Colossoma macropomum (tambaqui): 118804521
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Entry
118804521 CDS
T09004
Symbol
frem2b
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 2b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118804521 (frem2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cmao04091
]
118804521 (frem2b)
Lectins [BR:
cmao04091
]
C-Type lectins
Lecticans
118804521 (frem2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Cadherin_4
Big_9
TMEM154
TM_ErbB1
DUF6479
Ig_SibA
Motif
Other DBs
NCBI-GeneID:
118804521
NCBI-ProteinID:
XP_036420912
LinkDB
All DBs
Position
Unknown
AA seq
3118 aa
AA seq
DB search
MFSPACEMRLSGGSCFTCFFVLALTLTDGSSAQLFDSFGLSYGLRSELSEDAILVANNGI
RVPFGRSVFVDPVNDLVIQVQPGDKCTLTVLDNDPLSQRPGQLSPKKFPCEFGPNDVKYS
HFGSRSPSRDRVRLQLRYDTQSHTVIIPFMMEVEVIFTQLEILTKNMPLVVEKLLGISNP
IDRKILEFTYDRNTYQCKVTSLASVSALPRYGKLIDEGKLGKMIDCDEFVRLNVRYQHTF
AHRSPNRDYIPMYVELQDKESNVIRQEFFQIMVRIKEGEENTAPKPSFVAMMMMEVDQFV
MTAITPDMLAAEDVESPPDDLIFNITSPLSFEEGYIVSTDDRNLPITSFYQGDLKDLKIA
YKPPSVDSDSERIFQIEFVVVDTEGAVSDPFAFMIVVKPMNTLAPVVTRNTGQLLYEGQS
RPLSSLQNLQISDEDNLDDVKVTVIDGLRHGELTVLGSRRKFFTPADLDLGSVIYQHDGS
DTYSDNIIFRMTDGRHEVEFLFPITVVPTDDEPPIINANTGLVLFKNQMMPISALMLSAA
DIDSEDSTIKFIMEPPFSTIGEVLLRQSDAPEDPSTWRFNSEDEMYEKAVTEWLQQDITD
GKLFYRHIGPHNTEAVMDQFVFRVQDDNDPPNQSGESSFIIKILPIDDLPPKLYPGTTLQ
LTVHEYQLTYFRKKFLRYTDLDSEDRDLKYTITQPPTDTDTNSPGILGTIVLTESPNMEV
TEFTQAQINHHKISYKPPDLELGITPHVVQFQYTVEDTAGNSVDGTFTIFLQPVDNKPPQ
ITNTGFTVLERGTHVITYSELHTTDPDTDSKRISFTLTQPPTHGQLQYTFTILTKGDLFN
LDDISNGRISYVHNGDESTNDFFQLDVSDGIHIVTITIRITVKPVDDEVPTISLPEGTIG
SYIDVLENGATEITTNVIQGRDEDTDDLRLTFIVEDPPVFGEILVNGVPSNRFTQADIIS
GLVVYAHTSGEIGLTTKEDFFNLTLTDMSDEWTVGGNKIKGVRVQVTILPIDSQAPEVFV
GPQFSVIEGEKNAIQILHISADDIDTPNDDLLCTIIVQPTSGYLENISPAPGSEKSRSGI
AISAFTIKDIKQNHIYYVQSIHRGVEPVEDRFTFRCSDGINFSERHFFPIVIIPSNDEKP
EIHMREFVVMEGMNVVIDTPILNGLDADIPTDELTFIITKPPKHGFILNQLTSGTVPVTN
FTLDQIREASSIVYEHDDSETTDDSFTVLLTDGKFTVEKTVIIMVIPVDDETPRMAINDG
LEIEIGDIKEINNKVLKATDLDSEDSTLTYVIRYGPNQGILQRRTPLGTLENITIGMNFT
QNDVDQGLILYIHNGQEGIRDLIKFDVTDGINPLIDRYFYVTVGGIDMVFPDVVSKGVSL
KEGGRVTLTTDLLSTSDLNSPDEHLVFTITRAPMRGHLECTDRPGMPITSFTQLQLAGNK
VYYIHTADDEVKMDSFEFEVTDGYNPVFRTFRISITDVDNKKPVVTIHGLVVNEGKTKLI
TPFELTVEDRDTVDRFLKFTITQVPVHGKLLFNNTRPVTTFTKQDLNENMISYKHDGTES
