Colossoma macropomum (tambaqui): 118804510
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Entry
118804510 CDS
T09004
Symbol
si:dkey-46g23.1
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmao03019
]
118804510 (si:dkey-46g23.1)
03036 Chromosome and associated proteins [BR:
cmao03036
]
118804510 (si:dkey-46g23.1)
Messenger RNA biogenesis [BR:
cmao03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118804510 (si:dkey-46g23.1)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118804510 (si:dkey-46g23.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
118804510
NCBI-ProteinID:
XP_036420887
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MEDLKSTREEQSRQEVSHTDTEQTFKELTSPPLAQSPTPLNCVSQRSSSSSASAPCPGPG
GPAAPLAGGNNAKRNTVANGQPPSGASARFMPREVPPRFRNQQEPKVLLKRGQPLVGGAT
GDASSPVQTGELLNANTVHCSDPDVDPASPLSSLSSATSTYANSTWGPGSGALPLSQGMD
KAVVVDGSDLEAWPKISEGRRQEEPLAQSSSASWGQGMQDSELGISDLGGSFTPGEYATG
SRMWGPSSEADAVDRSFSSEVLSPAGVEEEPQGSSSDLSPGCSPADWLDSKDVMTADSKS
VHTASHTSLSPGSVQQQTQAQDRVGCGDNRLEQEAGPKQANVAEDSEDVDCIGTNEVLQL
PASKESNPAASRTDGWGSVADAEGKSGGMWSASGESREGWGSGGNGKDGGICGVSQGAWG
DEAGELNKQAATAWPAGGTSGSAKESFAGSLQDSQMLATNTMALDNQKVGADEWEGSECD
SAGHESSEDAQKQHSSDLSRARATHTEVALQSMLNRSDLDPRVLCNSGWGQTQIKQSVAW
DLEADSGSGWTERANANANTNSSNLLQRSGPSEGNQVRGGRSQGWGGEGSGWGEPREERW
VEKDGEWRSRPEQGTLSSRWGEAVEDERVGRWGENRRERGGWEQGSGSGGDWGQGDNEWG
VERGVKQGSQDEGSWGSSEEERRRGWGVKEVDTGVRQNQAWGGTQIPNNQTALKGPNQQQ
PQQSQSQTAQSRGQQDSRARPAGPQPQTQNQSPGWTSGPIPQVSAAVEPSGWEEPSPQSI
SRKMEIDDGTAAWGDPSHYDSKSVNMWDKSGTPQQRGQPTRPAATTPASRDKNTAWDCGG
PPEQGVDNGTAGWGKTFEAPSGWRDSEDSGKGAGWGSSHSNPVKPGPKSVQDSWGDEGSN
SSRHGSWEEDDSGPGMWGSRGSQGGSSFTTGGWGQGQGGKRTGGKGPLKGNSGDSWTGPM
TRQFSNMGIADDEAGSAPDRPRRGMNDFNGEMRKGGRGAGFRSQSSKDMGPGETGPYFDK
MGGHGVFGAGGGIAQLRGMQPGVHPMNPSPGIRAQVPHQFLPPQVSGSMLKPIAPPSGSM
FPPQLSPQHIAMLSGIHPQMQQFQLACQLLLQQQQQQQQQQHFLSQRKFPPPLRQQHDPQ
QLARIMAILQQQRQQQGVGGAKLSPSHLGGPAPKQPDGPLLHPAMGGSLADLHPKTPTAF
TAGFGSGVELESVMGGSVGGLKEAGGSQSRFKWMMEAGHPLAPSPPDPMLHKNGLMPGPM
KLRGDSPYSQYDLLGTENLGMAQSLTDSWHRTPGGKLGTTPGTPTWPPEFQPGVPWKGVQ
SPDPDPDPDPYMTPSGMLASPALSDTDHQLLQDNTESNPTLNTLLPSPGAWPYSASENPL
TTHNSAKFSEFKSSWPPEPTGHSKSWRTNRNSSHLPRPPPGLTNQKQPSSSPWSGAGPRM
PRGWGTGGRSQDSPFETAWSGGSSAGSSWLLLSNLTPQIDGSTLRTICLQHGPLMTFHLG
LTQGSALIRYCSPHEAAKAQTALHMCVLGNTTILAEFVSEEEVARYFTHSQSSGVAGSPE
GSTASEPAVREGERERERSAVGAGAGGVVGDAGGGEAAAPWQGLDVSGPLTGSPAMEGPG
LALFSQWSSSGAEGQGGGVWGGVTPGYHGSSLWGAPQMEDSPSGLLPGDLLGGGADPL
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atggaagacctcaaaagtacaagagaagaacaaagtcgtcaggaggtttctcacacggac
actgaacagacatttaaagaactgacttctcctccactggcccagtcccctacccccctc
