KEGG   Colossoma macropomum (tambaqui): 118804756
Entry
118804756         CDS       T09004                                 
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
  KO
K12842  U2-associated protein SR140
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118804756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmao03041]
    118804756
Spliceosome [BR:cmao03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118804756
 Complex B
    118804756
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID CTK3 RRM_7 SET_assoc DUF2299
Other DBs
NCBI-GeneID: 118804756
NCBI-ProteinID: XP_036421281
LinkDB
Position
Unknown
AA seq 971 aa
MADKTPGGAHKANSKALLESKLKAFSIGKMAVAKRTLSKKEQDELKKKEDEKAAAEIYEE
FLAAFEGGEGRVKTFVRGGIANASKEEAAADDKRGKLYKPKSRVLEAKSFLPLETPPQFL
ALDKRNASKKGEKEKKKSNLELFKEELKQIQEERDERHRLKGRVSRFEPVSAMEGRRSSD
GSSRRNRPSSVLDDSAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIM
WPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIP
PSMMEHTLPPPPSGLPFNAQPKERLKNPNAPMPPPPKNKEEFEKTLSQAIVKVVIPTERN
LLCLIHRMIEFVVREGPMFEAMIMNREINNPLYRFLFENQSPAHVYYRWKLYSILQGDSP
TKWKTDDFRLFKNGSYWRPPPLNPYLHGTPEDEECDDDDEEESSKKGSLKDDERDKLEEM
LRGLTPRRSDVAEAMLFCLTHADAAEEIVECVAESLSILKTPLPKKIARLYLVSDVLYNS
SAKVSNASYYRKFFEAKLCQIFSDLNATFKTIQGHLQSEHFKQRVMSCFRAWEDWAVYPD
PFLIKLQNIFLGLVSLDPDKETPTELVSEQPVEQVEDIDGAPIVEEELDGAPLEDVDGTP
IDGAPLDGAPMMDDLDGVPIKGTEDELDGVPLDGPKPAFKMAPSKWEEVDGAALEAQAVT
TSKWEIFELPEESEKTNESRKTHETDVKETLKSVYSTEQPSHSQPVKEEYQDSKSAKLSE
MSEEKRAKLREIELKVMKFQDELESGKRPKKSGQSIQEQVELYRDKLLQREKEKEVENKE
KEKEKKEKDKAEVTHKEKEKEESSSNRKEKKRRHSPSPSPTRSSSSRRGRSPSPRSERSD
RSYTKDSSRSSYKDSPRDSSRKSSKRSPSPPVTPKRSRRSRSRTPKKSSKKSRSRSRSPH
RSHKKSKKSKH
NT seq 2916 nt   +upstreamnt  +downstreamnt
atggcggacaaaacgccaggcggggctcataaggccaactcgaaggctttgctggaaagc
aagttgaaagccttcagcattggcaagatggctgtggctaaaagaaccctgagcaaaaag
gagcaagatgagctcaagaagaaggaggatgaaaaagcagctgcagaaatctatgaggaa
ttcctcgctgcctttgaaggaggtgaaggcagagtcaagacgtttgtccgagggggcatc
gctaatgccagcaaagaggaagctgcagctgatgataagagaggaaagctctacaaacca
aaatcaagagttttggaggccaaaagttttctgcccctggaaacacctccacagtttctt
gcgttagacaaacgtaacgcgtcaaagaaaggagagaaagaaaagaaaaagagcaacctt
gaacttttcaaagaggagcttaaacagatccaggaggagcgtgatgaacgccaccggttg
aaggggagagtcagtagatttgagcctgtgtcagccatggagggaagaagatcgtcggat
ggttcttcacgaagaaaccgtccgtccagtgttttggatgactctgctccgggctcacac
gacgttggtgacccatcaaccacaaacctttacttgggaaatataaatcctcagatgaat
gaggagatgctctgtcaggagtttggccgctatggtcctctggccagtgtgaagatcatg
tggcccaggacggatgaggagagggccagggagaggaactgtggctttgtcgcattcatg
acaaggagagatgcagaacgagcgcttaaacacttaaatggaaaaatgataatgaacttt
gaaatgaaactgggatggggcaaaggcgtgccaattccacctcaccccatttacattccc
ccctccatgatggagcacactcttccccctccgccctccggcctgcccttcaacgctcag
cccaaagagaggctgaagaacccaaacgctccaatgcctcctccgcccaagaacaaagag
gagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaat
ttgctctgtctcatccaccgaatgatcgagtttgtggtgcgtgagggacccatgtttgag
gccatgatcatgaacagagaaatcaacaatcctttatacaggtttttatttgagaatcag
agcccagctcatgtgtattacaggtggaagctgtattccatactacagggagattctcca
actaaatggaagacagatgactttaggttgtttaagaacggctcttattggcggccgcct
cctctaaacccttacctgcacggcactcctgaggacgaggagtgtgatgatgacgacgaa
gaggaaagcagcaagaagggatccctgaaggacgatgagagagacaagctggaggagatg
ctccgtggcctcaccccgaggaggagtgatgttgctgaggccatgctgttctgcctcacc
cacgcagacgcagccgaggagatcgtggaatgtgtcgctgaatctctgtccatccttaaa
actccactcccgaaaaagattgcgaggttgtatttggtgtcagatgtcttgtataactcc
tccgctaaagtctctaatgcgtcctactacagaaaattcttcgaagcaaaactctgccag
atattctctgatctcaacgccaccttcaagacgatacagggccacttgcagtcggagcat
tttaagcaacgagtgatgtcgtgtttccgggcatgggaggactgggcggtgtatcctgat
ccgttcctcatcaaactccagaacattttcctgggactcgtcagtctggatccagacaaa
gagacccccacagagctggtgtctgaacagcccgttgaacaggtggaggatatagatggc
gcccctattgtggaggaggagctggacggcgctcctctggaggacgtcgacggcactccg
atcgacggagctcctctggatggagctccaatgatggacgacctggatggagttcccata
aagggcacggaggatgagctggacggagttcccttagatggaccaaaaccagcttttaag
atggctccatcaaaatgggaggaagtggatggagcggctctggaggctcaagctgtaacc
acttcaaaatgggaaatctttgaactgccagaagagtctgaaaagactaacgagagcagg
aaaacacatgaaaccgacgtcaaagagactttgaagagcgtctactctacagaacagcca
tctcactcccagcctgttaaagaagaataccaagactcaaaatccgccaagctgtcagag
atgagtgaggagaagcgcgctaaactgcgggaaatcgagctcaaagtgatgaagttccag
gatgagctggagtcggggaaacggccgaaaaaatcaggacagagtattcaagaacaagtg
gagctctacagggacaagttattgcagagggaaaaggaaaaagaggtggagaataaagag
aaggagaaagagaaaaaagaaaaagacaaagccgaagtcacgcacaaagagaaggaaaaa
gaggagtcttcatccaacagaaaagaaaagaaacgcaggcacagtccctcccccagtccc
actcgcagtagctccagccgtcgcggccgctccccgtctccacggtccgagcgctcagac
aggtcctacaccaaggacagctcacggtcctcttataaagactcgccacgagacagtagc
aggaaatcctccaaaaggtcaccttccccacctgtaacacccaaacgttcccgcagatcc
agatcgcgaacgcccaagaaatcctccaagaaatccaggtcgcgttcccgatcgccacac
cgttctcacaagaaatccaaaaagagcaagcactga

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