Colossoma macropomum (tambaqui): 118805323
Help
Entry
118805323 CDS
T09004
Symbol
atg4db
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04136
Autophagy - other
cmao04140
Autophagy - animal
cmao04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
118805323 (atg4db)
04140 Autophagy - animal
118805323 (atg4db)
04136 Autophagy - other
118805323 (atg4db)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmao01002
]
118805323 (atg4db)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmao04131
]
118805323 (atg4db)
03029 Mitochondrial biogenesis [BR:
cmao03029
]
118805323 (atg4db)
Peptidases and inhibitors [BR:
cmao01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
118805323 (atg4db)
Membrane trafficking [BR:
cmao04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
118805323 (atg4db)
Mitochondrial biogenesis [BR:
cmao03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118805323 (atg4db)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
118805323
NCBI-ProteinID:
XP_036421941
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MSAGWSDDADPPDDLASFEVLSKPGPSDLKEYPQHVEAAQDKAKLKRRLMSAWNNVKYGG
WSLKSKPRLSKSSPVCLLGHMHQLSSEGDREQFRRAFSSLLWLTYRKGFAPVGGSSLTSD
SGWGCMLRTAQMLLAQGLLIHLMPEGWTWPGAHHQTKDDLDVKAPRQSGQRSDLVKQWRR
RSEGSPFDNVEDTEDSTHRHLVTWFGDTPTAPFSLHKLVELGKTSGKRAGDWYGPSIAAH
ILRKAVAASEVPNLEVYVAQDCTVYVGDVVRLCEESQSQCNKSVIILVPVRLGGDAFNPA
YVECVKKLLQLKCCIGIIGGKPKHSLYFVGFQDDKLLYLDPHLCQATVDVNQDNFPLESF
HCKAARKMAFHRMDPSCTLGFYAGNRKDFDSLCTDVTMALTSSVGTYPIFTFVEGSGQDE
HGEEAFTSESVVHIAAKDNQKRSNKRSSVDDFVML
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgggtggtctgatgatgcagatcccccagatgatttggcatcatttgaggtc
ctctcaaaacctggaccttctgacctgaaagagtacccgcagcatgtggaggcagcacag
gacaaagccaagctcaaacgcaggctcatgtctgcatggaacaatgtgaaatatggaggc
tggtcactgaagtcaaagccccgcctcagtaagagctcccctgtgtgtctgctgggccac
atgcaccagcttagctctgaaggtgaccgtgagcagtttcggcgggcgttctcctcactg
ctgtggctgacctataggaaaggttttgctcctgtgggcggctcttctctcacctcagac
agcggctggggctgcatgctccgcactgcgcagatgttgctcgctcagggactgctcata
cacctgatgccagagggctggacatggccgggtgcccatcaccaaaccaaagacgacctg
gatgtcaaagccccgcggcagtcaggacagagaagtgacctggtcaaacagtggaggaga
cgcagtgagggcagcccgttcgacaatgttgaggacacagaggacagcacacaccggcac
ctggtaacctggtttggagacacacccactgctcctttcagcctgcacaagctggtggag
ctgggcaagacctcggggaaacgggccggagactggtatggcccgtccatcgcagcacac
atactccgtaaggctgtagcagcatctgaagtccctaatctggaggtgtatgtagcgcag
gactgcactgtttatgtaggagatgttgtgagattgtgtgaggaatctcagtctcagtgt
aataagtctgttattatactggtgcctgtgagacttggtggagatgccttcaatcctgcc
tatgtggaatgtgtgaagaaacttcttcagctgaaatgctgcattggaatcattggagga
aagccaaagcattctttgtattttgttggattccaagatgacaagctgctatatctggat
cctcatttatgtcaagccactgtagatgtcaaccaagataacttccctttggagtcgttc
cactgcaaagctgcaagaaagatggcctttcaccgcatggaccccagctgtactctgggg
ttctacgctggaaacaggaaggactttgactctctctgcactgacgtcaccatggctctg
acctcatctgttgggacgtaccccatcttcacctttgtggaaggcagtgggcaggatgag
catggggaagaagcgtttacctctgagtccgtagtccacatcgcggccaaagacaaccag
aaacggagcaataagcgcagcagcgtggatgactttgtaatgctttga
DBGET
integrated database retrieval system