ASDSFSFTVTDGTHTDFYVFPDTVFETRKPQVMKITILSVDNGVPQIVVNKGGTMLRTLP
TGHLGFLITSKALKAEDRDSHHGAVTFRVTVGAEHGYLIDLGKGNATITTFTQADIDDMH
VCYVLRDGNNATSDTFYFSIEDNGGNKLKNQQFRLTWAWISLEKEYYLVDEEAKVQEVVL
KRRGYLGETSFVSIGTKDGTAEKDKDFRGKAQKQVQFNPGQTSATWKVRILSDNLYEQSE
TFQIVLSEPVMGALEFPQAATVEIVDPGDESTVFIPSATYSIEEDIGELLIPVRRSGDVS
QELMVICFTQQGTATGTVPTTVLSYSDYISRPEEHSSVLRFDRDETEKACRVVVIDDSLY
EPEESFNVTLSMPMGGRLGQEFHTTRVTILPDSDDAPVFYFGDVQYHVDESDGYVEVRVW
RTGSDLSKTGTVTVRSRKTDPVSAEAGEDYVGISKNLDFAPGVTMQTFRVTILDDLGQPV
LEGPEKFELVLRMPMNGILGEPGKSTIFINDSVSDLPKVQFRDVTYTGNENDGKITAIIY
RSGDLSYRSSVRCYSRQGSAQVMMDFNERPNTDASIITFLPGEVEKPCTLILVDDTEHEE
VEELRLVLGSPKSESPFGASIGAQNETLIKIKDDADKAIIRFGATKFSVSEPTESGQVSV
VKIPVQRVGDTSKVSVVRVHTKDGSASSGEDYHPVSEDIEFEEGETEHTVEIEILYDGLR
EMREAFTVHLKPDENMVAEIQMTKAIVYIEEMNSMADVTFPAVPVVISLLQYDDTSSARD
SQPAAGYPVVCVTACNPKYPDFDRTGSICAGEHINDTLTRYRWLVSAPTGLDGVTSPMRE
VDFDTFFTSSKSITLDSVYFQAGSRVQCAARAVNSNGDEGLELSSSIVSISVEEGLCQPR
VLGAVGAEPFSAKLRYTGPEDLDHPNLIKLTVTMPHIDGMLPVVSTRPLSNFELTLSPDG
TRVGNHRCSNLLDYNEVRTRHGFITESTRNPEAIGGTAPYQYSATLRGQSTLRFYRNLHL
EACLWEFVSYYDMSELLSDCGGTIGTDGQVLNLVQSYVTLRVPLHVSYVFHSPVGAGGWQ
HFDLQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINEQGRLVVNFRTEARFR
GLFVTSHPASPLTSMIMCADHPGLTFNLSLVRSEPTYNQPMQQWTFVSDFAVRDYSGTYT
VKLVPCTAPPSVEYTLPPVCNPREPVTFDLDIRFQQVSDPVAAEFSLNTQMLLLSKRTLW
LSDGSMGFGQESDTAFSEGDVIYGRVMVDPVQNLGDSFICNIEKVFLCTGTDGYVPKYNP
DDFEYGCLADAPSLLYRFKIIDKAQPETQARTFGSISFNALLAVDDPQALALVRQPGSDG
FRLDSAALFQVSVGREWYIHTIYTVRSRDNANRGIGKRSVEYHQVTQHRRTLQTSSTRSR
RSADVPALAEEIGLENDRGTNILHIALDRSSQRQPRPKINVQNVVHPTVSTPRETAEDDL
LMIIGIVVGLLLTVLLLVLVVLLVRSRREKKGSEPPKGSSSTEPMMTHVVNSNDSSEV
NT seq
9357 nt
NT seq
+upstream
nt +downstream
nt
atgttttctcctgcctgcgagatgcggctctccggcggctcctgcttcacctgcttcttt
gtgctcgcactgacgctgactgacggctcctcagcgcagctttttgacagctttggactc
agctatggcttgagatcggagctgtctgaggatgccatactcgtggctaacaatggaata
cgggtccctttcggcaggtcagttttcgttgatcctgttaacgatttggtcatccaggtc
cagcccggagacaagtgcaccttaacagttctggataatgaccctctgtcacagagaccg
gggcagctgtctcctaaaaagttcccctgtgagtttggccccaacgatgtgaagtactcg
cacttcgggtccaggagtccgtccagagacagagtgcggctacaacttaggtacgacacg
cagagccacactgtgatcataccgttcatgatggaggtggaggtgatcttcactcagctg
gagattctgaccaaaaacatgcccctcgttgtggaaaagctgcttgggataagtaatcct
atcgataggaaaattctggagttcacatatgataggaatacatatcagtgcaaagtaacg
