Colossoma macropomum (tambaqui): 118804592
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Entry
118804592 CDS
T09004
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118804592 (shoc2)
SSDB
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_13
LRR_At5g56370
LRR_5
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
118804592
NCBI-ProteinID:
XP_036421016
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MSSALGKDKDCKEKEPKPPSGKEREKEPKAPGSLGKEGKESKTKGKDAKDGKKDASGAPP
AVAFSVDNTIKRPNPAPGIRKKSSNAEVIKELSKCRDENSTRLDLSKRSIHLLPSSIKEL
TQLTELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLR
EIPAVVYRVTSLTTLYLRFNRITAVEKDIRNLAKLTMLSIRENKIKQLPAEIGELCNLIT
LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPRS
LAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNM
EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDIC
GLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ
LTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSK
LSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgctttaggcaaagacaaagactgcaaggagaaggagcccaaacctccgtcc
ggtaaggagcgggagaaggagccgaaggcacccggcagcttgggcaaagagggcaaggag
tccaaaaccaaagggaaagatgccaaagacgggaagaaagacgcgagcggcgcaccgcct
gccgtggccttctctgtggacaacacgataaaacggcccaacccggcgccgggcatccgc
aagaagtccagcaacgccgaggtgatcaaggagctcagcaagtgccgggacgagaactcg
acacgcctggacctgtccaagcgctccatccacctgctgccctcgtccatcaaggagctg
acacagctgactgagctttacctgtacagcaacaagctgcagagcctgccggcagaagtg
ggctgcctgtcgggcctggtgacgctcgccttgagcgagaactcgctcaccagcctgccc
gactcgctggacaacctgaagaagctgcgcatgctggacctgcggcacaacaagctgcgg
gagatcccggccgtggtgtaccgcgtcacctcgctcaccacgctgtacctgcgcttcaac
cgtatcaccgccgtcgagaaggacatccggaacctggccaagctcaccatgctcagcatc
cgcgagaacaagatcaagcagctgccggctgagattggcgaactgtgtaacctgatcact
ctggacgttgcccacaatcagctggagcatctcccgaaagagatcggcaactgcacacag
atcaccaatttggacttacagcacaacgagcttttggacctacctgagactataggcaat
ctgtcgagtataaaccgcctgggtctgcggtacaacaggctgtcagcaatcccccgatcg
ttagcaaagtgccgggagctggaagagctaaacctagaaaacaacaacatctctgtgcta
cctgagggcctgctctcgagcctggtgaacctgacaagtctgacgttggcacggaactgt
ttccagtcgtacccggtgggcggcccgtcgcagttctccaccatctactcgcttaacatg
gagcacaaccgcattaataaaatccctttcggcatcttctcccgtgccaaggtcctcagc
aagctcaacatgaaggataaccagctgacatcgttgccgctggacttcggcacgtggacc
agcatggttgagctgaatctggccaccaaccagctgaccaagatccctgaggatatctgc
ggccttgcatccctcgaggttctcatattgtccaataatcttctgaagaagttaccccat
ggaattggtaacttgcggaaactacgcgagctcgacttggaggagaacaagctggagtcc
cttccgaacgagatcgcctaccttaaagacctacagaaacttgtgttgaccaacaaccag
ttgaccacattgccaagaggtatcggtcacctgaccaacctgactcacctggggctggga
gagaacctcctgcagcacctacctgaggagattggcacactggagaacctggaggagctg
tacctgaacgacaaccccaacctgcacagcctgccgttcgagctggcgctgtgcagcaag
ctgtccatcatgagcatcgagaactgccccctcagccacctcccgccgcagatcgtcgct
ggaggcccttcgttcatcatccagtttctcaagatgcagggaccgtaccgcgccatggtg
taa
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