KEGG   Colossoma macropomum (tambaqui): 118805433
Entry
118805433         CDS       T09004                                 
Symbol
hdac1
Name
(RefSeq) histone deacetylase 1 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
cmao  Colossoma macropomum (tambaqui)
Pathway
cmao03082  ATP-dependent chromatin remodeling
cmao03083  Polycomb repressive complex
cmao04110  Cell cycle
cmao04330  Notch signaling pathway
cmao04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cmao00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    118805433 (hdac1)
   03083 Polycomb repressive complex
    118805433 (hdac1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    118805433 (hdac1)
   04350 TGF-beta signaling pathway
    118805433 (hdac1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    118805433 (hdac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmao03036]
    118805433 (hdac1)
Enzymes [BR:cmao01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     118805433 (hdac1)
Chromosome and associated proteins [BR:cmao03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     118805433 (hdac1)
   HDAC complexes
    Sin3A-HDAC complex
     118805433 (hdac1)
    BRAF-HDAC complex
     118805433 (hdac1)
    REST complex
     118805433 (hdac1)
    SHIP complex
     118805433 (hdac1)
    MiDAC complex
     118805433 (hdac1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     118805433 (hdac1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    118805433 (hdac1)
  Chromatin remodeling factors
   NuRD complex
    118805433 (hdac1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 118805433
NCBI-ProteinID: XP_036422102
LinkDB
Position
Unknown
AA seq 484 aa
MALSSQGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSTIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQVIPEDAVQEDSGDEEDDPDKRIPIRAHDKRIACDEEF
SDSEDEGQGGRRNAANYKKSKRVKTEEDKDGEEKKGEQTDVKEEEKTPEEKMDTKGPKEE
LKTT
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggcgctgagttcgcaaggaacaaagaagaaagtttgctattactatgacggtgatatt
gggaactactactatggccagggccatcccatgaagccccaccgaatccgtatgactcac
aaccttctcttgaactatgggctgtacaggaagatggagatctataggccgcacaaagcc
aatgctgaagagatgaccaagtatcacagtgacgactatattaagttcttgcgttccatc
cgcccagataacatgtccgagtacagcaagcagatgcagagatttaatgtcggtgaagac
tgcccggtgtttgatggcttatttgagttctgtcagctttcaacaggcggctctgttgct
ggagctgtaaaattaaacaagcagcagacagacatcgctattaactgggcgggtggcctt
caccatgccaagaagtcggaggcttctggtttctgctatgtcaatgacattgtcttggcc
atcttggagctgctcaaataccatcaaagagtgctgtacattgatattgacatccaccat
ggtgatggagttgaggaggccttctacaccacagaccgcgtcatgacagtgtctttccac
aagtatggcgagtacttccctggcacaggtgacctcagagatattggtgcagggaagggc
aaatactacgctgtgaactacccgctcagggatgggattgatgatgaatcttatgaagct
atattcaaacctatcatggccaaagtgatggagatgtaccaacccagtgctgtagttctt
cagtgtggtgctgattctttgtctggggacagattgggctgttttaacctcaccatcaaa
ggccatgctaagtgtgtcgaatacatgaagagctttaaccttcctttgttgatgctggga
ggaggcggctacaccattaggaacgtggctcgctgctggacctacgagacagccgtagcc
ctggacagcactattcccaatgagcttccatacaatgactacttcgagtattttggaccc
gacttcaagctccacatcagcccatccaacatgaccaaccagaacacaaatgactaccta
gagaaaatcaagcagcgtctgttcgagaacctgcgcatgttgcctcatgctcctggagtg
cagatgcaggtgatcccagaggatgctgtgcaggaggacagtggtgatgaggaagatgac
ccagacaaacgcattcctatccgtgctcatgataagcggatagcctgcgacgaagagttc
tcagattctgaggatgaaggtcaaggcggccgcagaaacgcagcaaactacaagaagtct
aaacgggtgaagactgaagaagacaaggatggggaagagaagaaaggtgagcagacagac
gtgaaggaggaggagaaaactccagaggagaaaatggacacaaaggggccaaaagaagag
ttgaaaacaacttga

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