tctcttgccagtgtcagtgctttgcccaggtatggaaagctcattgatgaaggtaaacta
ggcaaaatgattgactgtgatgaatttgtcaggctgaacgttcgctaccagcacactttc
gcccaccgctcaccgaaccgagactatatcccaatgtacgtagaactacaagacaaggaa
agtaacgtcataaggcaggagtttttccaaattatggtgcgcattaaagagggggaggaa
aacactgcccccaaacccagctttgtggctatgatgatgatggaagttgatcagtttgtg
atgaccgctataactccggacatgctcgccgctgaggacgtggaatccccacctgatgac
ttaatctttaacattacctctcctctgtcttttgaggagggctacattgtgagcacagat
gacaggaatttgcccatcacgtccttctatcagggggatctgaaggatcttaaaatagcg
tacaagcctccgtctgtggattcggacagtgagagaattttccaaattgagtttgtggtc
gtagacacagagggagccgtctcagaccccttcgctttcatgatcgtggttaagcccatg
aacacgttggctccagttgtgactcgaaatacagggcagctgctgtatgagggccagtct
agaccgctgtccagtttgcagaacctgcagattagcgacgaggacaatttagatgatgtg
aaagtcacagtgatagatgggctgaggcatggggagctcaccgtgctgggctccaggaga
aaattcttcacgccggcagatcttgacctcggctctgtcatctaccagcacgacggcagc
gatacgtacagtgacaacatcattttccgcatgacagatggcagacatgaagtagagttc
cttttccccataactgtggtgccaactgatgatgagccgcctattatcaatgccaacaca
ggcttagtgctgtttaaaaaccagatgatgcctatttctgctttaatgctcagtgccgct
gatattgactctgaggactccaccatcaaatttattatggagcctcctttctcaactata
ggggaggtgctgctccgtcagtctgatgctccagaagatccatccacatggaggttcaat
tctgaagatgaaatgtatgagaaggcagtgacagagtggctccaacaagacattacagat
gggaagctgttttataggcacattgggcctcacaacaccgaagccgttatggatcagttc
gtcttccgagttcaagatgataatgacccaccgaatcagtctggggagagctcttttatt
attaaaattctccctattgatgacctcccgcctaagctttaccctggcaccaccttacag
ctgactgtacatgagtaccagctcacatactttcgcaagaaattcctacgttacacggat
ttggactccgaagacagggatttaaaatacaccatcactcagccaccaacagacacagat
accaacagccccggtatcctcggaaccatcgttttgactgagagtccaaatatggaggtc
acggagttcacacaagcacagataaaccaccataagatatcatacaagcctcctgatcta
gagctgggaataactccgcatgtggtgcagttccagtacacagttgaagatacagcagga
aacagtgtcgacggaacgttcaccattttcctgcagcctgtcgacaacaagcccccccaa
ataaccaacaccggcttcactgtgttggagaggggaactcatgtcatcacatactccgag
cttcataccacagaccccgacactgatagcaaaagaatatccttcacgctcacccagcct
cctacgcatggtcagctccaatacacgttcaccatcctcactaaaggggatttgttcaat
ctggacgatatttccaacggcaggatctcttacgttcacaatggagatgagtcaaccaat
gacttctttcaacttgatgtaagcgatgggatccatattgtcacaattactattaggata
actgtgaagcccgtcgatgatgaggttccaaccataagccttccagaaggtactatcggc
tcctacattgatgttttagagaatggagctacggagatcaccactaatgtcattcaagga
