Colossoma macropomum (tambaqui): 118804742
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Entry
118804742 CDS
T09004
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118804742 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmao03021
]
118804742 (gtf2b)
Transcription machinery [BR:
cmao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
118804742 (gtf2b)
Prokaryotic type
Archaeal type
TFB
118804742 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
RB_B
Sigma70_r4
BRF2-like_C_cyclin_rpt
KIF9
Motif
Other DBs
NCBI-GeneID:
118804742
NCBI-ProteinID:
XP_036421268
LinkDB
All DBs
Position
Unknown
AA seq
316 aa
AA seq
DB search
MASTSRGDALPKVQCPNHPEAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNEKA
TKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATFIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaccagccgtggagatgctcttcccaaggtgcaatgccccaatcaccctgaa
gccatactggtggaggactacagggcaggggatatgatctgtccagaatgtggcctggtg
gtaggtgaccgtgttattgacgtcggctcagagtggaggacgttctcgaacgagaaagcc
accaaagacccttcacgtgttggtgacgctcagaatcctctcctgaatggaggagatctc
actaccatgatcagcaagggaacaggagccgcgagcttcgatgagttcggcaactccaag
taccagaaccgtagaaccatgagcagctctgacagagccatgctgaacgccttcaaagag
atcaccaccatggccgaccggatcaacttgcctaggaacatcgtagatcgcacaaataac
ttatttaagcaagtttatgagcagaagagccttaagggcaggagtaatgatgccatcgcc
tcagcctgcctgtacatcgcctgcagacaggagggagtccccagaacatttaaagagatc
tgtgccgtgtcccggatttcgaaaaaggagatcggccgatgctttaagctcatcctgaag
gctctggagacgagcgtggatctgataaccacaggagacttcatgtcccgcttctgctcc
aacctgggcctgcccaaacaggttcagatggctgccaccttcatcgctcggaaggcggtg
gagctggacctggtcccgggccgcagccccatctctgtggcagcagccgccatttacatg
gcctctcaggcctcagccgagaaaaagacgcagaaagaaattggagatatcgcaggtgtg
gctgatgtgaccatccgtcagtcgtacagactgatctaccctcgagccgccgacctcttc
cctccagacttcaaattcgacacaccggtggacaaactgcctcagctgtga
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