagctgttcgatcaggtcttggagttcctctgcagtcca
gatgatgattgccgacacacagagagacaacaggtgctgttggagttacttcaggtggga
ggtgtggtccagtttgacgaggggcggctccttgctttggcggagaaggcggagttttat
cagatatgtgagtttatgtatgaacagaagcacctgtatgatcaaattattgactgctac
ctgaaggatcctctgagaaaggaggaggtttataactacattcataacatcctgtccatg
cctggctacagcccagaggagaagcagaccgcatggaacaaatccctacagcatgtgaag
gagctggttagcattaatccagctaaagcagccgagctggtggctggacacttctccagt
gaggtggagcctattatcactgcactacaggatgattatttggtgttccagttcctgaag
aacctgctggatccaagtgaaggtcatgctccccaggctgtgccgaagcttggtccggag
ctgtatgagctgttggtggacttgctgtgccgttttaaccctcgccaggtcacagccttc
ctccagacctcccagcactaccgcctggaggaaaccatagaaatcaccaagcagcatcag
ttacatgaggccactgcctacctgctggagaaaaagggggacgtccaaggagccttccag
gtcctgctgcagatgctgaaggacaagctgcacgcagtcactcaagagccttcacaacct
ttcgggcagaaggctgaggaagaggagagtgaaatggggggtgaagaacaaacgccactg
gccagagtagaggaagcactgaatgacatcatcagtctgtgccacaggagctcacacgga
ctcaaccaacagcagagagaggctctgtggtttcctctgctggaggccatgatgtctcca
cagaaactcctcaaaggccctgacgccaagcacacttctgaggcactgaaggagctcact
atgaaggtgttaaacagcatgtccagcttcattgccctgcctgccatcatccagcgcatt
ctacaggaccctgtgtatggaaaagggaagctggcagagatccagggcctcattcttggg
atgttggagactttcaactatgaacagaccctcttagaaaccactaccagtctgctgaac
tcggacctgcactggtctctggcgcacctgcgtaaagccgtcagcagggggctccacccc
agacaggaccactgcaatatctgcctgcagcagtacaagagacggcaggagagcgaagag
gaggtcatcatcttcagctgtggtcacttgtatcactgccagtgtctgcagcggaaggag
caaggggttatgggtaaggagccggggcatatgggagatcgtgttcactcgtggagctgt
tacaaatgcacctccagccagaacgctcggccaggggaccgggtcactgctgagggtggg
agagccagatccacctctttagcacagaccaaagtgacgtccgcacatcgggggagcgca
gctgaggctcgtgggaggaaggagctgactgaggtgacattagatgcccagcagacgcag
gcctgggatcagctccgctgcatgtacaaaggaccatccagattgtctatcctcacagaa
atctcccattgccatagcaacgagaaggcggggctgctgaaccccacccatccgggaaca
ggaagcatctaccacagtgaaaacttcagtctcaagctttcccctccgccgctagtggaa
gagtag
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integrated database retrieval system