cgagatgaggacaccgatgacctcagactgacctttatagtggaggatcccccagtgttt
ggtgaaatactggtgaatggagtgccgtccaacagatttacgcaagcagacatcatcagt
ggcttagtagtctatgcgcacacaagtggagaaattggcctcaccacaaaagaagacttc
tttaatctgacgcttacagatatgtctgatgagtggactgtcggaggcaataaaatcaag
ggtgttcgagtgcaggtaactattttgccaatagacagccaagcccctgaggtgtttgta
ggcccccaattcagcgtgattgaaggtgagaaaaatgccattcagatattgcacataagc
gctgatgatattgacactcccaacgatgaccttttgtgcacgatcatcgttcagcctacg
tctggatacttggagaacatatcacctgctccagggtcagagaaatccaggtcaggaatt
gctattagtgcgttcaccatcaaagacatcaaacagaaccatatctactatgtacaaagc
attcacagaggagtggagccagttgaggacaggttcactttcagatgttctgacggcatc
aatttctcagagagacactttttccccattgtgataattccatccaatgatgaaaagcca
gagatccacatgagagagtttgtggtgatggaaggcatgaacgtggtgattgacactcct
attttgaatggcttggatgcagatattcctacagatgagttgacctttattatcactaaa
cccccaaaacatggctttattctaaatcagttaacgtctggcactgttccagtaacaaac
ttcactctagatcagataagagaggcctctagtattgtttatgagcatgatgattccgaa
accacagatgacagcttcactgttcttctcactgatggcaaattcacggtggaaaaaact
gtcattattatggtcatcccagtggacgacgaaactccaaggatggcaattaatgacggc
cttgaaatagagataggcgacatcaaagaaatcaacaacaaagttctaaaagccacagac
ctggattcagaggatagtacgctaacgtatgttatccgttatggtcccaatcagggaatt
ttacaaaggaggacgccacttggaacactagaaaacataacgatcggaatgaatttcaca
caaaatgatgttgaccagggtttgattttatatatccacaatggacaagaaggaatacgt
gacctcatcaaatttgatgtcactgatggcatcaacccactgattgacaggtacttctat
gtaacagttggtggaatagacatggtgttccctgacgtggttagcaaaggggtttctctg
aaagaaggtggaagagtgactctaaccacagacctgctcagcacaagtgacctcaacagc
ccagatgagcatctggtcttcaccatcactcgagctcctatgagaggccacctggagtgc
acggaccgccctggcatgcccatcacctctttcactcagctccagctagctggcaacaaa
gtctactacatccacactgcagatgatgaagttaagatggacagctttgagtttgaggtg
acggatggttacaaccccgtgttccggaccttccgtatctccataacagacgtggacaac
aaaaagcctgtggtcaccattcacgggctggttgttaacgagggtaagactaagttaata
accccttttgagttgaccgtggaggaccgggacactgttgacaggtttctgaagttcacc
atcacccaggtgcctgttcatgggaagcttctattcaacaacaccaggcctgtcaccacc
ttcaccaagcaggacctcaatgagaacatgatcagctataagcacgatggaacagagtct
gcatccgacagcttctccttcacggtcactgatggaacccacacagacttttacgtcttc
cccgacacagtttttgaaacgcgcaagccacaagtgatgaaaatcacaattctttctgtg
gacaatggcgttccacagattgtggttaacaagggtggtacgatgctgagaacgctgccc
actggtcacctgggcttcttgatcaccagtaaagctctgaaggctgaggacagagacagc
catcatggagccgtgacttttagagtcactgtgggtgcagagcacggctacctcatcgat
