Colossoma macropomum (tambaqui): 118805489
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Entry
118805489 CDS
T09004
Symbol
dync1i2a
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04145
Phagosome
cmao04814
Motor proteins
cmao05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118805489 (dync1i2a)
09142 Cell motility
04814 Motor proteins
118805489 (dync1i2a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118805489 (dync1i2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmao03036
]
118805489 (dync1i2a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cmao04812
]
118805489 (dync1i2a)
Chromosome and associated proteins [BR:
cmao03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
118805489 (dync1i2a)
Cytoskeleton proteins [BR:
cmao04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
118805489 (dync1i2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Dynein_IC2
Beta-prop_EML
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
118805489
NCBI-ProteinID:
XP_036422197
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEEERKKKEAEQLKEPVTLQDDSDLEKKRREAE
ALLQSMGITSDVPVVPAPMSPTAKSVGTPSEAGSQDSGDGATGPRTLHWDSDPSTLLLHS
ELGRGPVKLGMAKVTHVDFPPKEVVSYTKETQTPTMSEQKEEEEEEEEELAPAEPASEVE
KETPVQKQEEEAPPHELTEEEKLQILHSEEFMDFFDHSTRIIERALSEHVDVFFDYSGRD
LEEKEGEMQAGAKLSLNRQFMDERWSKHRVVTCLDWSPQYPELLVASYNNNEEAPHEPDG
VALVWNMKYKKTTPEYVFHCQSAVMSAAFVKFHPNLVVGGTYSGQIVLWDNRSNKRTPVQ
RTPLSASAHTHPVYCVNVVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSMELVFKQSKA
VAVTSMSFPLGDVNNFVVGSEDGSVYTACRHGSKAGISEMFEGHHGPITGIHCHTAAGPV
DFSHLFLTSSFDWTVKLWSTKNNKPLYSFEDNSDYVYDVMWSPVHPALFACVDGVGHLDL
WNLNNDTEVPTASITVEGTPALNRLRWAQSGREIAVGDSDGQILIYDVGEQIAVPRNDEW
TRFVRTLAEINENRDDAEELAAQRIPS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaagagtgagctgaaggccgaattagagcgaaagaagcagcggcttgcacaa
atcagggaagaaaagaagagaaaagaagaggaacgcaagaagaaagaggcagagcagctg
aaagaacccgtaacactgcaggatgactctgatctggaaaagaagaggagagaggctgaa
gcactgctgcagagcatgggaatcacgtctgatgtccctgtggttcctgcaccaatgtct
cccactgccaaatctgtgggcactccgagtgaggcaggtagccaggactcaggcgatggc
gccacaggacccaggactctccactgggactctgatccttctacactactgcttcactcc
gagctggggcgaggcccggtgaaactgggcatggcaaaggtgacccatgtggacttccct
cccaaagaggtggtgtcctacaccaaggagactcaaacacccaccatgagcgagcagaaa
gaggaggaagaggaggaagaagaagagctagctcctgcagagcctgcatcggaggtggag
aaggagactccagtgcagaagcaagaggaagaagcaccccctcatgagctgactgaggaa
gagaagctgcagatcctacactctgaggagttcatggatttctttgaccacagtacgcgc
atcattgagagagctctgtctgaacatgtggacgttttctttgactacagcggccgtgac
ctagaggagaaggagggtgagatgcaggctggagcgaagctgtctctgaacagacagttt
atggatgagcgctggtccaagcacagggtggtcacctgcctggactggtctccacagtat
cctgagctactggtcgcctcctacaacaacaacgaggaggctcctcatgagcctgatgga
gtggctttggtctggaacatgaagtacaagaaaactacgccagagtatgtcttccactgc
cagtctgcagtgatgtcagcagcatttgttaaattccatcctaacctggtggtaggtggt
acatactcaggacagattgtgctgtgggacaataggagtaacaaacggacccctgtccag
aggaccccactctcagcctctgctcacacgcatcctgtttattgtgtgaatgttgtcggc
actcaaaatgctcacaacctgatcagcatctccactgatggtaaaatgtgctcatggagt
ctggacatgttgtcccagcctcaggacagtatggagttggtgtttaagcagtctaaggca
gtggcagtcacctccatgtccttccccctgggtgacgtcaataactttgtggtaggcagt
gaagacggatcagtctacacagcctgtcggcatggcagtaaagcaggtatcagtgagatg
tttgagggtcaccatggaccaatcactggtatccactgccacacagcagctggccctgta
gacttctcccatctgttcctcacgtcttcctttgactggactgtcaaactctggagcacc
aagaataataagcctctgtactcgtttgaggataactctgactacgtgtacgatgtgatg
tggtctcctgttcaccctgctctgtttgcctgtgtggatggagtcggacatctggacctg
tggaacctcaacaatgacacagaggtccccactgcaagtattacagtggaagggacccct
gctctgaacaggctgaggtgggcacagtcaggccgggagattgcagtgggagactctgat
ggacagattctcatctatgatgttggagaacagattgctgtgccacggaacgatgagtgg
acacgctttgtgaggacactggcagagatcaacgaaaaccgagatgacgctgaggagctg
gcggcccaacgaatcccgtcctaa
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integrated database retrieval system