aactgtgtatctcaacgctccagttcctcttcagcctcggccccttgtcctggtcctggg
ggtcctgcagcaccccttgcgggtgggaacaatgcaaagcggaacactgtggccaacgga
cagcccccctccggagcatctgcacggttcatgccacgtgaagtgccccctcgcttccgt
aaccagcaggagcccaaagttttgctgaagaggggtcagccactagtgggtggggccaca
ggggatgcttcgtcacccgtccagacgggggagctattaaatgcaaatacagtgcactgc
tcagatcctgacgtagatcctgcttctcctctctcgtctctgtcctctgccacttcgact
tatgcaaattccacatgggggccgggctcaggagccctgcccctctctcagggaatggat
aaggctgtagtagtggacggctctgatttggaggcgtggcccaagatttcagaaggcagg
agacaggaagagcctttagcccagagcagcagtgcctcgtggggtcagggcatgcaagac
agcgaactagggattagtgacttgggtgggtcttttacccctggtgaatatgcaacaggc
agcaggatgtgggggccatcttctgaggctgatgcagtagatcggtccttcagttctgaa
gtgctgtcccctgctggagtggaggaggaaccacaaggttccagcagtgatttgagtcca
ggatgcagccctgcagactggcttgacagcaaagatgtcatgacagctgactcaaagtca
gtccatactgcctcccacacttccttaagtccaggcagtgtgcagcagcaaacccaggcc
caggacagagttggatgtggagacaacaggctggaacaagaggcaggaccaaaacaagca
aatgttgctgaagattctgaggatgtggactgcatagggacaaatgaggtgttacagctt
cctgcttccaaggaatcaaatccagcagcctcaaggactgatgggtggggcagtgtggca
gatgcagaggggaagagtggaggcatgtggagtgcatctggagagagccgggagggttgg
ggaagtggaggtaatggtaaagatggaggcatctgtggggtatctcagggagcatggggt
gatgaggcaggtgaactaaacaagcaggcagctacagcttggccagcaggaggcaccagc
gggagcgcaaaagaaagctttgcaggtagtttacaagactctcaaatgcttgcaaccaac
acaatggcattggataatcagaaagtaggggcggacgaatgggagggttctgagtgcgat
tctgccggtcatgaaagcagcgaggatgcacagaagcagcacagctcagacctctccaga
gcacgagccacccacactgaagtggccttacagagcatgcttaatcggagtgatctggat
cccagggtgctttgcaacagcggctggggacaaacccagatcaagcagagcgtagcctgg
gatctagaggcggacagtgggtcaggctggactgagcgtgctaatgctaacgctaacaca
aacagctctaacctgcttcagaggtctgggccctcggagggtaaccaggtgagggggggt
agaagccagggatggggaggtgaagggagtggatggggggaaccaagagaggaaagatgg
gttgaaaaagacggagagtggcgcagtcgtccagaacagggtactttatccagcagatgg
ggcgaagctgtggaagacgaacgagtggggaggtggggtgagaacaggagggagagaggg
gggtgggagcaggggagtggaagtggaggagattggggacagggggacaacgagtggggt
gtggaaaggggggttaagcaaggcagtcaggatgaggggtcctggggcagttctgaggaa
gaaaggcggagagggtggggagtgaaggaagtggacactggagttagacaaaaccaagcc
tggggggggacacaaataccaaacaaccaaacagcactgaaaggcccaaatcagcagcag
ccacaacaatcccagtcccagactgcacaatcgagaggccagcaggactccagggctcga
cccgcagggcctcagcctcagacccagaaccaaagcccaggatggacatccggccccatc
cctcaagtgtctgctgcagtggagcctagtggctgggaggagccttcgccccagtctatc
agcaggaagatggaaatagatgatggcacggcagcctggggcgacccatcccactatgac
agcaagagtgtcaacatgtgggacaagagcggcaccccacagcagaggggtcagcccacc
aggccagctgccaccacaccagccagcagagacaaaaatacagcatgggattgtggaggt
cctccagagcagggtgtggacaacggcacagcaggctgggggaagacatttgaggcccca