ctgggcaaaggaaacgccaccatcaccacgttcacacaagctgacattgatgacatgcac
gtatgctacgtacttcgagatggaaacaatgccaccagcgacaccttctatttctccatt
gaagacaatggaggcaacaagctgaagaaccagcagttccggctgacctgggcctggatc
tctctggagaaagagtactacctggtggatgaagaggccaaagtgcaggaggtggtgctg
aaacgcaggggctatctcggagaaacgtctttcgttagtattggtaccaaagatgggacg
gcagagaaggacaaagactttcgaggcaaggcccagaaacaagtccagttcaaccctggt
cagaccagcgccacgtggaaggtgcggatcctctccgacaatctgtatgaacagtctgaa
accttccagatcgttctctctgagcctgtgatgggggctctggagttccctcaggcagcc
acggtggagatagtggaccctggagatgagtccacagtgttcatcccttcggctacatac
tcaatagaggaggacattggagagcttctgattcctgtccgcaggtcaggggacgtcagt
caggagctgatggtcatctgtttcacacagcaaggcacagctactggcactgtccccacc
actgtgctgtcctactcggactacatctcgcgccccgaggagcacagcagcgtcctacgc
ttcgacagggacgagacggagaaagcctgccgtgtggtggtgatagatgactctctctac
gagccggaggaaagctttaacgtcaccctcagcatgccaatgggtggccggctgggtcag
gagttccacaccaccagagtcaccatcctgcctgactcagatgacgctccagtgttctat
tttggggatgtgcagtaccatgtggacgagagtgacggctatgtggaggttcgggtttgg
aggacaggatctgacctctctaagacgggcacggttactgtgcgctcccgaaaaactgac
cccgtttctgctgaagctggtgaggactatgtggggatcagtaagaatttggactttgct
ccaggcgtcaccatgcagacgttccgggtgaccatcctggacgacctgggtcagcctgtg
ttggagggtccagagaagtttgagctggtgctgcgtatgcccatgaacggcatcctggga
gagcccgggaaaagcaccatcttcatcaacgactctgtttcagacttgcctaaagttcag
ttccgagatgtgacatacacaggaaacgagaacgatgggaagattacggccatcatttac
cgcagcggtgacctgagctacaggtccagcgtacgctgctacagccgtcagggttcagcc
caggtcatgatggacttcaacgagaggcccaacacagacgcttccattatcactttctta
ccaggagaagtggagaagccatgtactctaattctagttgatgatacggagcatgaggaa
gtcgaggagctgaggttggtgctggggagccccaaaagcgagtctccgtttggggcgtcc
atcggagctcagaatgagacgcttatcaagataaaggatgatgctgacaaggccattatc
aggtttggggcgaccaaattcagcgtgagtgagcccactgagtctggacaggtctctgtg
gtgaagatccctgtgcagcgtgtaggggacacctccaaagtgtcggtggtccgcgtccat
accaaagatggctctgcgtcctctggagaagattaccacccagtgtcagaagacattgaa
tttgaggaaggggagacggagcacacggtggagattgagattctgtatgatggcctgcgc
gagatgagagaagcatttacggtccatctgaagccggacgagaacatggtggctgagatc
cagatgaccaaagccatcgtctacattgaggaaatgaacagcatggctgatgtgaccttc
cccgcagtgccagtggtcatatccctcctgcagtacgatgacaccagcagtgcccgagac
agccagccagctgccggctaccccgtcgtctgcgtcacagcttgcaaccccaagtacccg
gactttgaccgcaccggctccatttgtgcaggcgaacacatcaacgacacgctgacacga
taccggtggctcgtcagcgctcccacagggctggacggggtcaccagccccatgagggaa