tcaggctggagggattcagaggattctggaaaaggggcaggatggggcagctcccattct
aatccagtcaagcctggtccaaagtctgtgcaagatagctggggtgatgaaggctcaaat
agctcacgccatggcagctgggaggaggatgacagtggtcctggcatgtggggcagcaga
gggtcccagggcggttcctcctttactactggaggctggggccaaggccaggggggcaag
agaactggtgggaagggtcctctgaaagggaatagcggggattcctggacgggccctatg
actaggcagttttcgaacatggggattgcggatgatgaggctggcagtgccccagacagg
cccagaagagggatgaatgactttaatggcgagatgaggaagggaggaagaggagcgggg
ttccgctcacagagctccaaagacatgggccctggggagacggggccctattttgataag
atgggaggtcacggtgtatttggtgctggtggtggaattgctcagttaagaggaatgcag
cctggtgttcaccccatgaatccctctcctggaattcgagcacaagtgcctcatcagttc
ctgccgcctcaggtttcaggatccatgctgaagccgattgcaccccccagtggaagcatg
ttccctccacagctctcccctcagcacatagccatgctcagtggcattcacccacagatg
cagcagtttcagctggcgtgtcagctgctcttgcagcagcagcaacagcagcagcagcag
caacatttcctgtctcaaaggaagttccctccacctctgcgtcaacaacatgacccacag
cagttggcccgaatcatggctatccttcagcagcagagacagcagcagggtgtagggggt
gctaaactctccccttcccacctcggaggtcctgcgcccaagcagcctgatgggcccctt
ctccacccagcaatgggagggtctttggctgatctgcaccctaaaacccccactgccttc
actgcaggctttggctcaggggtggagctagagtcagtgatgggtgggtctgtaggtggt
ctgaaggaagcaggtggttcacagtcacgctttaaatggatgatggaggctggacacccc
ctagccccttcccccccagatcccatgctgcacaagaacggtctcatgcctgggcccatg
aagctgcggggcgactccccatattctcagtatgatctgttggggacagagaatctgggt
atggctcaaagtctgactgacagttggcatagaacgcctgggggcaaactgggcactaca
cctggcacccccacctggccaccagagttccagccaggtgtgccttggaagggcgttcag
agccccgaccctgaccctgaccccgacccatacatgacccccagcggcatgctggcatca
cccgctctcagtgatactgaccaccagctactgcaggacaacacagagtcaaaccccacc
ctgaacaccttactgccttcacctggtgcctggccctacagtgcctcagagaaccccctt
accacacacaactcggctaaattctcggagttcaagtccagctggccccctgagccaact
ggacacagcaagtcatggaggaccaatcgaaacagctcccacctgccacgcccccctcca
ggtctgaccaatcagaagcagccgtcctcgtccccatggtcaggggcagggcctcgaatg
ccaagagggtggggcacagggggacggagccaggactcaccttttgaaactgcatggagt
ggtggttcatctgcaggaagctcctggctactactgagcaacctcaccccccagattgac
ggctccactctgaggacaatttgtcttcagcacggtccattgatgacctttcaccttggc
ctgactcagggcagtgctctgattcgctactgcagcccacacgaggcagccaaggcccag
actgcactgcacatgtgtgtcctggggaacaccactatcctggctgagtttgtgagtgag
gaggaagttgcgcgttactttacacattcccagagctccggggtggcggggtcacctgaa
ggttcgactgcctctgagccagccgtgcgagagggagagagagagagggagcggagtgca
gtaggagcaggagcaggaggagtagtgggagatgcaggtggaggcgaggctgcagcaccc
tggcagggccttgacgtttcaggccctttgacgggcagcccagccatggaaggacccgga
ctggccctctttagccagtggagcagcagtggggcagaggggcaggggggtggagtctgg
gggggagtaacccccggttatcatggcagcagtctttggggtgctcctcagatggaggac
agcccatcaggcctgttgccaggcgacctgttaggaggcggtgccgaccctctgtga
DBGET
integrated database retrieval system