gtggacttcgacactttcttcacctcctccaaaagcatcacgctggactctgtgtacttc
caggccggctcgcgggtgcagtgcgcagctagagcggtcaactccaacggggacgagggt
ctggagctcagcagctccattgtttccatcagcgtagaggagggtctgtgccagcctcga
gtgctgggcgcagtgggcgctgagcctttctctgccaaactccgttatactggaccagaa
gacctggatcacccaaatctcatcaaactgaccgtcaccatgccacacatagatgggatg
ctgcctgtggtgtccactcgtccactctccaacttcgagttgactctgagtccagacggg
acacgggtgggtaaccatcgctgctccaacctgctggactacaatgaggtgcgcacacgc
cacggtttcatcaccgaatccacccgcaacccagaggccatcggaggcacagcgccttac
cagtacagcgccaccctgaggggccagagcacactacgcttctacaggaacctccacctg
gaggcgtgcctgtgggagtttgtcagctattacgacatgtccgaactgctcagcgactgc
ggggggaccatcggcacagatgggcaggtgctgaatctggtgcagtcctatgtgaccctg
cgtgtgccgctgcatgtgtcctatgtgttccactccccggtgggtgcgggcggctggcag
cacttcgacctgcagtctgagcttaggctcacttttgtgtacgacactgccatcttgtgg
agggacggcatcggcagcccaccagaggcagagttacaaggagctctgtatcccacaagc
atgcgcatcaatgaacaaggccgtttggtggttaatttccgcacagaagcccgcttcagg
ggactgtttgtgacttcccaccctgcctcacctttgacctccatgataatgtgtgcggac
caccctgggctgacctttaacctcagcctggtgaggagtgagcccacctacaaccagccc
atgcagcagtggaccttcgtctctgacttcgctgtgagggattactcaggaacctataca
gtgaagcttgtgccctgcactgcacctccaagtgtggagtacactctgcccccagtgtgt
aatcccagagagcctgtcacctttgacctggacatacgcttccaacaggtgagcgaccca
gtagcagcagagttcagcctgaacacacagatgctgctgttatctaagagaaccctgtgg
ctgtcagatggctccatgggctttggacaagagagcgacactgcattctctgagggtgat
gttatctatggccgtgtcatggtggatcctgtacagaaccttggagactcattcatctgt
aacattgagaaggtgttcctctgtacgggaacagacggttatgtgccgaagtacaaccct
gacgactttgaatacggctgcctggcagatgctccatcgctgctgtacaggttcaagatc
attgacaaagctcagccagagactcaggccaggacgtttggtagcattagcttcaatgct
ctgctagctgttgacgaccctcaggctttggccttagtgaggcagccgggatcagatggc
tttaggctggattcagcagccctgtttcaggtatctgtgggcagggagtggtacatccac
accatctacaccgtccgctccagagacaatgctaaccgaggcatcggaaagaggagtgtg
gaatatcatcaagtaactcaacaccgccgcacacttcagaccagctccactcgatccaga
aggtccgccgatgtaccggctctggctgaggagatcggtttggagaacgatcgaggcacc
aacatcctgcatatcgctctggatcgcagcagccagcggcagcctcggcccaaaatcaac
gtccaaaacgtggtccatcctacagtgtcgacacccagagagaccgctgaggatgacctc
ttaatgatcataggaattgtggtgggtcttctcttgactgtcctccttctcgtgcttgtg
gttctgttggtacggtccagacgggagaagaagggcagtgagccaccaaaaggctccagc
agtacagagcccatgatgactcatgtcgtgaatagtaatgacagctctgaggtgtga
DBGET
integrated database retrieval system
